Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0367
(816 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g31300.1 68415.m03821 transducin family protein / WD-40 repea... 127 1e-29
At2g30910.2 68415.m03768 transducin family protein / WD-40 repea... 127 1e-29
At2g30910.1 68415.m03767 transducin family protein / WD-40 repea... 127 1e-29
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 39 0.003
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 37 0.014
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 36 0.042
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 36 0.042
At3g56900.1 68416.m06329 aladin-related / adracalin-related weak... 35 0.074
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 34 0.13
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 33 0.17
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 33 0.17
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 33 0.23
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 33 0.23
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 33 0.30
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 33 0.30
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 33 0.30
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 32 0.40
At2g19580.1 68415.m02287 senescence-associated protein-related s... 32 0.40
At2g20800.1 68415.m02446 pyridine nucleotide-disulphide oxidored... 31 0.69
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 31 0.91
At5g05090.1 68418.m00540 myb family transcription factor contain... 31 0.91
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 31 0.91
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 31 0.91
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 31 0.91
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 31 0.91
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 31 0.91
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 31 0.91
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 31 1.2
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 31 1.2
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 31 1.2
At3g10760.1 68416.m01295 myb family transcription factor contain... 31 1.2
At4g19660.1 68417.m02888 ankyrin repeat family protein / BTB/POZ... 30 1.6
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 30 1.6
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 30 2.1
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 30 2.1
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 29 2.8
At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pf... 29 3.7
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 29 3.7
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 29 3.7
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 29 3.7
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 29 4.9
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 29 4.9
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 29 4.9
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 29 4.9
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 29 4.9
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 29 4.9
At1g76140.1 68414.m08842 prolyl oligopeptidase, putative / proly... 29 4.9
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 29 4.9
At5g45290.1 68418.m05560 zinc finger (C3HC4-type RING finger) fa... 28 6.4
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 28 6.4
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 28 6.4
At1g48880.1 68414.m05476 hypothetical protein 28 6.4
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 28 8.5
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 28 8.5
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 28 8.5
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 28 8.5
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 28 8.5
