Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0371
         (681 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    29   0.027
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.19 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    26   0.33 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    25   0.76 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   4.0  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   5.3  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   5.3  
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    22   5.3  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   7.1  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   7.1  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   7.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.3  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 29.5 bits (63), Expect = 0.027
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -2

Query: 647 HYNRCIF*YDCQLWPQIELWLYLVLLRFYSYCQLS 543
           +YN   F  + QLW +I+ W YL+LL  ++    S
Sbjct: 26  YYNFEKFSLEHQLWQKIQAWTYLILLTTWTVISAS 60


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
 Frame = -1

Query: 657 WXFPL*QMHILV*LSVMAANRAVALFGSSKILFILSIVCLLIIALLFCSSIWLFLIHLNC 478
           + F L  +H+L+ + +        LF  + I+F + ++ LL I   +C+ I L  I+  C
Sbjct: 243 YAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCALIILLCIYYFC 302

Query: 477 H-FHENPS--VAVVSVYGI-SCLCAHVVRYTSESICSLFPPFYKSS 352
             F   P+      S+Y + S    +VVR   E    + P  + S+
Sbjct: 303 RAFIIFPTHFYCAFSLYPLKSTFYLNVVRPFPERSMGITPMIWNST 348


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 10/41 (24%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -1

Query: 585 LFGSSKIL-FILSIVCLLIIALLFCSSIWLFLIHLNCHFHE 466
           +F  +K+L F ++ V + +  L++ +++W+  +   C F E
Sbjct: 708 VFSETKLLLFKITSVMIAVSGLVYIATVWICTLMNRCKFSE 748



 Score = 21.8 bits (44), Expect = 5.3
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = -1

Query: 495 LIHLNCHFHENPSVAVVSVYGISCLCAHVVRYTSESICSLF 373
           LIH +    EN +V     +    LC  + RY + ++  LF
Sbjct: 110 LIHFDTKCQENSTVIDYKRHKKRLLCYLLARYVALALVILF 150


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 157  TIGPNSPAKKELIYEEKQIPAKI 225
            TIG   P+KK  +     +PAKI
Sbjct: 1287 TIGEGQPSKKVTVSPSASVPAKI 1309


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -1

Query: 567 ILFILSIVCLLIIALLFC 514
           I+F+  I+ L+I+ +L+C
Sbjct: 241 IIFLFFIIPLIILLILYC 258


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 14/63 (22%), Positives = 32/63 (50%)
 Frame = +3

Query: 408 QRERRDMKYHKRKLQLQKDFHENDNLNVLKIAKLMNRTTVQ*STGRQLTI*IES*KNQIK 587
           +R  R      + L+L+K+FH N  L   +  ++ +   +   T RQ+ I  ++ + ++K
Sbjct: 223 RRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCL---TERQIKIWFQNRRMKLK 279

Query: 588 PQL 596
            ++
Sbjct: 280 KEI 282


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = -1

Query: 495 LIHLNCHFHENPSVAVVSVYGISCLCAHVVRYTSESICSLF 373
           LIH +    EN +V     +    LC  + RY + ++  LF
Sbjct: 128 LIHFDTKCQENSTVIDYKRHKKRLLCYLLARYVALALVILF 168


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
           protein.
          Length = 96

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 14/63 (22%), Positives = 32/63 (50%)
 Frame = +3

Query: 408 QRERRDMKYHKRKLQLQKDFHENDNLNVLKIAKLMNRTTVQ*STGRQLTI*IES*KNQIK 587
           +R  R      + L+L+K+FH N  L   +  ++ +   +   T RQ+ I  ++ + ++K
Sbjct: 5   RRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCL---TERQIKIWFQNRRMKLK 61

Query: 588 PQL 596
            ++
Sbjct: 62  KEI 64


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 381 NKCFQKYSEQRERRDMKYHKRKLQLQKDFHEN 476
           N  F    E + +R      + L+L+K+FH N
Sbjct: 224 NGTFAPGMEPKRQRTAYTRHQILELEKEFHYN 255


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 381 NKCFQKYSEQRERRDMKYHKRKLQLQKDFHEN 476
           N  F    E + +R      + L+L+K+FH N
Sbjct: 224 NGTFAPGMEPKRQRTAYTRHQILELEKEFHYN 255


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 381 NKCFQKYSEQRERRDMKYHKRKLQLQKDFHEN 476
           N  F    E + +R      + L+L+K+FH N
Sbjct: 224 NGTFAPGMEPKRQRTAYTRHQILELEKEFHYN 255


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 546 VCLLIIALLFCSSIWLFLIH 487
           V LL +  +FC  I+LF ++
Sbjct: 138 VSLLQLVFVFCYFIYLFTVY 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,592
Number of Sequences: 336
Number of extensions: 3287
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)