Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0372
         (541 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    24   1.1  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    23   2.0  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   6.1  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   6.1  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   8.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   8.1  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 81  ADVSHLGXXYKAPQTSYGY 137
           AD   L   YK+PQ  +GY
Sbjct: 66  ADALWLSPIYKSPQVDFGY 84


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +3

Query: 324 PLLVRLATETMHLDLDITLVTLIRLAVD*PITTTHIILP 440
           PLL +    TM LD     VT++ L V      TH++ P
Sbjct: 301 PLLGKFVLFTMILDTFSICVTVVVLNVHFRSPQTHVMAP 339


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 144 YQLGESSSHQQSSKLGDIY 200
           YQLG+    +    LGDIY
Sbjct: 50  YQLGQFLRERYGDFLGDIY 68


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 144 YQLGESSSHQQSSKLGDIY 200
           YQLG+    +    LGDIY
Sbjct: 65  YQLGQFLRERYGDFLGDIY 83


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 406 INQ*LLPILFYLWRWFQ 456
           I+  +LP+   LWRW +
Sbjct: 47  ISNDILPVCNGLWRWIR 63


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 406 INQ*LLPILFYLWRWFQ 456
           I+  +LP+   LWRW +
Sbjct: 85  ISNDILPVCNGLWRWIR 101


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,866
Number of Sequences: 438
Number of extensions: 2148
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)