At1g68210.1 68414.m07792 two-component responsive regulator fami... 28 8.5
>At2g31300.1 68415.m03821 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
identical to putative ARP2/3 protein complex subunit p41
(GI:4432825)[Arabidopsis thaliana]; similar to ARP2/3
complex 41 kDa subunit (P41-ARC) (Actin-related protein
2/3 complex subunit 1B) (SP:Q9WV32) [Mus musculus]
Length = 378
Score = 127 bits (306), Expect = 1e-29
Identities = 53/84 (63%), Positives = 66/84 (78%)
Frame = +2
Query: 260 DDGKWATTLVLLRINRAATCVKWSPMENKFAVGSGARLISICYFEKENNWWVSKHIKKPI 439
+ +W TLV+LR+NRAA CV+WSP ENKFAVGSGA+ + ICY+E+ENNWWVSK I+K
Sbjct: 85 EGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH 144
Query: 440 RSTVTSIDWHPNNILLVAGSADFK 511
S+VTS+ WHPNN+LL S D K
Sbjct: 145 ESSVTSVAWHPNNVLLATTSTDGK 168
Score = 91.5 bits (217), Expect = 6e-19
Identities = 40/73 (54%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Frame = +3
Query: 45 ITCHAWNKDRSQIAFSPNNNEVHIYKKEGND-WKQTNNLVEHDLRVMGIDWAPNTNRIVT 221
ITCHAW+ D S +A PNN EVHIYK D W++ + L +HD V GIDW+ +N+IVT
Sbjct: 13 ITCHAWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSGIDWSSKSNKIVT 72
Query: 222 CSVDRNAYVWTKE 260
S DRN+YVW+ E
Sbjct: 73 VSHDRNSYVWSLE 85
Score = 32.3 bits (70), Expect = 0.40
Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Frame = +3
Query: 51 CHAWNKDRSQIAFSPNNNEVHI--YKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTC 224
C W+ ++ A V I Y++E N W H+ V + W PN + T
Sbjct: 104 CVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATT 163
Query: 225 SVDRNAYVWTKEMMG 269
S D V++ + G
Sbjct: 164 STDGKCRVFSTFIKG 178
>At2g30910.2 68415.m03768 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 127 bits (306), Expect = 1e-29
Identities = 53/84 (63%), Positives = 66/84 (78%)
Frame = +2
Query: 260 DDGKWATTLVLLRINRAATCVKWSPMENKFAVGSGARLISICYFEKENNWWVSKHIKKPI 439
+ +W TLV+LR+NRAA CV+WSP ENKFAVGSGA+ + ICY+E+ENNWWVSK I+K
Sbjct: 85 EGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH 144
Query: 440 RSTVTSIDWHPNNILLVAGSADFK 511
S+VTS+ WHPNN+LL S D K
Sbjct: 145 ESSVTSVAWHPNNVLLATTSTDGK 168
Score = 91.5 bits (217), Expect = 6e-19
Identities = 40/73 (54%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Frame = +3
Query: 45 ITCHAWNKDRSQIAFSPNNNEVHIYKKEGND-WKQTNNLVEHDLRVMGIDWAPNTNRIVT 221
ITCHAW+ D S +A PNN EVHIYK D W++ + L +HD V GIDW+ +N+IVT
Sbjct: 13 ITCHAWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSGIDWSSKSNKIVT 72
Query: 222 CSVDRNAYVWTKE 260
S DRN+YVW+ E
Sbjct: 73 VSHDRNSYVWSLE 85
Score = 32.3 bits (70), Expect = 0.40
Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Frame = +3
Query: 51 CHAWNKDRSQIAFSPNNNEVHI--YKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTC 224
C W+ ++ A V I Y++E N W H+ V + W PN + T
Sbjct: 104 CVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATT 163
Query: 225 SVDRNAYVWTKEMMG 269
S D V++ + G
Sbjct: 164 STDGKCRVFSTFIKG 178
>At2g30910.1 68415.m03767 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 127 bits (306), Expect = 1e-29
Identities = 53/84 (63%), Positives = 66/84 (78%)
Frame = +2
Query: 260 DDGKWATTLVLLRINRAATCVKWSPMENKFAVGSGARLISICYFEKENNWWVSKHIKKPI 439
+ +W TLV+LR+NRAA CV+WSP ENKFAVGSGA+ + ICY+E+ENNWWVSK I+K
Sbjct: 85 EGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH 144
Query: 440 RSTVTSIDWHPNNILLVAGSADFK 511
S+VTS+ WHPNN+LL S D K
Sbjct: 145 ESSVTSVAWHPNNVLLATTSTDGK 168
Score = 91.5 bits (217), Expect = 6e-19
Identities = 40/73 (54%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Frame = +3
Query: 45 ITCHAWNKDRSQIAFSPNNNEVHIYKKEGND-WKQTNNLVEHDLRVMGIDWAPNTNRIVT 221
ITCHAW+ D S +A PNN EVHIYK D W++ + L +HD V GIDW+ +N+IVT
Sbjct: 13 ITCHAWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSGIDWSSKSNKIVT 72
Query: 222 CSVDRNAYVWTKE 260
S DRN+YVW+ E
Sbjct: 73 VSHDRNSYVWSLE 85
Score = 32.3 bits (70), Expect = 0.40
Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Frame = +3
Query: 51 CHAWNKDRSQIAFSPNNNEVHI--YKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTC 224
C W+ ++ A V I Y++E N W H+ V + W PN + T
Sbjct: 104 CVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATT 163
Query: 225 SVDRNAYVWTKEMMG 269
S D V++ + G
Sbjct: 164 STDGKCRVFSTFIKG 178
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/65 (23%), Positives = 34/65 (52%)
Frame = +3
Query: 57 AWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDR 236
AW+ +A + + I+K G++++ + L H+ V + W + + + TCS D+
Sbjct: 81 AWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRDK 140
Query: 237 NAYVW 251
+ ++W
Sbjct: 141 SVWIW 145
Score = 37.5 bits (83), Expect = 0.011
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 57 AWNKDRSQIAFSPNNNEVHIYKK-EGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVD 233
+WN S +A + V I++ EGN++ L H V + W P + + +CS D
Sbjct: 125 SWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYD 184
Query: 234 RNAYVWTKE 260
VW E
Sbjct: 185 NTIKVWWSE 193
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 37.1 bits (82), Expect = 0.014
Identities = 18/69 (26%), Positives = 33/69 (47%)
Frame = +3
Query: 45 ITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTC 224
+T ++ D + A N E ++ +E K NN++ H R+ + W+PN + T
Sbjct: 359 LTVIRYSPDLTMFASGDANREAVVWDRETKQVK-LNNMLFHTARINSLAWSPNNKMVATG 417
Query: 225 SVDRNAYVW 251
S+D V+
Sbjct: 418 SIDTCVIVY 426
Score = 34.3 bits (75), Expect = 0.098
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +3
Query: 45 ITCHAWNKDRSQIAFSPNNNEVHIYK-KEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVT 221
+ C ++ D ++ ++ + IY K G+ + + H + + W+P++ R++T
Sbjct: 54 VNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSKRVLT 113
Query: 222 CSVDRNAYVW 251
S D++A VW
Sbjct: 114 VSADKSAKVW 123
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 35.5 bits (78), Expect = 0.042
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 168 DLRVMGIDWAPNTNRIVTCSVDRNAYVW 251
DL+V +DW P NRIV+ S D VW
Sbjct: 3 DLQVYSLDWTPERNRIVSASQDGRLIVW 30
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 35.5 bits (78), Expect = 0.042
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +3
Query: 45 ITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWA-PNTNR-IV 218
+T AW+ D + + S + +H+Y +G+D +Q + H V + +A PN +V
Sbjct: 412 VTRVAWSPDGNLLGVSFTKHLIHVYAYQGSDLRQHLEIDAHVGCVNDLAFAHPNKQMCVV 471
Query: 219 TCSVDRNAYVW 251
TC D+ VW
Sbjct: 472 TCGDDKLIKVW 482
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +2
Query: 443 STVTSIDWHPNNILLVAGSADFKYESSLPISRISKISLDRM--CGG 574
++VT W PN+ LL+A E S+P +SK M CGG
Sbjct: 807 ASVTPQHWQPNSGLLMANDVPENPEGSVPCIALSKNDSYVMSACGG 852
>At3g56900.1 68416.m06329 aladin-related / adracalin-related weak
similarity to SP|Q9NRG9 Aladin (Adracalin) (GL003) {Homo
sapiens}; non-consensus AT-AC splice sites at intron 6
Length = 447
Score = 34.7 bits (76), Expect = 0.074
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +3
Query: 57 AWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLR-VMGIDWAPNTNRIVTCSVD 233
+W++ + IAF N+V I E D K+ L R V ++W PN + ++ +
Sbjct: 106 SWHQGKHIIAFISGANQVTIRDYEDKDEKEPCILTSDSQRNVKALEWRPNGGKSLSIACR 165
Query: 234 RNAYVWTKEMMGNGQLL 284
+W GN L+
Sbjct: 166 GGICIWAASYPGNMALV 182
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Frame = +3
Query: 72 RSQIAFSPNNNEVHIYK----KEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRN 239
R +A + E+ I+K + WK +L H V+ + W+P+ +++ SVD +
Sbjct: 17 RELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNS 76
Query: 240 AYVWTKEMMGNGQLLLFFC 296
+W Q+L C
Sbjct: 77 CIIWDVNKGSVHQILDAHC 95
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/79 (22%), Positives = 36/79 (45%)
Frame = +3
Query: 33 SCAPITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNR 212
S +TC ++ D +A + ++ + ++ + K L EH + I ++P+ R
