Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0376
(831 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M33950-1|AAA28746.1| 260|Drosophila melanogaster protein ( D.me... 170 2e-42
AY122197-1|AAM52709.1| 260|Drosophila melanogaster LD45889p pro... 170 2e-42
AE013599-2982|AAS64796.1| 260|Drosophila melanogaster CG9193-PB... 170 2e-42
AE013599-2981|AAF57493.1| 260|Drosophila melanogaster CG9193-PA... 170 2e-42
AE014134-3147|AAF53835.1| 255|Drosophila melanogaster CG10262-P... 114 1e-25
AB195794-1|BAE94851.1| 255|Drosophila melanogaster proliferatin... 114 1e-25
BT021268-1|AAX33416.1| 216|Drosophila melanogaster RE50044p pro... 114 2e-25
AY167137-3|AAO17673.1| 36|Drosophila melanogaster PCNA protein. 58 1e-08
AE014298-2710|AAS65404.1| 715|Drosophila melanogaster CG32549-P... 31 2.6
AE014297-4235|AAF56793.2| 5106|Drosophila melanogaster CG1842-PA... 31 2.6
>M33950-1|AAA28746.1| 260|Drosophila melanogaster protein (
D.melanogaster proliferatingcell nuclear antigen (PCNA)
gene, complete cds. ).
Length = 260
Score = 170 bits (413), Expect = 2e-42
Identities = 99/176 (56%), Positives = 121/176 (68%), Gaps = 4/176 (2%)
Frame = +3
Query: 255 AMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADN 434
AMDNSHVSLVSLTLR+DGFDK+RCDRN+SMGMNLGSM+KILKCA ++D VT+KAQDNAD
Sbjct: 39 AMDNSHVSLVSLTLRSDGFDKFRCDRNLSMGMNLGSMAKILKCANNEDNVTMKAQDNADT 98
Query: 435 VTFVFESPNQEKVSDYEMKLMNLDLNI*VFQRLNTAALFACQV-LNLLESAGISHSL--- 602
VT +FES NQEKVSDYEMKLMNLD + F+C V + +E A I L
Sbjct: 99 VTIMFESANQEKVSDYEMKLMNLDQEHLGIPETD----FSCVVRMPAMEFARICRDLAQF 154
Query: 603 ENQW*FHAPKKE*KFSATGDIGSANVKLGPXRFY*PRGKKAVVIEMGRARQLLTFA 770
K+ KFSA+GD+G+AN+KL + ++AV+IEM + LTFA
Sbjct: 155 SESVVICCTKEGVKFSASGDVGTANIKLAQTGSV-DKEEEAVIIEM-QEPVTLTFA 208
Score = 61.7 bits (143), Expect = 1e-09
Identities = 28/38 (73%), Positives = 35/38 (92%)
Frame = +1
Query: 142 MFEARLLRSSILKKVLEAIKDLLTQATFDCYDNGIQLQ 255
MFEARL +++ILKK+L+AIKDLL +ATFDC D+GIQLQ
Sbjct: 1 MFEARLGQATILKKILDAIKDLLNEATFDCSDSGIQLQ 38
>AY122197-1|AAM52709.1| 260|Drosophila melanogaster LD45889p
protein.
