Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0370
(665 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111; Eukar... 99 8e-20
UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S riboso... 91 2e-17
UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27; Viri... 90 5e-17
UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2; Basidio... 83 8e-15
UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=... 74 4e-12
UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=... 74 4e-12
UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6; Trichom... 74 4e-12
UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26; Fungi/... 73 8e-12
UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=... 68 2e-10
UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5; Ascomyc... 64 2e-09
UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9; Oligohy... 63 5e-09
UniRef50_O14377 Cluster: Putative uncharacterized protein; n=1; ... 61 2e-08
UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillar... 58 1e-07
UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n... 56 6e-07
UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoe... 55 1e-06
UniRef50_UPI00005A0D5A Cluster: PREDICTED: similar to ribosomal ... 54 3e-06
UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n... 52 1e-05
UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1; Encepha... 44 0.004
UniRef50_Q018B3 Cluster: Chromosome 05 contig 1, DNA sequence; n... 39 0.094
UniRef50_A2YRI3 Cluster: 60S ribosomal protein L13; n=2; Oryza s... 36 0.88
UniRef50_Q01GC3 Cluster: Predicted E3 ubiquitin ligase; n=1; Ost... 35 1.5
UniRef50_Q7KTI0 Cluster: CG17608-PA, isoform A; n=3; Sophophora|... 34 2.7
UniRef50_A4RXC6 Cluster: Predicted protein; n=1; Ostreococcus lu... 33 6.2
UniRef50_Q8I4B0 Cluster: Putative uncharacterized protein; n=7; ... 33 6.2
UniRef50_Q17A66 Cluster: Mixed-lineage leukemia protein, mll; n=... 33 6.2
UniRef50_Q4Y1F8 Cluster: Nucleolar GTP-binding protein 1, putati... 33 8.2
UniRef50_Q23RD5 Cluster: Putative uncharacterized protein; n=1; ... 33 8.2
UniRef50_Q752I3 Cluster: AFR592Wp; n=2; Saccharomycetaceae|Rep: ... 33 8.2
UniRef50_Q4WCW8 Cluster: C2H2 finger domain protein, putative; n... 33 8.2
>UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111;
Eukaryota|Rep: 60S ribosomal protein L13 - Homo sapiens
(Human)
Length = 211
Score = 99.1 bits (236), Expect = 8e-20
Identities = 45/77 (58%), Positives = 51/77 (66%)
Frame = +2
Query: 26 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIKKXXXXXXXXXXXXXXXIVRCPTVR 205
N M+ HFHKDWQR V TWFNQPAR+ RR++ R K IVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 206 YHTKVRAGRGFTLREIR 256
YHTKVRAGRGF+L E+R
Sbjct: 66 YHTKVRAGRGFSLEELR 82
Score = 97.5 bits (232), Expect = 3e-19
Identities = 50/77 (64%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = +3
Query: 279 ARTIGSAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQL 455
ARTIG +VDPRRRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL
Sbjct: 91 ARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQL 150
Query: 456 RGPLMPVQQPAPKSVAR 506
GP+MPV+ K AR
Sbjct: 151 TGPVMPVRNVYKKEKAR 167
Score = 52.4 bits (120), Expect = 9e-06