Sbjct: 650 STTKVTCCHFSSDGKMLASAGHDKKAVLWYTD--TMKPKTTLEEHTAMITDIRFSPSQLR 707
Query: 213 IVTCSVDRNAYVWTKEMMG 269
+ T S D+ VW + G
Sbjct: 708 LATSSFDKTVRVWDADNKG 726
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/92 (20%), Positives = 40/92 (43%), Gaps = 15/92 (16%)
Frame = +3
Query: 21 TFGDSCAPITCHAWNKDRSQIAFSPNNNEVHIY-KKEGN--------------DWKQTNN 155
T D + C W K+ +A ++ + I+ +K G+ +WK
Sbjct: 54 TLRDHFGSVNCVRWAKNSRYVASGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWKAVMT 113
Query: 156 LVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 251
L H V+ ++W+P+ + + + S+D ++W
Sbjct: 114 LRGHTADVVDLNWSPDDSMLASGSLDNTVHIW 145
Score = 31.5 bits (68), Expect = 0.69
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +3
Query: 60 WNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRN 239
W+ D S +A +N VHI+ T L H V G+ W P + I + S D+
Sbjct: 126 WSPDDSMLASGSLDNTVHIWNMRTG--MCTTVLRGHLSLVKGVTWDPIGSFIASQSDDKT 183
Query: 240 AYVW 251
+W
Sbjct: 184 VIIW 187
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 33.1 bits (72), Expect = 0.23
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 165 HDLRVMGIDWAPNTNRIVTCSVDRNAYVW 251
H +V +DW P NRIV+ S D VW
Sbjct: 64 HTGKVYSLDWTPERNRIVSASQDGRLIVW 92
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 33.1 bits (72), Expect = 0.23
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 165 HDLRVMGIDWAPNTNRIVTCSVDRNAYVW 251
H +V +DW P NRIV+ S D VW
Sbjct: 64 HTGKVYSLDWTPERNRIVSASQDGRLIVW 92
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 32.7 bits (71), Expect = 0.30
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = +3
Query: 81 IAFSPNNNEVHIYK----KEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYV 248
+A + E+ I+K + WK +L H V+ + W+P+ +++ SVD + +
Sbjct: 79 LASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCII 138
Query: 249 WTKEMMGNGQLLLFFC 296
W Q+L C
Sbjct: 139 WDVNKGSVHQILDAHC 154
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 32.7 bits (71), Expect = 0.30
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = +3
Query: 81 IAFSPNNNEVHIYK----KEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYV 248
+A + E+ I+K + WK +L H V+ + W+P+ +++ SVD + +
Sbjct: 79 LASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCII 138
Query: 249 WTKEMMGNGQLLLFFC 296
W Q+L C
Sbjct: 139 WDVNKGSVHQILDAHC 154
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 32.7 bits (71), Expect = 0.30
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +3
Query: 165 HDLRVMGIDWAPNTNRIVTCSVDRNAYVWTKEMMGNGQL 281
H + + W+P+ +++T S D++A +W G+G L
Sbjct: 231 HKGSIYAVSWSPDGKQVLTVSADKSAKIWDISDNGSGSL 269
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/60 (21%), Positives = 28/60 (46%)
Frame = +3
Query: 72 RSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 251
R+ ++F+ ++ + IY + + + H V + W P + + +CS D A +W
Sbjct: 416 RNNVSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIW 475
Score = 31.1 bits (67), Expect = 0.91
Identities = 17/69 (24%), Positives = 32/69 (46%)
Frame = +3
Query: 45 ITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTC 224
+T WN + + +A + + I+ G + + L +H + + W + ++T
Sbjct: 327 VTTLDWNGEGTLLATGSCDGQARIWTLNG---ELISTLSKHKGPIFSLKWNKKGDYLLTG 383
Query: 225 SVDRNAYVW 251
SVDR A VW
Sbjct: 384 SVDRTAVVW 392
>At2g19580.1 68415.m02287 senescence-associated protein-related
similar to senescence-associated protein 5 [Hemerocallis
hybrid cultivar] gi|3551954|gb|AAC34855; contains a
transmembrane 4 family signature; rare (GC) splice donor
consensus found instead of (GT) at intron 2.
Length = 270
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/68 (23%), Positives = 35/68 (51%)
Frame = +3
Query: 39 APITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIV 218
A C+ W+ D+SQ+ ++ N+ + + +W++ N ++ + V+ + W ++
Sbjct: 195 ADADCYLWSNDQSQLCYNCNSCKAGLLGNLRKEWRKANLIL--IITVVVLIWV----YVI 248
Query: 219 TCSVDRNA 242
CS RNA