Length = 260
Score = 170 bits (413), Expect = 2e-42
Identities = 99/176 (56%), Positives = 121/176 (68%), Gaps = 4/176 (2%)
Frame = +3
Query: 255 AMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADN 434
AMDNSHVSLVSLTLR+DGFDK+RCDRN+SMGMNLGSM+KILKCA ++D VT+KAQDNAD
Sbjct: 39 AMDNSHVSLVSLTLRSDGFDKFRCDRNLSMGMNLGSMAKILKCANNEDNVTMKAQDNADT 98
Query: 435 VTFVFESPNQEKVSDYEMKLMNLDLNI*VFQRLNTAALFACQV-LNLLESAGISHSL--- 602
VT +FES NQEKVSDYEMKLMNLD + F+C V + +E A I L
Sbjct: 99 VTIMFESANQEKVSDYEMKLMNLDQEHLGIPETD----FSCVVRMPAMEFARICRDLAQF 154
Query: 603 ENQW*FHAPKKE*KFSATGDIGSANVKLGPXRFY*PRGKKAVVIEMGRARQLLTFA 770
K+ KFSA+GD+G+AN+KL + ++AV+IEM + LTFA
Sbjct: 155 SESVVICCTKEGVKFSASGDVGTANIKLAQTGSV-DKEEEAVIIEM-QEPVTLTFA 208
Score = 61.7 bits (143), Expect = 1e-09
Identities = 28/38 (73%), Positives = 35/38 (92%)
Frame = +1
Query: 142 MFEARLLRSSILKKVLEAIKDLLTQATFDCYDNGIQLQ 255
MFEARL +++ILKK+L+AIKDLL +ATFDC D+GIQLQ
Sbjct: 1 MFEARLGQATILKKILDAIKDLLNEATFDCSDSGIQLQ 38
>AE013599-2982|AAS64796.1| 260|Drosophila melanogaster CG9193-PB,
isoform B protein.
Length = 260
Score = 170 bits (413), Expect = 2e-42
Identities = 99/176 (56%), Positives = 121/176 (68%), Gaps = 4/176 (2%)
Frame = +3
Query: 255 AMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADN 434
AMDNSHVSLVSLTLR+DGFDK+RCDRN+SMGMNLGSM+KILKCA ++D VT+KAQDNAD
Sbjct: 39 AMDNSHVSLVSLTLRSDGFDKFRCDRNLSMGMNLGSMAKILKCANNEDNVTMKAQDNADT 98
Query: 435 VTFVFESPNQEKVSDYEMKLMNLDLNI*VFQRLNTAALFACQV-LNLLESAGISHSL--- 602
VT +FES NQEKVSDYEMKLMNLD + F+C V + +E A I L
Sbjct: 99 VTIMFESANQEKVSDYEMKLMNLDQEHLGIPETD----FSCVVRMPAMEFARICRDLAQF 154
Query: 603 ENQW*FHAPKKE*KFSATGDIGSANVKLGPXRFY*PRGKKAVVIEMGRARQLLTFA 770
K+ KFSA+GD+G+AN+KL + ++AV+IEM + LTFA
Sbjct: 155 SESVVICCTKEGVKFSASGDVGTANIKLAQTGSV-DKEEEAVIIEM-QEPVTLTFA 208
Score = 61.7 bits (143), Expect = 1e-09
Identities = 28/38 (73%), Positives = 35/38 (92%)
Frame = +1
Query: 142 MFEARLLRSSILKKVLEAIKDLLTQATFDCYDNGIQLQ 255
MFEARL +++ILKK+L+AIKDLL +ATFDC D+GIQLQ
Sbjct: 1 MFEARLGQATILKKILDAIKDLLNEATFDCSDSGIQLQ 38
>AE013599-2981|AAF57493.1| 260|Drosophila melanogaster CG9193-PA,
isoform A protein.
Length = 260
Score = 170 bits (413), Expect = 2e-42
Identities = 99/176 (56%), Positives = 121/176 (68%), Gaps = 4/176 (2%)
Frame = +3
Query: 255 AMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADN 434
AMDNSHVSLVSLTLR+DGFDK+RCDRN+SMGMNLGSM+KILKCA ++D VT+KAQDNAD
Sbjct: 39 AMDNSHVSLVSLTLRSDGFDKFRCDRNLSMGMNLGSMAKILKCANNEDNVTMKAQDNADT 98
Query: 435 VTFVFESPNQEKVSDYEMKLMNLDLNI*VFQRLNTAALFACQV-LNLLESAGISHSL--- 602
VT +FES NQEKVSDYEMKLMNLD + F+C V + +E A I L
Sbjct: 99 VTIMFESANQEKVSDYEMKLMNLDQEHLGIPETD----FSCVVRMPAMEFARICRDLAQF 154
Query: 603 ENQW*FHAPKKE*KFSATGDIGSANVKLGPXRFY*PRGKKAVVIEMGRARQLLTFA 770
K+ KFSA+GD+G+AN+KL + ++AV+IEM + LTFA
Sbjct: 155 SESVVICCTKEGVKFSASGDVGTANIKLAQTGSV-DKEEEAVIIEM-QEPVTLTFA 208
Score = 61.7 bits (143), Expect = 1e-09
Identities = 28/38 (73%), Positives = 35/38 (92%)
Frame = +1
Query: 142 MFEARLLRSSILKKVLEAIKDLLTQATFDCYDNGIQLQ 255
MFEARL +++ILKK+L+AIKDLL +ATFDC D+GIQLQ
Sbjct: 1 MFEARLGQATILKKILDAIKDLLNEATFDCSDSGIQLQ 38
>AE014134-3147|AAF53835.1| 255|Drosophila melanogaster CG10262-PA
protein.
