Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0369
         (716 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0371 + 22774245-22774413,22774504-22774670,22775538-227756...    31   1.2  

>11_06_0371 +
           22774245-22774413,22774504-22774670,22775538-22775631,
           22775723-22775871,22775950-22776042,22776167-22776235,
           22776236-22776415,22776465-22776518,22776739-22776905,
           22777180-22777314,22777386-22777479,22777567-22777848
          Length = 550

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = +2

Query: 287 FFFSLSKFTDTG--KFQHTLPKFFF*FNEIILNRIPIVVSSVLDVSKYGL*DLFECSVTR 460
           +FFSL  FT      FQ +  KF++  NE +L  + +V  ++ +VSK G   L    + R
Sbjct: 231 YFFSLVHFTKVVYCHFQVSGSKFYYLKNEAVLLEMALVNWAITEVSKKGFTPLITPEIVR 290


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,584,434
Number of Sequences: 37544
Number of extensions: 309518
Number of successful extensions: 450
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 450
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)