Identities = 28/45 (62%), Positives = 34/45 (75%)
Frame = +2
Query: 503 KTITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 637
+ ITE+EKNFKA+ LR AR+ A+L GIRAKR K+AAE DV K
Sbjct: 167 RVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAE--QDVEK 209
>UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S ribosomal
protein L13; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to 60S ribosomal protein L13 - Tribolium
castaneum
Length = 198
Score = 91.1 bits (216), Expect = 2e-17
Identities = 42/81 (51%), Positives = 52/81 (64%)
Frame = +2
Query: 14 MGKGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIKKXXXXXXXXXXXXXXXIVRC 193
M + NNMIPNGHFHK WQ+ VK WFNQP ++ RRK R KK +V C
Sbjct: 1 MVRHNNMIPNGHFHKKWQQKVKLWFNQPMKKLRRKALRAKK-SRQLAPKPTELLRPLVHC 59
Query: 194 PTVRYHTKVRAGRGFTLREIR 256
P+ RY +KVRAGRGFT +E++
Sbjct: 60 PSERYKSKVRAGRGFTFQELK 80
Score = 57.6 bits (133), Expect = 3e-07
Identities = 27/47 (57%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Frame = +3
Query: 276 FARTIGSAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGK-KVLK 413
+AR+ G AVDPRRRN+ ES+ N+QR+ EY++RLI P K KVLK
Sbjct: 88 YARSFGVAVDPRRRNRCTESIAANIQRLIEYKSRLIFLPDSKNKVLK 134
>UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27;
Viridiplantae|Rep: 60S ribosomal protein L13-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 206
Score = 89.8 bits (213), Expect = 5e-17
Identities = 61/199 (30%), Positives = 91/199 (45%), Gaps = 2/199 (1%)
Frame = +2
Query: 20 KGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIKKXXXXXXXXXXXXXXXIVRCPT 199
K NN+IP+ HF K WQ +VKTWFNQPAR+ RR+ R KK +V T
Sbjct: 2 KHNNVIPSSHFRKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTSGPLRPVVHGQT 61
Query: 200 VRYHTKVRAGRGFTLREIR-PQIEPSICPNDWKCCRSP*TQQVC*IIANQCSKNKGIQSA 376
++Y+ KVRAG+GFTL E++ I + P + + + + K ++
Sbjct: 62 LKYNMKVRAGKGFTLEELKVAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAK 121
Query: 377 SYTVPERQKGAEG*GQ*RRT*AGYT-ATWSINASSTACS*ISCKTITEDEKNFKAYQYLR 553
P R + + A T ++ + + +T D K FKAY +R
Sbjct: 122 LVVFPRRSRQVKAGDSTPEELANATQVQGDYMPIASVKAAMELVKLTADLKAFKAYDKIR 181
Query: 554 GARSIAKLVGIRAKRLKDA 610
R+ A+ G RAKR +A
Sbjct: 182 LERTNARHAGARAKRAAEA 200
Score = 70.5 bits (165), Expect = 3e-11
Identities = 33/67 (49%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = +3
Query: 279 ARTIGSAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQL 455
A TIG +VD RR+N+S+E LQ NVQR+K Y+A+L++FP + ++V G++ EE ATQ+
Sbjct: 89 APTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRSRQVKAGDSTPEELANATQV 148
Query: 456 RGPLMPV 476
+G MP+
Sbjct: 149 QGDYMPI 155
>UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2;
Basidiomycota|Rep: 60S ribosomal protein L13 - Ustilago
maydis (Smut fungus)
Length = 209
Score = 82.6 bits (195), Expect = 8e-15
Identities = 37/79 (46%), Positives = 49/79 (62%)
Frame = +2
Query: 20 KGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIKKXXXXXXXXXXXXXXXIVRCPT 199
K NN++ N HF KDWQR VK WF+QP + RR+ R K VRCPT
Sbjct: 4 KHNNILHNNHFRKDWQRRVKVWFDQPGAKKRRRTAREAK-AAKLGLRPVQLLRPAVRCPT 62
Query: 200 VRYHTKVRAGRGFTLREIR 256
+RY+TK+R+GRGFT+ E++
Sbjct: 63 LRYNTKIRSGRGFTIEEVK 81
Score = 58.4 bits (135), Expect = 1e-07
Identities = 33/82 (40%), Positives = 49/82 (59%)
Frame = +3
Query: 264 LNPVFARTIGSAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEERKL 443
L +AR++G VD RRRNKS ESL++NV+RIK Y+ARL++ PK K K + +
Sbjct: 85 LGKKYARSVGIPVDHRRRNKSEESLKLNVERIKAYQARLVVIPKLTKKNKDKKVDLSNVE 144
Query: 444 ATQLRGPLMPVQQPAPKSVARP 509
A + ++P+ PA +P
Sbjct: 145 AVRQVQSVLPL--PAGTEAEKP 164
>UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=7;
Trypanosomatidae|Rep: 60S ribosomal protein L13,
putative - Trypanosoma brucei
Length = 229
Score = 73.7 bits (173), Expect = 4e-12
Identities = 38/66 (57%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Frame = +3
Query: 264 LNPVFARTIGSAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERK 440
+ P +ARTIG VD RR+NKS E + INVQR+K Y ++L+LFP KK KG+A EEE K
Sbjct: 101 VKPRYARTIGIRVDRRRKNKSEEGMNINVQRLKTYMSKLVLFPLNRKKPQKGDATEEEVK 160
Query: 441 LATQLR 458
ATQ R
Sbjct: 161 AATQDR 166
Score = 63.3 bits (147), Expect = 5e-09
Identities = 36/87 (41%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Frame = +2
Query: 14 MGKGNNMIPNGHFHKDWQRF------VKTWFNQPARRYRRKQNRIKKXXXXXXXXXXXXX 175
M KGNN IP+ H K W VK +FNQPA++ RR++ R+ K
Sbjct: 12 MPKGNNAIPHVHQRKHWNPCSSQKGNVKVFFNQPAQKQRRRRLRLLKAKKIFPRPLKALR 71
Query: 176 XXIVRCPTVRYHTKVRAGRGFTLREIR 256
V CPTVRY+ K R GRGF+L E++
Sbjct: 72 PQ-VNCPTVRYNMKRRLGRGFSLEELK 97
>UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L13, putative
- Cryptosporidium parvum Iowa II
Length = 207
Score = 73.7 bits (173), Expect = 4e-12
Identities = 34/76 (44%), Positives = 47/76 (61%)
Frame = +2
Query: 26 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIKKXXXXXXXXXXXXXXXIVRCPTVR 205
NN+IPN H+HK+++R++KTW+NQP R+ R+ R +K IV PT R
Sbjct: 4 NNVIPNVHYHKNYKRWIKTWYNQPGRKQSRRIAR-QKAVAEAGFRPVGMLRPIVHPPTQR 62
Query: 206 YHTKVRAGRGFTLREI 253
Y+ K R GRGFTL E+
Sbjct: 63 YNMKTRLGRGFTLEEL 78
Score = 47.6 bits (108), Expect = 3e-04
Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Frame = +3
Query: 264 LNPVFARTIGSAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEA 422
+N A +IG AVD RR + S E+ QINV R+K+Y ++L P KGKK KG A
Sbjct: 83 INKKAAMSIGIAVDHRRTDLSEETFQINVDRLKKYINGIVLQPRKGKKTKKGFA 136
>UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L13
- Trichomonas vaginalis G3
Length = 210
Score = 73.7 bits (173), Expect = 4e-12
Identities = 36/82 (43%), Positives = 45/82 (54%)
Frame = +2
Query: 8 VKMGKGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIKKXXXXXXXXXXXXXXXIV 187
++M NN IPN H K W VKT+F+ PAR RR+ R + IV
Sbjct: 20 LEMVAKNNQIPNDHLRKYWYHRVKTYFDDPARAQRRRNARNLRAKKIAPRPAEGPLRPIV 79
Query: 188 RCPTVRYHTKVRAGRGFTLREI 253
RCPTVRY+ K R GRGFT +E+
Sbjct: 80 RCPTVRYNMKTRLGRGFTPKEL 101
Score = 39.9 bits (89), Expect = 0.054
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +3
Query: 267 NPVFARTIGSAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKV 407
+P AR G AVD RR + ++ NV+R++ Y+ARLI KG+ V
Sbjct: 107 DPALARFQGIAVDARRAHSKDAMVKQNVERLQAYKARLIKVKKGETV 153
>UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L13 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 243
Score = 72.5 bits (170), Expect = 8e-12
Identities = 32/69 (46%), Positives = 45/69 (65%)
Frame = +2