Length = 255
Score = 114 bits (275), Expect = 1e-25
Identities = 56/144 (38%), Positives = 84/144 (58%)
Frame = +3
Query: 255 AMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADN 434
+MDNSHVSLV+L+L +D F+K+ CDRN+S+G++L S+ K+LKCA D VTIKA D +
Sbjct: 39 SMDNSHVSLVALSLASDCFEKFHCDRNVSLGLDLKSLGKVLKCANSDDAVTIKAVDRPEK 98
Query: 435 VTFVFESPNQEKVSDYEMKLMNLDLNI*VFQRLNTAALFACQVLNLLESAGISHSLENQW 614
+T FES +E+ +DYE+KL+NLD + + + +
Sbjct: 99 ITLSFESDGKERTADYELKLLNLDQDHMEIPKKDYTCFIQLPSSEFARICRDMSMFDESL 158
Query: 615 *FHAPKKE*KFSATGDIGSANVKL 686
K +F A GD+G+AN++L
Sbjct: 159 TIACSSKGIRFLAKGDLGTANIQL 182
Score = 66.9 bits (156), Expect = 3e-11
Identities = 25/47 (53%), Positives = 39/47 (82%)
Frame = +2
Query: 509 EHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKVL 649
+H+ IP+ +Y+C I++PSSEFARICRD+S F ES+ I+C+ +G++ L
Sbjct: 124 DHMEIPKKDYTCFIQLPSSEFARICRDMSMFDESLTIACSSKGIRFL 170
Score = 48.4 bits (110), Expect = 1e-05
Identities = 18/38 (47%), Positives = 31/38 (81%)
Frame = +1
Query: 142 MFEARLLRSSILKKVLEAIKDLLTQATFDCYDNGIQLQ 255
M EARL ++ +LKK+++A+K+++ Q T DC +NG++LQ
Sbjct: 1 MLEARLSQTLLLKKIVDALKEIIAQGTLDCSENGLELQ 38
>AB195794-1|BAE94851.1| 255|Drosophila melanogaster proliferating
cell nuclear antigen2 protein.
Length = 255
Score = 114 bits (275), Expect = 1e-25
Identities = 56/144 (38%), Positives = 84/144 (58%)
Frame = +3
Query: 255 AMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADN 434
+MDNSHVSLV+L+L +D F+K+ CDRN+S+G++L S+ K+LKCA D VTIKA D +
Sbjct: 39 SMDNSHVSLVALSLASDCFEKFHCDRNVSLGLDLKSLGKVLKCANSDDAVTIKAVDRPEK 98
Query: 435 VTFVFESPNQEKVSDYEMKLMNLDLNI*VFQRLNTAALFACQVLNLLESAGISHSLENQW 614
+T FES +E+ +DYE+KL+NLD + + + +
Sbjct: 99 ITLSFESDGKERTADYELKLLNLDQDHMEIPKKDYTCFIQLPSSEFARICRDMSMFDESL 158
Query: 615 *FHAPKKE*KFSATGDIGSANVKL 686
K +F A GD+G+AN++L
Sbjct: 159 TIACSSKGIRFLAKGDLGTANIQL 182
Score = 66.9 bits (156), Expect = 3e-11
Identities = 25/47 (53%), Positives = 39/47 (82%)
Frame = +2
Query: 509 EHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKVL 649
+H+ IP+ +Y+C I++PSSEFARICRD+S F ES+ I+C+ +G++ L
Sbjct: 124 DHMEIPKKDYTCFIQLPSSEFARICRDMSMFDESLTIACSSKGIRFL 170
Score = 48.4 bits (110), Expect = 1e-05
Identities = 18/38 (47%), Positives = 31/38 (81%)
Frame = +1
Query: 142 MFEARLLRSSILKKVLEAIKDLLTQATFDCYDNGIQLQ 255
M EARL ++ +LKK+++A+K+++ Q T DC +NG++LQ
Sbjct: 1 MLEARLSQTLLLKKIVDALKEIIAQGTLDCSENGLELQ 38
>BT021268-1|AAX33416.1| 216|Drosophila melanogaster RE50044p
protein.
Length = 216
Score = 114 bits (274), Expect = 2e-25
Identities = 56/143 (39%), Positives = 83/143 (58%)
Frame = +3
Query: 258 MDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNV 437
MDNSHVSLV+L+L +D F+K+ CDRN+S+G++L S+ K+LKCA D VTIKA D + +
Sbjct: 1 MDNSHVSLVALSLASDCFEKFHCDRNVSLGLDLKSLGKVLKCANSDDAVTIKAVDRPEKI 60
Query: 438 TFVFESPNQEKVSDYEMKLMNLDLNI*VFQRLNTAALFACQVLNLLESAGISHSLENQW* 617
T FES +E+ +DYE+KL+NLD + + + +
Sbjct: 61 TLSFESDGKERTADYELKLLNLDQDHMEIPKKDYTCFIQLPSSEFARICRDMSMFDESLT 120
Query: 618 FHAPKKE*KFSATGDIGSANVKL 686
K +F A GD+G+AN++L
Sbjct: 121 IACSSKGIRFLAKGDLGTANIQL 143
Score = 66.9 bits (156), Expect = 3e-11
Identities = 25/47 (53%), Positives = 39/47 (82%)
Frame = +2
Query: 509 EHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKVL 649
+H+ IP+ +Y+C I++PSSEFARICRD+S F ES+ I+C+ +G++ L
Sbjct: 85 DHMEIPKKDYTCFIQLPSSEFARICRDMSMFDESLTIACSSKGIRFL 131
>AY167137-3|AAO17673.1| 36|Drosophila melanogaster PCNA protein.
Length = 36
Score = 58.0 bits (134), Expect = 1e-08
Identities = 26/36 (72%), Positives = 33/36 (91%)
Frame = +1
Query: 142 MFEARLLRSSILKKVLEAIKDLLTQATFDCYDNGIQ 249
MFEARL +++ILKK+L+AIKDLL +ATFDC D+GIQ
Sbjct: 1 MFEARLGQATILKKILDAIKDLLNEATFDCSDSGIQ 36
>AE014298-2710|AAS65404.1| 715|Drosophila melanogaster CG32549-PA,
isoform A protein.
Length = 715
Score = 30.7 bits (66), Expect = 2.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -1
Query: 636 PSLVHEITIDSPNCERSRQILANSELGMRIVQLYSVSGIP 517
PS ++ I I +PNC+RSR+ N L L + P
Sbjct: 69 PSRIYPIHIGAPNCQRSRRNKGNRRLSCSYASLGRMQATP 108
>AE014297-4235|AAF56793.2| 5106|Drosophila melanogaster CG1842-PA
protein.
Length = 5106
Score = 30.7 bits (66), Expect = 2.6
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = -2
Query: 638 LLLWCMKSPLILQTVRDPGRF*QIQNLACE*CSCIQSL-EYLNVQIQIH-KLHLVIRDFL 465
+++ C K+PL++ PGR +IQ L +C +SL EYL+ + +I + + + D L
Sbjct: 2110 IMVDCAKNPLVVPFCTVPGRLVEIQGLGIGLENCQKSLNEYLDSKRRIFPRFYFISTDEL 2169
Query: 464 L 462
L
Sbjct: 2170 L 2170
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,986,151
Number of Sequences: 53049
Number of extensions: 693921
Number of successful extensions: 1522
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1514
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -