Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0367
(816 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical ... 159 3e-39
AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical... 37 0.015
U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated p... 36 0.035
AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein. 36 0.035
Z81099-1|CAB03187.1| 600|Caenorhabditis elegans Hypothetical pr... 35 0.061
AC024214-18|AAF36083.1| 211|Caenorhabditis elegans Nuclear pore... 34 0.14
AC024214-17|AAF36082.1| 313|Caenorhabditis elegans Nuclear pore... 34 0.14
U42835-5|AAO61444.1| 517|Caenorhabditis elegans Uncoordinated p... 33 0.24
AL034393-7|CAA22322.2| 337|Caenorhabditis elegans Hypothetical ... 33 0.24
Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical pr... 33 0.32
AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein. 33 0.32
U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical pr... 32 0.56
Z79756-4|CAB02116.2| 478|Caenorhabditis elegans Hypothetical pr... 31 0.99
AL021481-1|CAA16333.1| 363|Caenorhabditis elegans Hypothetical ... 31 0.99
AJ011523-1|CAB38019.1| 760|Caenorhabditis elegans CHE-2 protein... 31 1.3
AC006635-2|AAK68383.1| 760|Caenorhabditis elegans Abnormal chem... 31 1.3
U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical pr... 30 2.3
U23176-7|AAC46713.4| 454|Caenorhabditis elegans Hypothetical pr... 30 2.3
AF399825-1|AAK77200.1| 1262|Caenorhabditis elegans separase prot... 30 2.3
AC024791-1|AAF60651.1| 1262|Caenorhabditis elegans Separase prot... 30 2.3
AC006708-15|AAF60425.1| 504|Caenorhabditis elegans Hypothetical... 30 2.3
Z81531-5|CAB04319.1| 1152|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical pr... 29 4.0
U58762-2|AAK39302.1| 722|Caenorhabditis elegans Hypothetical pr... 29 4.0
U58762-1|AAK39301.1| 732|Caenorhabditis elegans Hypothetical pr... 29 4.0
U21321-1|AAG00051.1| 507|Caenorhabditis elegans Fizzy (cdc20 pr... 29 4.0
AF067942-4|AAG45573.2| 324|Caenorhabditis elegans Hypothetical ... 29 4.0
Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z35663-5|CAA84727.1| 681|Caenorhabditis elegans Hypothetical pr... 28 9.2
>AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical
protein Y79H2A.6 protein.
Length = 368
Score = 159 bits (385), Expect = 3e-39
Identities = 78/143 (54%), Positives = 98/143 (68%), Gaps = 1/143 (0%)
Frame = +2
Query: 260 DDGKWATTLVLLRINRAATCVKWSPMENKFAVGSGARLISICYFEKENNWWVSKHIKKPI 439
D W LVL+R NRAAT VKWSP+ENKFAVGSGA+L+S+CY+EKEN+WWVSK IKKPI
Sbjct: 88 DKNVWKPELVLVRFNRAATYVKWSPLENKFAVGSGAKLVSVCYYEKENDWWVSKQIKKPI 147
Query: 440 RSTVTSIDWHPNNILLVAGSADFKYE-SSLPISRISKISLDRMCGGSKLPLGQLLAEFSQ 616
RSTVT +DWH NN+LL GS DFK S + + + G K+P GQL++E+S
Sbjct: 148 RSTVTCLDWHSNNVLLAVGSCDFKCRVFSAYVKEVDEKPSPNP-WGQKMPFGQLMSEYS- 205
Query: 617 FRLQVAVGVHSVSFSADGNKVAW 685
V VH V+FS G ++A+
Sbjct: 206 ----VGGWVHRVAFSPSGCRLAF 224
Score = 107 bits (257), Expect = 9e-24
Identities = 42/71 (59%), Positives = 55/71 (77%)
Frame = +3
Query: 42 PITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVT 221
PITCHAWNKDR+QIA S ++N++HI++ DW+ + L EHDL V G+DW TNRIV+
Sbjct: 16 PITCHAWNKDRTQIAVSASSNDIHIFEWRNGDWQSIHTLSEHDLPVTGLDWGTKTNRIVS 75
Query: 222 CSVDRNAYVWT 254
CS D+NA+VWT
Sbjct: 76 CSQDKNAFVWT 86
Score = 31.5 bits (68), Expect = 0.75
Identities = 20/64 (31%), Positives = 27/64 (42%)
Frame = +2
Query: 314 TCVKWSPMENKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHPNNILLVA 493
TC W+ + AV + + I I FE N W S H VT +DW +V+
Sbjct: 18 TCHAWNKDRTQIAVSASSNDIHI--FEWRNGDWQSIHTLSEHDLPVTGLDWGTKTNRIVS 75
Query: 494 GSAD 505
S D
Sbjct: 76 CSQD 79
>AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical
protein Y111B2A.17 protein.
Length = 778
Score = 37.1 bits (82), Expect = 0.015
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +3
Query: 132 NDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTKE 260
++W + + ++ H L V I W P+ R++T S DR A ++T++
Sbjct: 596 SNWSKKSEIIGHQLTVTQIAWNPSGTRLLTVSRDRTAKLYTEK 638
>U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated
protein 78, isoform a protein.
Length = 611
Score = 35.9 bits (79), Expect = 0.035
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 39 APITCHAWNKDRSQIAFSPNNNEVHIYKKEGN-DWKQTNNLVEHDLRVMGIDWAPNTNRI 215
A IT A++ + + + + + +V Y N + TN+ H +V + W+P+ R+
Sbjct: 492 AEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRL 551
Query: 216 VTCSVDRNAYVW 251
T S+D + VW
Sbjct: 552 ATGSLDNSVIVW 563
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Frame = +3
Query: 21 TFGDSCAPITCHAWNKDRSQIAFSPNNNEVHIYK-----KEGNDWKQTNNLVEHDLRVMG 185
TFG+ + +N D S A + + + +Y K G + V H V G
Sbjct: 185 TFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFG 244
Query: 186 IDWAPNTNRIVTCSVDRNAYVW 251
+ W+P+ +I + S D+ +W
Sbjct: 245 LTWSPDGTKIASASADKTIKIW 266
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = +3
Query: 48 TCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 227
+C A + D+ +A +++VH+YK G + +V H + + ++ N +V
Sbjct: 452 SCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIV-HPAEITSVAFSNNGAFLVATD 510
Query: 228 VDR 236
R
Sbjct: 511 QSR 513
>AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein.
Length = 611
Score = 35.9 bits (79), Expect = 0.035
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 39 APITCHAWNKDRSQIAFSPNNNEVHIYKKEGN-DWKQTNNLVEHDLRVMGIDWAPNTNRI 215
A IT A++ + + + + + +V Y N + TN+ H +V + W+P+ R+
Sbjct: 492 AEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRL 551
Query: 216 VTCSVDRNAYVW 251
T S+D + VW
Sbjct: 552 ATGSLDNSVIVW 563
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Frame = +3
Query: 21 TFGDSCAPITCHAWNKDRSQIAFSPNNNEVHIYK-----KEGNDWKQTNNLVEHDLRVMG 185
TFG+ + +N D S A + + + +Y K G + V H V G
Sbjct: 185 TFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFG 244
Query: 186 IDWAPNTNRIVTCSVDRNAYVW 251
+ W+P+ +I + S D+ +W
Sbjct: 245 LTWSPDGTKIASASADKTIKIW 266
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = +3
Query: 48 TCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 227
+C A + D+ +A +++VH+YK G + +V H + + ++ N +V
Sbjct: 452 SCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIV-HPAEITSVAFSNNGAFLVATD 510
Query: 228 VDR 236
R
Sbjct: 511 QSR 513
>Z81099-1|CAB03187.1| 600|Caenorhabditis elegans Hypothetical
protein K08F9.2 protein.
Length = 600
Score = 35.1 bits (77), Expect = 0.061
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +3
Query: 39 APITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQT--NNLVEHDLRVMGIDWAPNTNR 212
A IT +++ D +A + +V Y D+ T N+ H +V+ + W+P+ R
Sbjct: 481 AEITAVSFSDDGEYLAVTDLARKVIPYSVS-TDFSVTSPNSWTFHTSKVLTVAWSPDNQR 539
Query: 213 IVTCSVDRNAYVWTKEMMGNGQLLL 287
+ T S+D + +W + G +++
Sbjct: 540 LATGSIDTSVIIWDMKKPGEHPVII 564
Score = 33.1 bits (72), Expect = 0.24
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Frame = +3
Query: 60 WNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNL-----VEHDLRVMGIDWAPNTNRIVTC 224
+N D S A + ++ V +Y G D ++ L V H + + W+P+ +RI T
Sbjct: 198 YNNDGSLFASTGSDGTVVLYN--GVDGEKVGVLEDAKGVAHTGSIFALAWSPDQSRIATA 255
Query: 225 SVDRNAYVWTKEMMGNGQLLLFFCVSTEQRLA*NGLPWRTSLL 353
S D++ +W + ++ +Q+L G+ W S L
Sbjct: 256 SADKSVKIWDVSARKLERTIVMGSKIEDQQL---GIVWTKSAL 295
Score = 31.1 bits (67), Expect = 0.99
Identities = 13/63 (20%), Positives = 30/63 (47%)
Frame = +3
Query: 48 TCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 227
TC A+ ++S +A + +VH+YK G+ + +EH + + ++ + +
Sbjct: 440 TCVAFCAEKSLVAVGGKDAKVHVYKLNGDGRLEELKKIEHSAEITAVSFSDDGEYLAVTD 499
Query: 228 VDR 236
+ R
Sbjct: 500 LAR 502
>AC024214-18|AAF36083.1| 211|Caenorhabditis elegans Nuclear pore
complex protein protein20, isoform b protein.
Length = 211
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +2
Query: 266 GKWATTLVLLRINRAATCVKWSPMENKFAVGSGARL--ISICYFEKENNWWVSKHIKKPI 439
G+W + TCV ++P + + S + I I ++ +N W+S I+K
Sbjct: 92 GRWQKAYEWAAHEASTTCVAFAPHQYGLMLASASADGDIGILRYDNSSNEWISSKIQKCH 151
Query: 440 RSTVTSIDWHPNN 478
V S+ W P +
Sbjct: 152 EQGVNSVCWAPGS 164
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 6/57 (10%)
Frame = +3
Query: 117 YKKEGNDWKQTNNLVEHDLRVMGIDWAPNT------NRIVTCSVDRNAYVWTKEMMG 269
Y N+W + H+ V + WAP + R+V+ D+N +W G
Sbjct: 135 YDNSSNEWISSKIQKCHEQGVNSVCWAPGSADPAAKKRLVSAGNDKNVKIWALSQFG 191
>AC024214-17|AAF36082.1| 313|Caenorhabditis elegans Nuclear pore
complex protein protein20, isoform a protein.
Length = 313
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +2
Query: 266 GKWATTLVLLRINRAATCVKWSPMENKFAVGSGARL--ISICYFEKENNWWVSKHIKKPI 439
G+W + TCV ++P + + S + I I ++ +N W+S I+K
Sbjct: 92 GRWQKAYEWAAHEASTTCVAFAPHQYGLMLASASADGDIGILRYDNSSNEWISSKIQKCH 151
Query: 440 RSTVTSIDWHPNN 478
V S+ W P +
Sbjct: 152 EQGVNSVCWAPGS 164
>U42835-5|AAO61444.1| 517|Caenorhabditis elegans Uncoordinated
protein 78, isoform b protein.
Length = 517
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Frame = +3
Query: 21 TFGDSCAPITCHAWNKDRSQIAFSPNNNEVHIYK-----KEGNDWKQTNNLVEHDLRVMG 185
TFG+ + +N D S A + + + +Y K G + V H V G
Sbjct: 185 TFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFG 244
Query: 186 IDWAPNTNRIVTCSVDRNAYVW 251
+ W+P+ +I + S D+ +W
Sbjct: 245 LTWSPDGTKIASASADKTIKIW 266
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = +3
Query: 48 TCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 227
+C A + D+ +A +++VH+YK G + +V H + + ++ N +V
Sbjct: 452 SCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIV-HPAEITSVAFSNNGAFLVATD 510
Query: 228 VDR 236
R
Sbjct: 511 QSR 513
>AL034393-7|CAA22322.2| 337|Caenorhabditis elegans Hypothetical
protein Y18D10A.9 protein.
Length = 337
Score = 33.1 bits (72), Expect = 0.24
Identities = 14/68 (20%), Positives = 35/68 (51%)
Frame = +3
Query: 57 AWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDR 236
A++ D + + + V +Y++E ++ + N L H+ V ++ + + TCS D+
Sbjct: 74 AFSNDGKCLVSASFDASVVVYQQEDGEFAEVNKLEGHESEVKCAVFSKSDEFLATCSRDK 133
Query: 237 NAYVWTKE 260
+ + W ++
Sbjct: 134 SVWFWQQD 141
Score = 29.1 bits (62), Expect = 4.0
Identities = 21/82 (25%), Positives = 36/82 (43%)
Frame = +2
Query: 260 DDGKWATTLVLLRINRAATCVKWSPMENKFAVGSGARLISICYFEKENNWWVSKHIKKPI 439
+DG++A L C +S + A S + + +++ ++ VS I +P
Sbjct: 97 EDGEFAEVNKLEGHESEVKCAVFSKSDEFLATCSRDKSVWFWQQDEDEDFSVSS-ILQPH 155
Query: 440 RSTVTSIDWHPNNILLVAGSAD 505
V + WHP LLV+ S D
Sbjct: 156 TQDVKQVAWHPTEDLLVSCSYD 177
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +3
Query: 45 ITCHAWNKDRSQIAFSPNNNEVHIYKK-EGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVT 221
+ C ++K +A + V +++ E D+ ++ L H V + W P + +V+
Sbjct: 114 VKCAVFSKSDEFLATCSRDKSVWFWQQDEDEDFSVSSILQPHTQDVKQVAWHPTEDLLVS 173
Query: 222 CSVD 233
CS D
Sbjct: 174 CSYD 177
>Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical
protein CC4.3 protein.
Length = 510
Score = 32.7 bits (71), Expect = 0.32
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Frame = +3
Query: 60 WNKDRSQIAFSPNNNEVHIY-KKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDR 236
++KD S I N++ V ++ K G K+ H + + ++ N I++CS D
Sbjct: 315 FSKDNSHILSGGNDHVVRVHGMKSGKCLKEMRG---HSSYITDVRYSDEGNHIISCSTDG 371
Query: 237 NAYVWTKEMMGNGQLLLFFCVSTEQRLA*NGLP 335
+ VW + +G+ L F V +E N +P
Sbjct: 372 SIRVWHGK---SGECLSTFRVGSEDYPILNVIP 401
>AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein.
Length = 510
Score = 32.7 bits (71), Expect = 0.32
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Frame = +3
Query: 60 WNKDRSQIAFSPNNNEVHIY-KKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDR 236
++KD S I N++ V ++ K G K+ H + + ++ N I++CS D
Sbjct: 315 FSKDNSHILSGGNDHVVRVHGMKSGKCLKEMRG---HSSYITDVRYSDEGNHIISCSTDG 371
Query: 237 NAYVWTKEMMGNGQLLLFFCVSTEQRLA*NGLP 335
+ VW + +G+ L F V +E N +P
Sbjct: 372 SIRVWHGK---SGECLSTFRVGSEDYPILNVIP 401
>U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical
protein T10F2.4 protein.
Length = 492
Score = 31.9 bits (69), Expect = 0.56
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 138 WKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWT 254
W + +L +H V G+ + N +VTCS+D++ V++
Sbjct: 453 WSEVVSLSDHSGPVTGVRFGENARSLVTCSLDKSLRVFS 491
>Z79756-4|CAB02116.2| 478|Caenorhabditis elegans Hypothetical
protein F53C11.7 protein.
Length = 478
Score = 31.1 bits (67), Expect = 0.99
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +3
Query: 42 PITCHAWNK-DRSQIA-FSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNT-NR 212
P+ AWN+ D + IA F ++ EV I L H+ + G+ WAP++ +
Sbjct: 359 PLLRLAWNRNDHNYIATFGQDSKEVLILDLR-LPCTPVARLRNHEATINGLSWAPHSGSH 417
Query: 213 IVTCSVDRNAYVW 251
I T D A +W
Sbjct: 418 ICTAGDDYQALIW 430
>AL021481-1|CAA16333.1| 363|Caenorhabditis elegans Hypothetical
protein Y43F4B.4 protein.
Length = 363
Score = 31.1 bits (67), Expect = 0.99
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +3
Query: 120 KKEGNDWKQTNNLVEHDLRVMGIDWA-PNTNRIV-TCSVDRNAYVWTKEMM 266
K +GN W+++ + H V + WA P +IV TCS DR +W ++++
Sbjct: 47 KPDGN-WRRSAHWKCHGGAVWRVIWAHPEFGQIVATCSYDRTIVIWEEQIV 96
>AJ011523-1|CAB38019.1| 760|Caenorhabditis elegans CHE-2 protein
protein.
Length = 760
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/80 (28%), Positives = 32/80 (40%)
Frame = +3
Query: 45 ITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTC 224
+ C AW+ S + + N H Y K HD ++ DW P ++ IVT
Sbjct: 148 VYCVAWDSTSSNVLYC---NADHCYIKSLKMQVAPIKWKAHDGIILCCDWNPTSDLIVTG 204
Query: 225 SVDRNAYVWTKEMMGNGQLL 284
D VW G GQ+L
Sbjct: 205 GEDLKFKVWD----GFGQIL 220
>AC006635-2|AAK68383.1| 760|Caenorhabditis elegans Abnormal
chemotaxis protein 2 protein.
Length = 760
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/80 (28%), Positives = 32/80 (40%)
Frame = +3
Query: 45 ITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTC 224
+ C AW+ S + + N H Y K HD ++ DW P ++ IVT
Sbjct: 148 VYCVAWDSTSSNVLYC---NADHCYIKSLKMQVAPIKWKAHDGIILCCDWNPTSDLIVTG 204
Query: 225 SVDRNAYVWTKEMMGNGQLL 284
D VW G GQ+L
Sbjct: 205 GEDLKFKVWD----GFGQIL 220
>U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical
protein F13H8.2 protein.
Length = 929
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +3
Query: 99 NNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 251
NN +Y N K +L H L V +D AP++ VT SVD++ VW
Sbjct: 565 NNTCSVYFV--NTLKFFVSLYGHSLPVTCVDIAPSSKLCVTGSVDKSVKVW 613
>Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical
protein F08G12.2 protein.
Length = 331
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/85 (21%), Positives = 40/85 (47%)
Frame = +3
Query: 6 MAQTLTFGDSCAPITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMG 185
MA T+ I A++ D + +A S + ++ + G + + + + H VM
Sbjct: 28 MAPTMVLLGHEGEIYTGAFSPDGTCLATSGYDQKIFFWNVYG-ECENFSTIKGHSGAVMD 86
Query: 186 IDWAPNTNRIVTCSVDRNAYVWTKE 260
+ + +++ +V+C D++ VW E
Sbjct: 87 LKFTTDSSSLVSCGTDKSVRVWDME 111
>U23176-7|AAC46713.4| 454|Caenorhabditis elegans Hypothetical
protein F21H12.1 protein.
Length = 454
Score = 29.9 bits (64), Expect = 2.3
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = +3
Query: 21 TFGDSCAPITCHAWNKDRSQIAFSPNNNEVHIY 119
TF C P++C +W++D ++ S +N + ++
Sbjct: 62 TFSAHCLPVSCLSWSRDGRKLLTSSADNSIAMF 94
>AF399825-1|AAK77200.1| 1262|Caenorhabditis elegans separase protein.
Length = 1262
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Frame = -1
Query: 618 NWENSANSCPKGNLEPPHIRSRLIFDILDIGRED-----SYLKSAEPATSKMLLGCQSID 454
NWE + S PK N + R F + G S LK + +L+GC S+
Sbjct: 985 NWEGTVGSAPKSNEISAALSQRDAFFFIGHGSGSSVMPRSVLKQSTCNAISLLMGCGSVR 1044
Query: 453 VTVERMGF 430
+ +GF
Sbjct: 1045 TIPQALGF 1052
>AC024791-1|AAF60651.1| 1262|Caenorhabditis elegans Separase protein 1
protein.
Length = 1262
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Frame = -1
Query: 618 NWENSANSCPKGNLEPPHIRSRLIFDILDIGRED-----SYLKSAEPATSKMLLGCQSID 454
NWE + S PK N + R F + G S LK + +L+GC S+
Sbjct: 985 NWEGTVGSAPKSNEISAALSQRDAFFFIGHGSGSSVMPRSVLKQSTCNAISLLMGCGSVR 1044
Query: 453 VTVERMGF 430
+ +GF
Sbjct: 1045 TIPQALGF 1052
>AC006708-15|AAF60425.1| 504|Caenorhabditis elegans Hypothetical
protein Y110A7A.8 protein.
Length = 504
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -2
Query: 251 PDVSITV-NRTRNNTVGVGS-PINPHHSKVVFHKVVCLLP 138
P ++ V +T+ N +G + NPHH + FH++V +P
Sbjct: 254 PSCNVQVLGKTKKNLIGFSTVSTNPHHGFIYFHQLVQKMP 293
>Z81531-5|CAB04319.1| 1152|Caenorhabditis elegans Hypothetical protein
F36D3.5 protein.
Length = 1152
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +3
Query: 111 HIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTKEM 263
HI+ E D K TN+ +E + + APNT ++ D N + T ++
Sbjct: 931 HIWMDERTDNKITNDFMEKFQAITSDEAAPNTTHVIV-KTDENGVLETDDL 980
>Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical
protein C36B1.5 protein.
Length = 496
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +3
Query: 165 HDLRVMGIDWAPNTNRIVTCSVDRNAYVWTKEMMGN 272
H + ++W PN ++T S D + VW M N
Sbjct: 379 HTKEIHSVEWMPNGYEMITGSSDNSMKVWDLRMRRN 414
Score = 28.3 bits (60), Expect = 7.0
Identities = 10/40 (25%), Positives = 21/40 (52%)
Frame = +3
Query: 138 WKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTK 257
W+ L HD R++ +D +P+ + + + DR +W +
Sbjct: 454 WQPLRQLQGHDTRILCVDISPDGQWMCSSAFDRTFKLWAQ 493
>U58762-2|AAK39302.1| 722|Caenorhabditis elegans Hypothetical
protein T27F7.2b protein.
Length = 722
Score = 29.1 bits (62), Expect = 4.0
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = -1
Query: 510 LKSAEPATSKMLLGCQSIDVTVERMGFLICLDTHQLFSFSK*QI-DINLAPDPTANLFSM 334
+ S +P TS G QS+++++ +G IC + L S S ++ DI+ PD T N+
Sbjct: 167 IDSFQPTTSG---GMQSVELSISVLGVKICCEKTVLMSHSLRRVTDISARPD-TQNI--- 219
Query: 333 GDHFTQVAARLIRRRTRV 280
G T+ R RR V
Sbjct: 220 GYVATEPVGRTYRRLCHV 237
>U58762-1|AAK39301.1| 732|Caenorhabditis elegans Hypothetical
protein T27F7.2a protein.
Length = 732
Score = 29.1 bits (62), Expect = 4.0
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = -1
Query: 510 LKSAEPATSKMLLGCQSIDVTVERMGFLICLDTHQLFSFSK*QI-DINLAPDPTANLFSM 334
+ S +P TS G QS+++++ +G IC + L S S ++ DI+ PD T N+
Sbjct: 177 IDSFQPTTSG---GMQSVELSISVLGVKICCEKTVLMSHSLRRVTDISARPD-TQNI--- 229
Query: 333 GDHFTQVAARLIRRRTRV 280
G T+ R RR V
Sbjct: 230 GYVATEPVGRTYRRLCHV 247
>U21321-1|AAG00051.1| 507|Caenorhabditis elegans Fizzy (cdc20
protein family) homologprotein 1 protein.
Length = 507
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +3
Query: 99 NNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 251
N++V I + + W N H V ++W+ + N V+ S DR A +W
Sbjct: 295 NHDVRISQHVVSSWGGDNG---HCRDVTALEWSADENMCVSGSSDRTAKIW 342
>AF067942-4|AAG45573.2| 324|Caenorhabditis elegans Hypothetical
protein ZK6.6 protein.
Length = 324
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 405 IGGCLSILRSPFVRL*HLLIGIPI 476
+G C SPF+ L H +IGIP+
Sbjct: 255 LGSCFIFFLSPFLNLYHYVIGIPL 278
>Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical
protein R06A4.9 protein.
Length = 809
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +2
Query: 326 WSPMENKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHPNNILLVAGSAD 505
++P + KFA S + F + + + + + + V IDWHP L+ GS D
Sbjct: 225 FAPTDVKFATASDDGTARVWDFAR----YTEERVLRGHGAEVRCIDWHPTKGLIATGSRD 280
>Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical
protein ZK1307.6 protein.
Length = 702
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/69 (23%), Positives = 25/69 (36%)
Frame = +3
Query: 45 ITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTC 224
+ C AWN D I + + +D L H V G+ W+P+ + +
Sbjct: 483 VGCLAWNADT--ICSGSRDRTIMHRDIRCDDNDMGRKLTNHRQEVCGLKWSPDKQLLASG 540
Query: 225 SVDRNAYVW 251
D VW
Sbjct: 541 GNDNQLLVW 549
>Z35663-5|CAA84727.1| 681|Caenorhabditis elegans Hypothetical
protein T04A8.7a protein.
Length = 681
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +3
Query: 132 NDWKQTNNLVEHDLRVMGIDWAPNTNRIVTC----SVDRNAYVWTKEMMG 269
+ +KQ V+ D V G++WAP ++ + D+NA V+ KE G
Sbjct: 51 SSYKQFGLNVQPDNSVKGLEWAPAAEKLALIGDFNNWDQNANVYKKEEHG 100
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,372,412
Number of Sequences: 27780
Number of extensions: 475170
Number of successful extensions: 1301
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1296
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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