Sbjct: 249 ACSAFRNA 256
>At2g20800.1 68415.m02446 pyridine nucleotide-disulphide
oxidoreductase family protein similar to GI:3718005
alternative NADH-dehydrogenase {Yarrowia lipolytica} ;
contains Pfam profile PF00070: Pyridine
nucleotide-disulphide oxidoreductase
Length = 582
Score = 31.5 bits (68), Expect = 0.69
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 66 KDRSQIAFSPNNNEVHIYKKEGNDWKQTNNL-VEHDLRVMGIDWAPNTNRIVTCSVDRNA 242
K+ + +N ++H KEG+ K T +++D+ ++ + PNT T V+ +A
Sbjct: 133 KEAECVKIDASNKKIHCRSKEGSSLKGTTEFDMDYDILILAVGAKPNT--FNTPGVEEHA 190
Query: 243 Y 245
Y
Sbjct: 191 Y 191
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 31.1 bits (67), Expect = 0.91
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +3
Query: 9 AQTLTFGDSCAPITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLV-EHDLRVMG 185
++ +T + P+T W +D +A +N+EV ++ N +Q L+ H+ RV
Sbjct: 156 SELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDFVSN--RQVRTLIGGHESRVGS 213
Query: 186 IDWAPNTNRIVTCSVD 233
+ W N + + T +D
Sbjct: 214 LAW--NNHILTTGGMD 227
>At5g05090.1 68418.m00540 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 266
Score = 31.1 bits (67), Expect = 0.91
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -2
Query: 287 QE*LPISHHLLSPDVSITVNRTRNNTVGVGSPI 189
+E +P+S L++PD++I + RNN G P+
Sbjct: 20 EELIPLSQSLITPDLAIAFDLHRNNNSNSGQPL 52
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 31.1 bits (67), Expect = 0.91
Identities = 16/73 (21%), Positives = 36/73 (49%)
Frame = +3
Query: 33 SCAPITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNR 212
S + + C +++ D +A + ++ +V I+ E + T EH + + + PN+ +
Sbjct: 507 SASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPE--EHAHIITDVRFRPNSTQ 564
Query: 213 IVTCSVDRNAYVW 251
+ T S D+ +W
Sbjct: 565 LATSSFDKTIKIW 577
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 31.1 bits (67), Expect = 0.91
Identities = 16/73 (21%), Positives = 36/73 (49%)
Frame = +3
Query: 33 SCAPITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNR 212
S + + C +++ D +A + ++ +V I+ E + T EH + + + PN+ +
Sbjct: 509 SASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPE--EHAHIITDVRFRPNSTQ 566
Query: 213 IVTCSVDRNAYVW 251
+ T S D+ +W
Sbjct: 567 LATSSFDKTIKIW 579
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 31.1 bits (67), Expect = 0.91
Identities = 16/73 (21%), Positives = 36/73 (49%)
Frame = +3
Query: 33 SCAPITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNR 212
S + + C +++ D +A + ++ +V I+ E + T EH + + + PN+ +
Sbjct: 509 SASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPE--EHAHIITDVRFRPNSTQ 566
Query: 213 IVTCSVDRNAYVW 251
+ T S D+ +W
Sbjct: 567 LATSSFDKTIKIW 579
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 31.1 bits (67), Expect = 0.91
Identities = 16/73 (21%), Positives = 36/73 (49%)
Frame = +3
Query: 33 SCAPITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNR 212
S + + C +++ D +A + ++ +V I+ E + T EH + + + PN+ +
Sbjct: 509 SASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPE--EHAHIITDVRFRPNSTQ 566
Query: 213 IVTCSVDRNAYVW 251
+ T S D+ +W
Sbjct: 567 LATSSFDKTIKIW 579
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 31.1 bits (67), Expect = 0.91
Identities = 16/73 (21%), Positives = 36/73 (49%)
Frame = +3
Query: 33 SCAPITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNR 212
S + + C +++ D +A + ++ +V I+ E + T EH + + + PN+ +
Sbjct: 509 SASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPE--EHAHIITDVRFRPNSTQ 566
Query: 213 IVTCSVDRNAYVW 251
+ T S D+ +W
Sbjct: 567 LATSSFDKTIKIW 579
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 31.1 bits (67), Expect = 0.91
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 380 ICYFEKENNWWVSKHIKKPIRSTVTSIDWHPNNI--LLVAGSAD 505
I + E N W H+ +S+V SI W P++I L GS+D
Sbjct: 83 ILWKEGNQNQWTQDHVFTDHKSSVNSIAWAPHDIGLSLACGSSD 126
Score = 27.9 bits (59), Expect = 8.5
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Frame = +3
Query: 12 QTLTFGDSCAPITCHAWNKDR--SQIAFSPNNNEVHIYKKEG-NDWKQTNNLVEHDLRVM 182
Q T P+ AW + S +A + +V ++K+ N W Q + +H V
Sbjct: 48 QLATLTGHRGPVWEVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVN 107
Query: 183 GIDWAPNTNRI-VTC-SVDRNAYVWTKEMMG 269
I WAP+ + + C S D N V+T G
Sbjct: 108 SIAWAPHDIGLSLACGSSDGNISVFTARADG 138
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +3
Query: 9 AQTLTFGDSCAPITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLV-EHDLRVMG 185
++ +T + P+T W D +A NN+EV ++ N +Q L H RV
Sbjct: 173 SELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASN--RQLRTLKGGHQSRVGS 230
Query: 186 IDWAPNTNRIVTCSVD 233
+ W N + + T +D
Sbjct: 231 LAW--NNHILTTGGMD 244
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = +3
Query: 60 WNKDRSQIAFSPNNNEVHIYKK---EGNDWKQ-TNNLVEHDLRVMGIDWAP 200
W+ Q+A N+N VHI+ + N Q + L EH V + W P
Sbjct: 274 WSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCP 324
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +3
Query: 9 AQTLTFGDSCAPITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLV-EHDLRVMG 185
++ +T + P+T W D +A NN+EV ++ N +Q L H RV
Sbjct: 163 SELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASN--RQLRTLKGGHQSRVGS 220
Query: 186 IDWAPNTNRIVTCSVD 233
+ W N + + T +D
Sbjct: 221 LAW--NNHILTTGGMD 234
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = +3
Query: 60 WNKDRSQIAFSPNNNEVHIYKK---EGNDWKQ-TNNLVEHDLRVMGIDWAP 200
W+ Q+A N+N VHI+ + N Q + L EH V + W P
Sbjct: 264 WSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCP 314
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +3
Query: 57 AWNKDRSQIAFSPNNNEVHIYK---KEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 227
+WN S +A + V I++ +E +++ L H V + W P + + +CS
Sbjct: 99 SWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVLWHPTMDVLFSCS 158
Query: 228 VDRNAYVWTKE 260
D +W E
Sbjct: 159 YDNTIKIWCSE 169
Score = 29.1 bits (62), Expect = 3.7
Identities = 9/46 (19%), Positives = 23/46 (50%)
Frame = +3
Query: 114 IYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 251
+++ D + + L H+ V + W + + + TC D++ ++W
Sbjct: 74 VWENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIW 119
>At3g10760.1 68416.m01295 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 335
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -2
Query: 287 QE*LPISHHLLSPDVSITVN-RTRNNTVGVGSPINPHH 177
+E +PIS L+SPD+++ + RT N+ G G+ PHH
Sbjct: 20 EELMPISQSLISPDLALAFDIRTPNH--GNGNSNQPHH 55
>At4g19660.1 68417.m02888 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain, PF00023:
Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
Length = 601
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +2
Query: 479 ILLVAGSADFKYESSLPISRISKISLDRMCGGSKLPLGQLLAEFSQFRLQ 628
ILLVA D I R+++ LDR C +LPL ++L + Q R++
Sbjct: 191 ILLVAFHCDLTQLLDQCIERVARSDLDRFCIEKELPL-EVLEKIKQLRVK 239
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 129 GNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWT 254
G D+ +L H+ +V +D +++ I T S DR +WT
Sbjct: 495 GRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWT 536
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +3
Query: 9 AQTLTFGDSCAPITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGI 188
++ +T D P+T W +D +A +N+EV ++ N +T H+ RV +
Sbjct: 143 SKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTLR-GGHESRVGSL 201
Query: 189 DWAPNTNRIVTCSVD 233
W N + + T +D
Sbjct: 202 AW--NNHILTTGGMD 214
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 449 VTSIDWHPNNILLVAGSAD 505
V S+DWHP LLV+G D
Sbjct: 271 VKSVDWHPTKSLLVSGGKD 289
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/65 (24%), Positives = 27/65 (41%)
Frame = +3
Query: 42 PITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVT 221
P+ C AW D + + + + ++ Q + + HD I W P N +VT
Sbjct: 75 PVLCSAWKDDGTTVFTGGCDKQAKMWPLLSG--AQPSTVAMHDAPFNQIAWIPGMNLLVT 132
Query: 222 CSVDR 236
S D+
Sbjct: 133 GSWDK 137
>At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 512
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/70 (21%), Positives = 31/70 (44%)
Frame = +3
Query: 30 DSCAPITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTN 209
+S + + +W+ D I + +H++ N K T ++ H RV +W +
Sbjct: 436 ESQSALINQSWSPDGLYITSGSVDPVIHVFDIRYNARKPTQSIKAHQKRVFKAEWHYSQP 495
Query: 210 RIVTCSVDRN 239
+++ S D N
Sbjct: 496 LLISISSDLN 505
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 29.1 bits (62), Expect = 3.7
Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 12/95 (12%)
Frame = +3
Query: 3 KMAQTLTFGDSCAPITCHAWNKDRSQIAFSPNN--NEVHIYKKEGNDWKQTNN---LVEH 167
+MA + + C T W S + + NE+ +++ G D ++ H
Sbjct: 168 RMAFEIQSPERCLLYTMRLWGDSISTLRIASGTIFNEIIVWRAVGLDGDNVDHGHYSASH 227
Query: 168 DLRVMG-------IDWAPNTNRIVTCSVDRNAYVW 251
LR+ G I W+ + ++IV+ S DR+A +W
Sbjct: 228 MLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIW 262
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 29.1 bits (62), Expect = 3.7
Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 12/95 (12%)
Frame = +3
Query: 3 KMAQTLTFGDSCAPITCHAWNKDRSQIAFSPNN--NEVHIYKKEGNDWKQTNN---LVEH 167
+MA + + C T W S + + NE+ +++ G D ++ H
Sbjct: 168 RMAFEIQSPERCLLYTMRLWGDSISTLRIASGTIFNEIIVWRAVGLDGDNVDHGHYSASH 227
Query: 168 DLRVMG-------IDWAPNTNRIVTCSVDRNAYVW 251
LR+ G I W+ + ++IV+ S DR+A +W
Sbjct: 228 MLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIW 262
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 114 IYKKEGN--DWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVW 251
+Y+K+G+ + + L H V + ++PN+ +I+T S D + VW
Sbjct: 269 VYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVW 316
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 135 DWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTK 257
D K + HDL V + + P + ++T SVD VW K
Sbjct: 259 DAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTIRVWKK 299
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +3
Query: 165 HDLRVMGIDWAPNTNRIVTCSVDRNAYVWTKEMMGNGQ 278
H +V + W N ++ + SVD+ A +W E G+ +
Sbjct: 19 HKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSK 56
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/53 (22%), Positives = 26/53 (49%)
Frame = +3
Query: 60 WNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIV 218
W+ D ++A N+N++ ++ + L EH V I W+P+ + ++
Sbjct: 306 WSHDDRELASGGNDNQLLVWNNHSQ--QPILKLTEHTAAVKAITWSPHQSSLL 356
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 422 HIKKPIRSTVTSIDWHPNNILLVAGSAD 505
H K + S+D+HP+ LL GSAD
Sbjct: 272 HEFKSHEGKIQSLDFHPHEFLLATGSAD 299
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/74 (21%), Positives = 34/74 (45%)
Frame = +3
Query: 30 DSCAPITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTN 209
D+C+ + AW+K+ +++ + ++ I + + L H RV+ + +P+
Sbjct: 419 DTCSQVCNLAWSKNVNELVSTHGYSQNQIIVWKYPTMSKIATLTGHTYRVLYLAVSPDGQ 478
Query: 210 RIVTCSVDRNAYVW 251
IVT + D W
Sbjct: 479 TIVTGAGDETLRFW 492
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +3
Query: 60 WNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRN 239
W+ D +A N+V +Y + + K +H + + WAPN I T +D+
Sbjct: 203 WSPDGRTLAVPGLRNDVVMYDRFTGE-KLFALRGDHLEAICYLTWAPNGKYIATSGLDKQ 261
Query: 240 AYVW 251
+W
Sbjct: 262 VLLW 265
>At1g76140.1 68414.m08842 prolyl oligopeptidase, putative / prolyl
endopeptidase, putative / post-proline cleaving enzyme,
putative similar to SP|Q9QUR6 Prolyl endopeptidase (EC
3.4.21.26) (Post-proline cleaving enzyme) {Mus
musculus}; contains Pfam profiles PF00326: prolyl
oligopeptidase family, PF02897: Prolyl oligopeptidase,
N-terminal beta-propeller domain
Length = 731
Score = 28.7 bits (61), Expect = 4.9
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +3
Query: 90 SPNNNEVHIYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTKEMMG 269
+P V + KE N W T+ + EH+ V+ A N N +V C + ++ +
Sbjct: 324 APKYKLVRVDLKEPNSW--TDVVEEHEKDVLASACAVNGNHLVACYMSDVKHILQIRDLK 381
Query: 270 NGQLL 284
+G LL
Sbjct: 382 SGSLL 386
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +3
Query: 114 IYKKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSVDRNAYVWTKEMMGNGQL 281
I+ E WK L H L V ++++ + +++ S DR+ V++ + NG++
Sbjct: 629 IWLWEVGTWKAVGRLQSHSLTVTHLEFSYDDTLLLSVSRDRHFSVFSIQRTDNGEV 684
>At5g45290.1 68418.m05560 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 545
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 613 PISPSGGGWGPQ-RFLLCGRE*SCLGSPTTAQFNVTDGTKR 732
P S SGGG + + L CG SCL S +T+ ++ D ++
Sbjct: 27 PSSSSGGGRRRRSKSLFCGLHSSCLASSSTSHYSDDDNDEQ 67
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 186 IDWAPNTNRIVTCSVDRNAYVW 251
+DW PN N I T S D+ +W
Sbjct: 505 VDWHPNCNYIATGSSDKTVRLW 526
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +3
Query: 165 HDLRVMGIDWAPN-TNRIVTCSVDRNAYVWTKE 260
HD V +DW+P+ ++ T S D +W E
Sbjct: 380 HDFEVTAVDWSPSEIGKVATASDDFTVRLWNIE 412
>At1g48880.1 68414.m05476 hypothetical protein
Length = 485
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/55 (23%), Positives = 24/55 (43%)
Frame = +2
Query: 272 WATTLVLLRINRAATCVKWSPMENKFAVGSGARLISICYFEKENNWWVSKHIKKP 436
W L+ + SP+EN ++ +++ IC F + +N + K I P
Sbjct: 431 WNEILLFFLFRQPVRSCSSSPLENSISILLCLKILLICRFSEVDNCNIEKKINDP 485
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +3
Query: 18 LTFGDSCAPITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNL-VEHDLRVMGIDW 194
+T + P+T W +D +A +N+EV ++ N +Q L H+ RV + W
Sbjct: 128 VTIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLWDCVSN--RQVRTLRGGHESRVGSLAW 185
Query: 195 APNTNRIVTCSVD 233
N + + T +D
Sbjct: 186 --NNHILTTGGMD 196
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 9 AQTLTFGDSCAPITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQTNNL-VEHDLRVMG 185
++ +T + P+T W +D +A +N+EV ++ N +Q L H+ RV
Sbjct: 159 SELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDCVSN--RQVRTLRGGHESRVGS 216
Query: 186 IDW 194
+ W
Sbjct: 217 LAW 219
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +3
Query: 60 WNKDRSQIAFSPNNNEVHIYKKEGNDWKQT----NNLVEHDLRVMGIDWAP 200
W++ ++ A N+N VHI+ + KQT + EH V + W P
Sbjct: 260 WSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAWCP 310
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 449 VTSIDWHPNNILLVAGSAD 505
+ S+D+HP+ LL GSAD
Sbjct: 188 IQSLDFHPHEFLLATGSAD 206
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 449 VTSIDWHPNNILLVAGSAD 505
+ S+D+HP+ LL GSAD
Sbjct: 188 IQSLDFHPHEFLLATGSAD 206
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +3
Query: 42 PITCHAWNKDR--SQIAFSPNNNEVHIYKKEG-NDWKQTNNLVEHDLRVMGIDWAPN 203
P+ AW + S +A + ++ ++K+ N W Q + +H + V I WAP+
Sbjct: 58 PVWQVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAPH 114
>At1g68210.1 68414.m07792 two-component responsive regulator family
protein / response regulator family protein contains
Pfam profile: PF00072 response regulator receiver domain
Length = 663
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = +3
Query: 30 DSCAPITCHAWNKDRSQIAFSPNNNEVHIYKKEGNDWKQ-TNNLVEHDLRVMGIDWAPNT 206
DS P+ K+ ++ +P N + + DW NL HD+ + +DW P+T
Sbjct: 386 DSFDPLVDECLMKENNRFLPNPTMNLLDT-DIDKMDWVSFIENLSHHDINMNHMDWDPST 444
Query: 207 NRIVTCSVDRN 239
V + N
Sbjct: 445 ANYVLPETNMN 455
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,342,800
Number of Sequences: 28952
Number of extensions: 443238
Number of successful extensions: 1338
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 1198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1332
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1863090400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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