Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0367
         (816 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    27   0.24 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    26   0.31 
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   3.8  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    23   3.8  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   5.1  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   8.9  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   8.9  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 26.6 bits (56), Expect = 0.24
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +2

Query: 473 NNILLVAGSADFKYESSLPISRISKISLDRMCGGSKLP 586
           ++++ +     F +  S P+S+I  +S D+ C G   P
Sbjct: 522 DHVISLIDEISFTFPPSPPLSQIHDLSPDQFCNGDNRP 559


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 26.2 bits (55), Expect = 0.31
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +3

Query: 21  TFGDSCAPITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHD 170
           T  +SC   T    N+D   + F P NN + I  K  ND  ++N   E D
Sbjct: 384 TTANSCRSSTFRN-NRDEYNVCFRPRNNSILI--KNFNDSPESNRSNEID 430


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 204 TNRIVTCSVDRNAYVWTKEMMGNG 275
           T R+ TC    N Y W  E  G+G
Sbjct: 507 TLRLFTCMECPNNYPWILEPTGDG 530


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 668 GNKVAWGRPRQLNST 712
           GN ++W  P  +NST
Sbjct: 174 GNSLSWNNPCSINST 188


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 665 PQRRKRCGPQPPPEGEIGK 609
           P  +K   P PPP+ E+ +
Sbjct: 221 PNSKKSATPSPPPQLEVNE 239


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +3

Query: 204 TNRIVTCSVDRNAYVWTKEMMGNG 275
           T R+ TC    N Y W  +  G+G
Sbjct: 500 TLRLFTCMECPNNYPWILDPTGDG 523


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/39 (25%), Positives = 16/39 (41%)
 Frame = +3

Query: 159 VEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTKEMMGNG 275
           V H  ++   +    T  + TC    N Y W  +  G+G
Sbjct: 494 VPHSCKLTSKEVPGETINLQTCVRCPNNYPWVNDPTGDG 532


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,878
Number of Sequences: 336
Number of extensions: 4902
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)