Query: 50 FHKDWQRFVKTWFNQPARRYRRKQNRIKKXXXXXXXXXXXXXXXIVRCPTVRYHTKVRAG 229
FHKDWQR V+ F+QP R++RR++ R+ K +VRCPTV+Y+ +VR G
Sbjct: 31 FHKDWQRRVRVHFDQPGRKHRRREARLAK-AAAVAPRPVDKLRPVVRCPTVKYNRRVRVG 89
Query: 230 RGFTLREIR 256
RGFTL E++
Sbjct: 90 RGFTLAELK 98
Score = 54.0 bits (124), Expect = 3e-06
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = +3
Query: 279 ARTIGSAVDPRRRNKSVESLQINVQRIKEYRARLILFPK 395
ART+G AVD RR N S ESL NV R+K+Y+ARLILFP+
Sbjct: 107 ARTVGIAVDHRRVNYSKESLVANVARLKDYKARLILFPR 145
>UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=5;
Plasmodium|Rep: 60S ribosomal protein L13, putative -
Plasmodium chabaudi
Length = 215
Score = 67.7 bits (158), Expect = 2e-10
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +2
Query: 26 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIKKXXXXXXXXXXXXXXXIVRCPTVR 205
NN++PN H HK WQR+V+ FN+ +R +R+ R +K +V CPT R
Sbjct: 5 NNVLPNVHLHKWWQRYVRVDFNKNIKRKQRRLLR-EKRRKQNGGTPIEKLHPVVHCPTQR 63
Query: 206 YHTKVRAGRGFTLREIRP-QIEPS 274
Y+ K R G+GFTL EI+ ++ PS
Sbjct: 64 YNYKTRLGKGFTLEEIKAVKLTPS 87
Score = 44.0 bits (99), Expect = 0.003
Identities = 20/47 (42%), Positives = 31/47 (65%)
Frame = +3
Query: 261 RLNPVFARTIGSAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGK 401
+L P AR+IG VD RR+N+ ESL+ N +R+++Y L++ P K
Sbjct: 83 KLTPSAARSIGIIVDKRRKNRCEESLKENAERLQKYLNSLVMIPLKK 129
>UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5;
Ascomycota|Rep: 60S ribosomal protein L13 - Candida
albicans (Yeast)
Length = 202
Score = 64.5 bits (150), Expect = 2e-09
Identities = 30/72 (41%), Positives = 43/72 (59%)
Frame = +2
Query: 41 NGHFHKDWQRFVKTWFNQPARRYRRKQNRIKKXXXXXXXXXXXXXXXIVRCPTVRYHTKV 220
N HF K WQ V+ F+Q ++ R+Q+R++K +VR PTV+Y+ KV
Sbjct: 11 NNHFRKHWQERVRVHFDQAGKKASRRQSRLRKAAKIAPRPIDALRP-VVRAPTVKYNRKV 69
Query: 221 RAGRGFTLREIR 256
RAGRGFTL E++
Sbjct: 70 RAGRGFTLAELK 81
Score = 62.5 bits (145), Expect = 9e-09
Identities = 34/79 (43%), Positives = 50/79 (63%)
Frame = +3
Query: 270 PVFARTIGSAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEERKLAT 449
P +ARTIG +VD RR+NKS E+ NV R++EY+++L++F K K + + E+ AT
Sbjct: 87 PKYARTIGISVDHRRQNKSQETFDANVARLQEYKSKLVIFDKKTKASEVASFEQVDVSAT 146
Query: 450 QLRGPLMPVQQPAPKSVAR 506
PV+QPAP+S R
Sbjct: 147 ------FPVEQPAPESGLR 159
>UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9;
Oligohymenophorea|Rep: 60S ribosomal protein L13 -
Paramecium tetraurelia
Length = 208
Score = 63.3 bits (147), Expect = 5e-09
Identities = 30/79 (37%), Positives = 45/79 (56%)
Frame = +2
Query: 20 KGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIKKXXXXXXXXXXXXXXXIVRCPT 199
K N +PN H K W RFVKT++NQPA + RR+Q R + +VR T
Sbjct: 2 KHNQQLPNAHMRKHWTRFVKTFYNQPAAK-RRRQLRRRAQALSASPRPVELLRPVVRGQT 60
Query: 200 VRYHTKVRAGRGFTLREIR 256
++Y++ + GRGF+L E++
Sbjct: 61 IKYNSVQKLGRGFSLIELK 79
Score = 56.4 bits (130), Expect = 6e-07
Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Frame = +3
Query: 264 LNPVFARTIGSAVDPRRRNKSVESLQINVQRIKEYRARLILFPK--GKK---VLKGEANE 428
LN FART+G +VD RRRN + E L NV+R+K Y ++L+L+P+ GK V+K NE
Sbjct: 83 LNAAFARTVGISVDHRRRNLNQEELNNNVKRLKAYLSKLVLYPRVAGKPKNGVVKDSTNE 142
Query: 429 EERKLATQLRGPLMPVQQPAPK 494
Q P + Q PK
Sbjct: 143 VVAHPVAQNTNPEVLTFQRTPK 164
