Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0372
         (541 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   9.2  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    21   9.2  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   9.2  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   9.2  

>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 1   FICLVRSADATSCSRFGFW 57
           F CLV + +   C R GF+
Sbjct: 66  FGCLVGTPETLRCQREGFF 84


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = +2

Query: 356 ASGSGYYFGDANSAGSGLTNNYYPY 430
           A G+        SAG   T  YYPY
Sbjct: 45  AGGTAADMSAWTSAGLQPTTGYYPY 69


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 11/35 (31%), Positives = 14/35 (40%)
 Frame = +2

Query: 365 SGYYFGDANSAGSGLTNNYYPYYSTSGAGFNGLYY 469
           S Y F D     +   N  Y  Y+    GF+  YY
Sbjct: 202 SSYQFNDPQFNFNYQYNQAYSNYNNYQEGFSCQYY 236


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 11/35 (31%), Positives = 14/35 (40%)
 Frame = +2

Query: 365 SGYYFGDANSAGSGLTNNYYPYYSTSGAGFNGLYY 469
           S Y F D     +   N  Y  Y+    GF+  YY
Sbjct: 222 SSYQFNDPQFNFNYQYNQAYSNYNNYQEGFSCQYY 256


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,175
Number of Sequences: 336
Number of extensions: 1787
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)