>UniRef50_O14377 Cluster: Putative uncharacterized protein; n=1;
Schizosaccharomyces pombe|Rep: Putative uncharacterized
protein - Schizosaccharomyces pombe (Fission yeast)
Length = 70
Score = 61.3 bits (142), Expect = 2e-08
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = +2
Query: 35 IPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIK 133
+PN HFHKDWQR+VKTWFNQP R+ RR+ + K
Sbjct: 12 LPNAHFHKDWQRYVKTWFNQPGRKLRRQARQTK 44
>UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillardia
theta|Rep: 60S ribosomal protein L13 - Guillardia theta
(Cryptomonas phi)
Length = 127
Score = 58.4 bits (135), Expect = 1e-07
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +2
Query: 44 GHFHKDWQRFVKTWFNQPARRY-RRKQNRIKKXXXXXXXXXXXXXXXIVRCPTVRYHTKV 220
GHF K W+ V T FNQP + RRK + KK +V+CPT ++TK+
Sbjct: 10 GHFRKKWKNLVITNFNQPILKIKRRKIRKNKKKNFLKKAIFYKKLKPLVKCPTRMHNTKI 69
Query: 221 RAGRGFTLREIR 256
+ GRGF+++EI+
Sbjct: 70 KLGRGFSIQEIK 81
>UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n=4;
Piroplasmida|Rep: 60S ribosomal protein L13e, putative -
Theileria parva
Length = 205
Score = 56.4 bits (130), Expect = 6e-07
Identities = 26/48 (54%), Positives = 34/48 (70%)
Frame = +3
Query: 279 ARTIGSAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEA 422
AR++G AVD RR NK ESL +NV R+K Y ++L+LFP+ K KG A
Sbjct: 89 ARSVGVAVDHRRTNKCAESLNLNVNRLKTYLSKLVLFPRKKHAKKGFA 136
Score = 50.0 bits (114), Expect = 5e-05
Identities = 30/81 (37%), Positives = 43/81 (53%)
Frame = +2
Query: 14 MGKGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIKKXXXXXXXXXXXXXXXIVRC 193
M K NNM+ + H K RFVK NQ ++ RR+ R +K +V
Sbjct: 1 MVKHNNMLSDVHRVKCSHRFVKPVLNQAGKKKRRRLARQRKAAASGLTPTGYLRP-LVHM 59
Query: 194 PTVRYHTKVRAGRGFTLREIR 256
P+ RY+ K+R GRGFTL+E++
Sbjct: 60 PSRRYNYKLRFGRGFTLQELK 80
>UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoeba
histolytica|Rep: 60S ribosomal protein L13 - Entamoeba
histolytica
Length = 138
Score = 55.2 bits (127), Expect = 1e-06
Identities = 27/69 (39%), Positives = 37/69 (53%)
Frame = +2
Query: 50 FHKDWQRFVKTWFNQPARRYRRKQNRIKKXXXXXXXXXXXXXXXIVRCPTVRYHTKVRAG 229
F KDW+ V TW QP R+ RR Q R++K V C R++ K+R G
Sbjct: 12 FGKDWRSKVHTWVQQPFRKIRRHQTRVEKAKSVFPATIKSLKPS-VHCMNQRFNYKLRLG 70
Query: 230 RGFTLREIR 256
RGF+L+E+R
Sbjct: 71 RGFSLKELR 79
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/50 (46%), Positives = 30/50 (60%)
Frame = +3
Query: 261 RLNPVFARTIGSAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVL 410
+++ ARTIG AVDPRR+ S E L N QR+ EY RL L K++
Sbjct: 82 KIDKNLARTIGIAVDPRRKESSKECLTRNAQRLTEYMNRLCLKSVSVKIV 131
>UniRef50_UPI00005A0D5A Cluster: PREDICTED: similar to ribosomal
protein L13 isoform 4; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L13 isoform 4 -
Canis familiaris
Length = 102
Score = 54.0 bits (124), Expect = 3e-06
Identities = 22/30 (73%), Positives = 23/30 (76%)
Frame = +2
Query: 26 NNMIPNGHFHKDWQRFVKTWFNQPARRYRR 115
N MI HFHKDWQR V TWFNQPAR+ RR
Sbjct: 6 NGMILKPHFHKDWQRRVATWFNQPARKIRR 35
>UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC2213 UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 52.0 bits (119), Expect = 1e-05
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = +2
Query: 182 IVRCPTVRYHTKVRAGRGFTLREIR 256
IVRCPTVRYHTKVR GRGF+L EIR
Sbjct: 16 IVRCPTVRYHTKVRGGRGFSLEEIR 40
Score = 35.5 bits (78), Expect = 1.2
Identities = 17/54 (31%), Positives = 32/54 (59%)
Frame = +3
Query: 279 ARTIGSAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEERK 440
ARTI +VDP+++ K E + +R+ E + I++PK +K + + +E +K
Sbjct: 49 ARTIDISVDPKKKKKKKERKKEKNERVTETNQKDIIYPKREKEREKKGMKEGKK 102
>UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L13
- Encephalitozoon cuniculi
Length = 163
Score = 43.6 bits (98), Expect = 0.004
Identities = 24/77 (31%), Positives = 34/77 (44%)
Frame = +2
Query: 20 KGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIKKXXXXXXXXXXXXXXXIVRCPT 199
KGN+ +PN HF K + + P + R + + IVRCPT
Sbjct: 2 KGNHALPNNHFRKTSLKI--RIHHDPETKARVMAEKKLRKAKALFPMPLKKLRPIVRCPT 59
Query: 200 VRYHTKVRAGRGFTLRE 250
++Y+ R GRGFT E
Sbjct: 60 IKYNRNERLGRGFTAAE 76
Score = 39.5 bits (88), Expect = 0.071
Identities = 26/71 (36%), Positives = 38/71 (53%)
Frame = +3
Query: 279 ARTIGSAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEERKLATQLR 458
AR +G AVD RRR+ + E+ NV+RIK Y ++ ++ K EA E K T+
Sbjct: 87 ARRLGIAVDLRRRDTNQEAFDKNVERIKTYLGKITIYESVK-----EARESGAKPYTK-- 139
Query: 459 GPLMPVQQPAP 491
+MP +P P
Sbjct: 140 -EIMPFVKPKP 149
>UniRef50_Q018B3 Cluster: Chromosome 05 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 05 contig 1, DNA
sequence - Ostreococcus tauri
Length = 527
Score = 39.1 bits (87), Expect = 0.094
Identities = 19/33 (57%), Positives = 20/33 (60%)
Frame = -3
Query: 249 SRRVNPLPARTLVWYRTVGHRTIGRNGPAAGRG 151
S V P P R L YR VG TIGR+ PA GRG
Sbjct: 411 SSSVKPRPRRVLKLYRCVGGCTIGRSAPATGRG 443
>UniRef50_A2YRI3 Cluster: 60S ribosomal protein L13; n=2; Oryza
sativa|Rep: 60S ribosomal protein L13 - Oryza sativa
subsp. indica (Rice)
Length = 138
Score = 35.9 bits (79), Expect = 0.88
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +2
Query: 182 IVRCPTVRYHTKVRAGRGFTLREIR 256
IV+C T++Y+ K RAGRGF L E++
Sbjct: 48 IVQCQTLKYNMKSRAGRGFILEELK 72
>UniRef50_Q01GC3 Cluster: Predicted E3 ubiquitin ligase; n=1;
Ostreococcus tauri|Rep: Predicted E3 ubiquitin ligase -
Ostreococcus tauri
Length = 355
Score = 35.1 bits (77), Expect = 1.5
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = +3
Query: 210 ILKYAPVEDSLFVKLGRRLNPVFARTIGSAVDPRRRNKSVESLQINVQRIKEYRARLILF 389
I++Y V D + R +N AR +G+ R R + +N R E R +
Sbjct: 253 IIEYGRVPD--LAAIAREVNREEARKVGAGAKARIRAITATPSSLNSSRRFEIEVRRVRP 310
Query: 390 PKGKKVLKGEANEEERKLATQL-RGPLMPVQQPAPKSV 500
P G+ + +EEE + L ++P+ Q AP+ V
Sbjct: 311 PAGRTMDNHHDDEEEAEEERSLSEDEILPLSQAAPRYV 348
>UniRef50_Q7KTI0 Cluster: CG17608-PA, isoform A; n=3;
Sophophora|Rep: CG17608-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 271
Score = 34.3 bits (75), Expect = 2.7
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +3
Query: 300 VDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEA---NEEERKLATQLRGPLM 470
+D R+ S+ SLQ + I+E +L+LFP+G + K + +A Q + P+
Sbjct: 141 IDRSRKTDSINSLQKEAKAIQERNCKLLLFPEGTRNSKDSLLPFKKGSFHIALQGKSPVQ 200
Query: 471 PV 476
PV
Sbjct: 201 PV 202
>UniRef50_A4RXC6 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 810
Score = 33.1 bits (72), Expect = 6.2
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = +3
Query: 381 ILFPKGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPSLKMKRTSKLINT*EEL 560
+L P+ + + ANE R+ ++ PV+ +P +VA PSL+ + + + +
Sbjct: 194 LLGPRASRASRASANEAARRALRRIAQVTAPVEV-SPAAVAEPSLRESSPAPALAMNDPV 252
Query: 561 APLPNS 578
PLP S
Sbjct: 253 TPLPPS 258
>UniRef50_Q8I4B0 Cluster: Putative uncharacterized protein; n=7;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 536
Score = 33.1 bits (72), Expect = 6.2
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -3
Query: 342 FAMIQQTCCVYGDLQHFQSFGQILGSICGLISRRVNPLPARTLV 211
F ++ T YGDL FG+++G +C +I LP +V
Sbjct: 465 FVLVTMTTVGYGDLVPLSPFGKVVGGMCAMIGVLTLALPVPIIV 508
>UniRef50_Q17A66 Cluster: Mixed-lineage leukemia protein, mll; n=2;
Culicidae|Rep: Mixed-lineage leukemia protein, mll -
Aedes aegypti (Yellowfever mosquito)
Length = 2874
Score = 33.1 bits (72), Expect = 6.2
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +3
Query: 381 ILFPKGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARP-SLKMKRTSKLI 542
I FP G +V+K E+NEE++ + + P++P+ P P + + SL R+ LI
Sbjct: 2016 IHFP-GLRVIKEESNEEDQTMIFKRMSPIIPIVAPIPIRLKKGISLSSDRSLSLI 2069
>UniRef50_Q4Y1F8 Cluster: Nucleolar GTP-binding protein 1, putative;
n=6; Plasmodium|Rep: Nucleolar GTP-binding protein 1,
putative - Plasmodium chabaudi
Length = 682
Score = 32.7 bits (71), Expect = 8.2
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 303 DPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEAN 425
DP R+ + +S +QR K Y+ ++ + + KK KGEA+
Sbjct: 618 DPTRKMRIYQSTSTEIQRKKAYKLNIVAYRQIKKGTKGEAD 658
>UniRef50_Q23RD5 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 497
Score = 32.7 bits (71), Expect = 8.2
Identities = 12/26 (46%), Positives = 23/26 (88%)
Frame = +2
Query: 59 DWQRFVKTWFNQPARRYRRKQNRIKK 136
++ +FV+++FN+P + YR+KQN++KK
Sbjct: 216 EYSKFVQSYFNKP-KLYRQKQNQLKK 240
>UniRef50_Q752I3 Cluster: AFR592Wp; n=2; Saccharomycetaceae|Rep:
AFR592Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 319
Score = 32.7 bits (71), Expect = 8.2
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Frame = +3
Query: 300 VDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEERK-----LATQLRGP 464
+D R+KS++SL +++R+K R +FP+G + E K LA Q + P
Sbjct: 164 LDRSNRSKSLKSLNASLERLKRNRQAAWIFPEGTRSYTTEMQLLPFKKGAFHLAQQAQIP 223
Query: 465 LMPVQQPAPKSVARPSL 515
++PV +V P L
Sbjct: 224 VIPVVMCNTSTVFNPRL 240
>UniRef50_Q4WCW8 Cluster: C2H2 finger domain protein, putative; n=7;
Trichocomaceae|Rep: C2H2 finger domain protein, putative
- Aspergillus fumigatus (Sartorya fumigata)
Length = 336
Score = 32.7 bits (71), Expect = 8.2
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -2
Query: 334 DSTDLLRLRGSTALPIVRANTGFNLRPNFTK--SESSTGAYFSMVPNSWASHYRT*RP 167
D L+ S +P R+ + N + K SE STG+YFS VP S+ RT +P
Sbjct: 2 DVASLISPSESDTVPTFRSRSIQNSSASHYKRLSEQSTGSYFSAVPTHTTSYSRTPQP 59
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 640,428,665
Number of Sequences: 1657284
Number of extensions: 12460096
Number of successful extensions: 34126
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 33182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34098
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -