Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0366
(529 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 164 1e-39
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 151 7e-36
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 148 9e-35
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 132 5e-30
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 128 1e-28
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 126 4e-28
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 104 1e-21
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 100 2e-20
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 92 6e-18
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 89 8e-17
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 84 2e-15
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 79 8e-14
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 77 3e-13
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 75 1e-12
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 74 2e-12
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 74 2e-12
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 74 2e-12
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 72 9e-12
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 69 5e-11
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 68 1e-10
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 68 2e-10
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 67 3e-10
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 66 5e-10
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 66 6e-10
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 66 6e-10
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 64 2e-09
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 63 3e-09
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 62 6e-09
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 61 2e-08
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 60 2e-08
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 59 5e-08
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 58 2e-07
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 56 4e-07
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 56 5e-07
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 54 2e-06
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 54 2e-06
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 53 4e-06
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 52 6e-06
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 51 2e-05
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 51 2e-05
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 49 6e-05
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 49 6e-05
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 49 6e-05
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 49 8e-05
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 49 8e-05
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 48 1e-04
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 48 2e-04
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 47 2e-04
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 46 5e-04
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 46 5e-04
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 45 0.001
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 44 0.002
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 44 0.002
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 44 0.003
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 43 0.004
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 43 0.004
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 43 0.005
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 42 0.012
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 41 0.015
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 40 0.027
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 38 0.19
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 38 0.19
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.19
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 38 0.19
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.25
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 37 0.25
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 37 0.33
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 36 0.44
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 36 0.58
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 36 0.76
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.0
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 35 1.3
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 1.3
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 34 1.8
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 34 1.8
UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1... 33 4.1
UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2; Ostreoco... 33 4.1
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 4.1
UniRef50_Q9NQ11 Cluster: Probable cation-transporting ATPase 13A... 33 4.1
UniRef50_A7JM26 Cluster: Predicted protein; n=1; Francisella tul... 32 7.1
UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma g... 32 7.1
UniRef50_Q4UAL7 Cluster: Putative uncharacterized protein; n=1; ... 32 9.4
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 164 bits (399), Expect = 1e-39
Identities = 81/100 (81%), Positives = 85/100 (85%)
Frame = +2
Query: 212 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 391
K + E L IKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 392 NGHIGLGVKCSKEVATAIRGAIILAKLSILPVRRXYWGNR 511
NGH+GLGVKCSKEVATAIRGAIILAKLSI+PVRR YWGN+
Sbjct: 134 NGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNK 173
Score = 57.6 bits (133), Expect = 2e-07
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +3
Query: 153 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPSKNS 266
K + KEW+PVTKLGRLV++ KI LE IYLFSLP K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 151 bits (367), Expect = 7e-36
Identities = 76/100 (76%), Positives = 80/100 (80%)
Frame = +2
Query: 212 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 391
K + E L IKE EIIDFFLG SL DEVLKIMPVQKQT AGQ TRFKAFV IGD
Sbjct: 14 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDY 73
Query: 392 NGHIGLGVKCSKEVATAIRGAIILAKLSILPVRRXYWGNR 511
NGH+GL VKCSKEVATAIRGAIILAKLSI+PV R YWGN+
Sbjct: 74 NGHVGLSVKCSKEVATAIRGAIILAKLSIVPVCRGYWGNK 113
Score = 43.6 bits (98), Expect = 0.003
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +3
Query: 174 VPVTKLGRLVREGKIDKLESIYLFSLPSKNS 266
+PVTKLG L+ + KI LE IYLFSLP K S
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKES 31
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 148 bits (358), Expect = 9e-35
Identities = 67/98 (68%), Positives = 83/98 (84%)
Frame = +2
Query: 212 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 391
K + E L IKE++I+D+FL P LNDEV+K++PVQKQTRAGQRTRFKAFV IGD+
Sbjct: 48 KIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDS 106
Query: 392 NGHIGLGVKCSKEVATAIRGAIILAKLSILPVRRXYWG 505
+GH+GLG+KC+KEVATAIRGAII+ KLSI+P+RR YWG
Sbjct: 107 DGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWG 144
Score = 58.4 bits (135), Expect = 9e-08
Identities = 24/36 (66%), Positives = 31/36 (86%)
Frame = +3
Query: 153 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPSK 260
++++KEWVPVTKLGRLV+ GKI +E IYL+SLP K
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIK 63
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 132 bits (319), Expect = 5e-30
Identities = 64/101 (63%), Positives = 80/101 (79%), Gaps = 2/101 (1%)
Frame = +2
Query: 230 EHLLVF-FTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 406
EH+ +F IKE +I++ F+G L DEV+KI PVQKQT AGQR RFKAFV +GD NGHIG
Sbjct: 69 EHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIG 128
Query: 407 LGVKCSKEVATAIRGAIILAKLSILPVRRXYWGNR-*ESHT 526
LGVK KEVA +I+G++ILAKL+I+PVRR YWG++ E HT
Sbjct: 129 LGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKLGEPHT 169
Score = 52.4 bits (120), Expect = 6e-06
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = +3
Query: 156 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPSK 260
+D+ WVP TKLGRLV++GKI LE I+LFSLP K
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIK 79
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 128 bits (308), Expect = 1e-28
Identities = 58/84 (69%), Positives = 70/84 (83%)
Frame = +2
Query: 254 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 433
+KEF+IID L P L DEV+ I PVQKQTRAGQRTRFKA V +GD+NGH+GLG+K +KEV
Sbjct: 63 VKEFQIIDTLL-PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEV 121
Query: 434 ATAIRGAIILAKLSILPVRRXYWG 505
A AIR II+AKLS++P+RR YWG
Sbjct: 122 AGAIRAGIIIAKLSVIPIRRGYWG 145
Score = 50.4 bits (115), Expect = 3e-05
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +3
Query: 159 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPSK 260
++K WVPVTKLGRLV+ GKI +E I+L SLP K
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVK 64
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 126 bits (303), Expect = 4e-28
Identities = 60/70 (85%), Positives = 64/70 (91%)
Frame = +2
Query: 302 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSIL 481
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLSI+
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 482 PVRRXYWGNR 511
P+R+ YWGN+
Sbjct: 108 PLRQGYWGNK 117
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 104 bits (250), Expect = 1e-21
Identities = 52/92 (56%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
Frame = +2
Query: 254 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 433
I+E EI+D G S+ +EVL I VQKQTRAGQ+TR KA V +GD GH+G+G K SKE
Sbjct: 49 IREPEIVDLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEA 108
Query: 434 ATAIRGAIILAKLSILPVRRXYW-GNR*ESHT 526
A+AIRGAI AK +I PVR W G + + HT
Sbjct: 109 ASAIRGAIARAKCAIRPVRLGLWDGAQGKPHT 140
Score = 37.5 bits (83), Expect = 0.19
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +3
Query: 153 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFS 248
++++ EW+P T +GRLV+ KI LE I+ FS
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFS 46
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 100 bits (239), Expect = 2e-20
Identities = 50/66 (75%), Positives = 52/66 (78%)
Frame = +2
Query: 212 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 391
K + E L IKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 49 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 108
Query: 392 NGHIGL 409
NGH+GL
Sbjct: 109 NGHVGL 114
Score = 58.4 bits (135), Expect = 9e-08
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +3
Query: 153 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPSKNS 266
K + KEW+PVTKLGRLV++ KI LE IYLFSLP K S
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 66
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 92.3 bits (219), Expect = 6e-18
Identities = 42/52 (80%), Positives = 46/52 (88%)
Frame = +2
Query: 353 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSILPVRRXYWGN 508
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLSILPV R YWGN
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGN 112
Score = 33.5 bits (73), Expect = 3.1
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 159 DQKEWVPVTKLGRLVREGKI 218
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 88.6 bits (210), Expect = 8e-17
Identities = 45/65 (69%), Positives = 49/65 (75%)
Frame = +2
Query: 212 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 391
K + E L IKE EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 392 NGHIG 406
NG+ G
Sbjct: 62 NGYAG 66
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 83.8 bits (198), Expect = 2e-15
Identities = 42/87 (48%), Positives = 61/87 (70%)
Frame = -1
Query: 508 VTPVTSSDW*N*QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFL 329
VTPV S+ N QL +D+S ++G G FLAAL QT++ V V +G++ LE L+GT L L
Sbjct: 30 VTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGLEARTLTGTGLLL 89
Query: 328 YRHDLKNLIIQGRAEEEINDLEFFDGK 248
HDL++ ++Q A+EEI+DLE F+G+
Sbjct: 90 DGHDLQHFVLQRAAQEEIDDLELFNGQ 116
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 78.6 bits (185), Expect = 8e-14
Identities = 39/65 (60%), Positives = 51/65 (78%)
Frame = +2
Query: 254 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 433
IKE++I+D FL +L +E L I PVQKQT AGQ+TRFKA+V +GD++ HIGLG K +KEV
Sbjct: 92 IKEYQIVDHFL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKEV 150
Query: 434 ATAIR 448
AI+
Sbjct: 151 QGAIQ 155
Score = 50.4 bits (115), Expect = 3e-05
Identities = 21/33 (63%), Positives = 28/33 (84%)
Frame = +3
Query: 162 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPSK 260
++EWVP+TKLGRLV+ GKI LE+I+ FS+P K
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIK 93
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 77.0 bits (181), Expect = 3e-13
Identities = 40/84 (47%), Positives = 59/84 (70%)
Frame = -1
Query: 505 TPVTSSDW*N*QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLY 326
TPVTSSDW N QL D++ S+G+ +FL+ L+TQT++TV V N + LE+ +L+ + L L
Sbjct: 112 TPVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLESGSLTSSGLLLD 171
Query: 325 RHDLKNLIIQGRAEEEINDLEFFD 254
R D+ N I+Q ++ +NDLEF D
Sbjct: 172 RLDVHNFILQ-VWQQLVNDLEFLD 194
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 74.9 bits (176), Expect = 1e-12
Identities = 48/94 (51%), Positives = 57/94 (60%)
Frame = +2
Query: 230 EHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 409
E L IKE EIID FLG +L DEVLK +P QK TR GQ +KA GD NGH+
Sbjct: 68 EIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ--YYKA----GDYNGHVIT 121
Query: 410 GVKCSKEVATAIRGAIILAKLSILPVRRXYWGNR 511
G+ EVA I+ IIL KL I+PV R Y G++
Sbjct: 122 GL---DEVANTIQRVIILTKLPIVPVWRGYCGSK 152
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 74.1 bits (174), Expect = 2e-12
Identities = 38/52 (73%), Positives = 39/52 (75%)
Frame = +2
Query: 212 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 367
K + E L IKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFK
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
Score = 58.4 bits (135), Expect = 9e-08
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +3
Query: 153 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPSKNS 266
K + KEW+PVTKLGRLV++ KI LE IYLFSLP K S
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 74.1 bits (174), Expect = 2e-12
Identities = 37/88 (42%), Positives = 57/88 (64%)
Frame = +2
Query: 230 EHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 409
E L I+E EI+D L P L+D+VL + +Q+ T +G+R RF +G+++G++GL
Sbjct: 12 EALATGLPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGL 70
Query: 410 GVKCSKEVATAIRGAIILAKLSILPVRR 493
+ KEVA+ IR AI AKL+++PV R
Sbjct: 71 AICKGKEVASTIRKAIDKAKLNMIPVMR 98
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 73.7 bits (173), Expect = 2e-12
Identities = 40/98 (40%), Positives = 54/98 (55%)
Frame = +2
Query: 152 QGRPERVGSCHQTRPSCSRRKNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQ 331
QG + P K + + +L IKEFE+ DF LG L D+VLK+M VQ
Sbjct: 116 QGLAPELSKAASESPQVKDMKMKSLKVYLFSL-PIKEFEVTDFLLGVPLKDKVLKLMFVQ 174
Query: 332 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 445
KQ +AG+R RFK V I D N ++ LGV+ KE+ A+
Sbjct: 175 KQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKELLIAV 212
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 71.7 bits (168), Expect = 9e-12
Identities = 36/77 (46%), Positives = 54/77 (70%)
Frame = +2
Query: 260 EFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVAT 439
E EI+D L P L ++VL + VQ+ ++G+R R++A V +G+ NG++G+G+ SKEV
Sbjct: 46 EPEIVDALL-PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGP 104
Query: 440 AIRGAIILAKLSILPVR 490
AIR AI AKLS++ VR
Sbjct: 105 AIRKAIAHAKLSLIKVR 121
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 69.3 bits (162), Expect = 5e-11
Identities = 44/89 (49%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Frame = +2
Query: 245 FFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCS 424
+ +KEFEI DFFL SL D+VLKI+P+ + R Q TRF +F I + GH G+GVKCS
Sbjct: 17 YLPVKEFEINDFFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHNGIGVKCS 74
Query: 425 KEVATAIRGAIILAKL-SILPVRRXYWGN 508
K+V TA+ + + L S LP R Y GN
Sbjct: 75 KKVGTAVGLSSWSSFLSSCLP--RDYCGN 101
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 68.1 bits (159), Expect = 1e-10
Identities = 31/80 (38%), Positives = 53/80 (66%)
Frame = +2
Query: 254 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 433
+KE++I+D+ + P L DEV+ I Q+ T +G+R + +G+ NG++G+G +KE
Sbjct: 33 LKEYQIVDYLI-PDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKEA 91
Query: 434 ATAIRGAIILAKLSILPVRR 493
A AI+ AI AKL+I+ ++R
Sbjct: 92 APAIKKAIDNAKLNIIEIKR 111
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 67.7 bits (158), Expect = 2e-10
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Frame = +2
Query: 248 FTIKEFEIIDFFLGPSLN----DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV 415
+ IKE EIID L P +N EVL I + T +G+R RF+ A+G+ +G++GLG+
Sbjct: 42 YQIKEPEIIDVLL-PEVNARENQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGI 100
Query: 416 KCSKEVATAIRGAIILAKLSILPVRR 493
KEV AIR AI AKL+I+ ++R
Sbjct: 101 GHGKEVGIAIRKAINYAKLNIIEIKR 126
Score = 31.9 bits (69), Expect = 9.4
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 168 EWVPVTKLGRLVREGKIDKLESIY 239
EW P TKLG +V+EG+I + I+
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIF 38
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 66.9 bits (156), Expect = 3e-10
Identities = 36/80 (45%), Positives = 54/80 (67%)
Frame = +2
Query: 254 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 433
I E EI+D L P L EV+ I VQKQT AG+ +R+K V +G+ +G++ +G +K++
Sbjct: 41 ITEPEIVDVLL-PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQL 99
Query: 434 ATAIRGAIILAKLSILPVRR 493
AI+ AI AK++I+PVRR
Sbjct: 100 RVAIQKAIRDAKMNIIPVRR 119
Score = 33.9 bits (74), Expect = 2.3
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 165 KEWVPVTKLGRLVREGKIDKLESIYLFSLP 254
+EW P T +G LV+EGKI ++ ++ +LP
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLP 40
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 66.1 bits (154), Expect = 5e-10
Identities = 29/79 (36%), Positives = 51/79 (64%)
Frame = +2
Query: 266 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 445
++++ G SL +V++ + V + T++G++ + K V +GD +GH+GLGVK S + I
Sbjct: 98 KLVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKSSMDSKAGI 157
Query: 446 RGAIILAKLSILPVRRXYW 502
+ A+ AKL+I +RR YW
Sbjct: 158 KAALRKAKLAITKIRRGYW 176
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 65.7 bits (153), Expect = 6e-10
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +2
Query: 329 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 472
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQL 48
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 65.7 bits (153), Expect = 6e-10
Identities = 35/80 (43%), Positives = 52/80 (65%)
Frame = +2
Query: 254 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 433
+KE EI+D L P L DEVL I VQ+ T +G+R +F+ VA+G+ +G++G +V
Sbjct: 86 LKEAEIVDQLL-PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGYAQARDDQV 144
Query: 434 ATAIRGAIILAKLSILPVRR 493
AI+ AI +AKL+I+ V R
Sbjct: 145 GGAIQKAIDVAKLNIIEVDR 164
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 64.1 bits (149), Expect = 2e-09
Identities = 34/52 (65%), Positives = 36/52 (69%)
Frame = +2
Query: 212 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 367
K + E L IK EIIDFFLG SL +EVLK MPVQKQTRAGQ TRFK
Sbjct: 74 KIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
Score = 54.4 bits (125), Expect = 2e-06
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = +3
Query: 153 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPSKNS 266
K + KEW+P TKLG LV++ KI LE IYLFSLP K S
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGS 91
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 63.3 bits (147), Expect = 3e-09
Identities = 34/80 (42%), Positives = 51/80 (63%)
Frame = +2
Query: 254 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 433
+KE E++D + P L DEVL I VQ+ T +G+R +F+ VA+G+ +G IG +V
Sbjct: 35 LKESEVVDQLV-PDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGYAEGRDDQV 93
Query: 434 ATAIRGAIILAKLSILPVRR 493
AI+ AI +AKL+I+ V R
Sbjct: 94 GGAIQKAIDIAKLNIIDVSR 113
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 62.5 bits (145), Expect = 6e-09
Identities = 34/70 (48%), Positives = 44/70 (62%)
Frame = +2
Query: 254 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 433
IKEFE+ DF L L D+VLK+M V+KQ AG+ RFK V I N ++ LGV+ KE+
Sbjct: 15 IKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVERPKEL 74
Query: 434 ATAIRGAIIL 463
A+ IIL
Sbjct: 75 LIAVCRTIIL 84
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 60.9 bits (141), Expect = 2e-08
Identities = 34/79 (43%), Positives = 48/79 (60%)
Frame = +2
Query: 254 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 433
I+E II L P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G SK++
Sbjct: 74 IQEAGIIKKLL-PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIGQGKSKQM 132
Query: 434 ATAIRGAIILAKLSILPVR 490
AI A A L++ P++
Sbjct: 133 RIAIEKATNAAYLNVNPIK 151
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 60.5 bits (140), Expect = 2e-08
Identities = 36/79 (45%), Positives = 48/79 (60%)
Frame = +2
Query: 275 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 454
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 455 IILAKLSILPVRRXYWGNR 511
IIL + SI + GN+
Sbjct: 55 IILDRSSIAIAWGGWSGNK 73
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 59.3 bits (137), Expect = 5e-08
Identities = 44/93 (47%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Frame = +2
Query: 254 IKEFEIIDFFLGPSLNDEVLKIM---PVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCS 424
IK E I FF S N L P+ KQT Q+TRFKA V +G + GH+ LG+K S
Sbjct: 69 IKSLEEIYFFSLLSRNLRSLTFSWEHPLIKQTCTDQQTRFKASVTVG-SYGHVSLGIKYS 127
Query: 425 KEVATAIRGAIILAKLSILPVRRXYWGNR*ESH 523
EVA IILAKLSI+PV G R E H
Sbjct: 128 MEVA------IILAKLSIIPVETATGGKRLEPH 154
Score = 52.0 bits (119), Expect = 8e-06
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = +3
Query: 162 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPSKNSRSLISSSARP 296
+ +W+P+TKLG LV+E KI LE IY FSL S+N RSL S P
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHP 95
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 57.6 bits (133), Expect = 2e-07
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +2
Query: 254 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 433
I+E II L P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G +K++
Sbjct: 55 IQESGIIKKLL-PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQM 113
Query: 434 ATAIRGAIILAKLSILPVR 490
AI A A L++ P++
Sbjct: 114 RIAIEKANNQALLNVGPIK 132
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 56.4 bits (130), Expect = 4e-07
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +2
Query: 287 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 466
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 467 KLSIL--PVRRXY 499
K + + P+ + Y
Sbjct: 128 KKTAITVPITKDY 140
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 56.0 bits (129), Expect = 5e-07
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +3
Query: 153 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPSK 260
K + KEW+PVTKLGRLV++ KI LE IYLFSLP K
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 54.4 bits (125), Expect = 2e-06
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = +2
Query: 257 KEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 436
K+ II FFL SL DE IMPVQ QT R FK FV+I D + H+ L KCSK+ A
Sbjct: 88 KKSMIIGFFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKTA 143
Query: 437 TAI 445
TAI
Sbjct: 144 TAI 146
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 54.4 bits (125), Expect = 2e-06
Identities = 28/52 (53%), Positives = 35/52 (67%)
Frame = +2
Query: 254 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 409
IKE++I+D L L +EV+ I VQKQT G+ R KA VAIGD+NGH L
Sbjct: 62 IKEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
Score = 35.9 bits (79), Expect = 0.58
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 177 PVTKLGRLVREGKIDKLESIYLFSLPSK 260
PVTKLGRLV++GK+ ++ I+ F + K
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIK 63
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 53.2 bits (122), Expect = 4e-06
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +2
Query: 296 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 475
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 476 ILPV 487
++ V
Sbjct: 72 LISV 75
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 52.4 bits (120), Expect = 6e-06
Identities = 27/72 (37%), Positives = 42/72 (58%)
Frame = +2
Query: 293 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 472
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 473 SILPVRRXYWGN 508
+++ V++ G+
Sbjct: 108 NLIKVKQTKKGS 119
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 50.8 bits (116), Expect = 2e-05
Identities = 23/71 (32%), Positives = 43/71 (60%)
Frame = +2
Query: 275 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 454
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 455 IILAKLSILPV 487
++ AK S++ V
Sbjct: 566 LVDAKKSVVRV 576
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 50.8 bits (116), Expect = 2e-05
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = +2
Query: 290 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 469
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 470 LSILPV 487
++ +
Sbjct: 73 KQLVRI 78
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 49.2 bits (112), Expect = 6e-05
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 13/95 (13%)
Frame = +2
Query: 248 FTIKEFEIIDFFLGPSLNDEVLKIMPV-------------QKQTRAGQRTRFKAFVAIGD 388
+ I+E EI+D L P+L E +K + QK+T G +TR++ +GD
Sbjct: 33 YVIREPEIVDVLL-PNLEVEFMKWRIIRGKFRSKKPYRMAQKKTAEGNKTRYEVIAIVGD 91
Query: 389 NNGHIGLGVKCSKEVATAIRGAIILAKLSILPVRR 493
+GH+G+G+ S ++ A AI AKL+I+ V R
Sbjct: 92 KDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVAR 126
Score = 37.1 bits (82), Expect = 0.25
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +3
Query: 165 KEWVPVTKLGRLVREGKIDKLESI 236
+EW P TKLGRLV+EGKI ++ I
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEI 28
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 49.2 bits (112), Expect = 6e-05
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +2
Query: 296 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 475
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 476 ILPVR 490
+ V+
Sbjct: 138 MYKVK 142
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 49.2 bits (112), Expect = 6e-05
Identities = 25/62 (40%), Positives = 36/62 (58%)
Frame = +2
Query: 302 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSIL 481
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +I+
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 482 PV 487
+
Sbjct: 71 KI 72
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 48.8 bits (111), Expect = 8e-05
Identities = 34/82 (41%), Positives = 43/82 (52%)
Frame = +2
Query: 266 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 445
+II+FFLG L DEVL+ M Q QRTR K F + + L V CSKEV TA
Sbjct: 51 DIIEFFLGEHLKDEVLRTMLAQ-----NQRTRIKVFFFLTIRSPMTTL-VNCSKEVGTAA 104
Query: 446 RGAIILAKLSILPVRRXYWGNR 511
+ AI L + + Y GN+
Sbjct: 105 QRAITLLSF-LFSTQTGYKGNK 125
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 48.8 bits (111), Expect = 8e-05
Identities = 22/62 (35%), Positives = 38/62 (61%)
Frame = +2
Query: 302 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSIL 481
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK +I+
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 482 PV 487
V
Sbjct: 77 EV 78
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 48.4 bits (110), Expect = 1e-04
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +2
Query: 281 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 460
F ++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 461 LAKLSILPV 487
AK +++ V
Sbjct: 98 EAKKNLIRV 106
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 47.6 bits (108), Expect = 2e-04
Identities = 20/62 (32%), Positives = 40/62 (64%)
Frame = +2
Query: 302 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSIL 481
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +I+
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 482 PV 487
V
Sbjct: 209 QV 210
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 47.2 bits (107), Expect = 2e-04
Identities = 22/62 (35%), Positives = 38/62 (61%)
Frame = +2
Query: 302 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSIL 481
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 482 PV 487
V
Sbjct: 79 TV 80
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 46.0 bits (104), Expect = 5e-04
Identities = 20/62 (32%), Positives = 38/62 (61%)
Frame = +2
Query: 302 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSIL 481
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +I+
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 482 PV 487
V
Sbjct: 246 TV 247
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 46.0 bits (104), Expect = 5e-04
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +2
Query: 302 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 454
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 45.2 bits (102), Expect = 0.001
Identities = 26/69 (37%), Positives = 35/69 (50%)
Frame = +2
Query: 287 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 466
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 467 KLSILPVRR 493
K + V R
Sbjct: 102 KKHMFSVPR 110
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 44.0 bits (99), Expect = 0.002
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +2
Query: 299 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSI 478
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 479 LPV 487
+ +
Sbjct: 91 VKI 93
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 44.0 bits (99), Expect = 0.002
Identities = 18/62 (29%), Positives = 38/62 (61%)
Frame = +2
Query: 302 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSIL 481
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 482 PV 487
V
Sbjct: 128 RV 129
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 43.6 bits (98), Expect = 0.003
Identities = 23/67 (34%), Positives = 36/67 (53%)
Frame = +2
Query: 287 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 466
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 467 KLSILPV 487
K +++ V
Sbjct: 116 KKTMIRV 122
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 43.2 bits (97), Expect = 0.004
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +2
Query: 302 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 475
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 476 ILPVR 490
+P+R
Sbjct: 84 FVPLR 88
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 43.2 bits (97), Expect = 0.004
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +2
Query: 302 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSIL 481
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 482 PV 487
V
Sbjct: 104 RV 105
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 42.7 bits (96), Expect = 0.005
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = +2
Query: 296 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 475
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 476 ILPV 487
++ V
Sbjct: 88 VIRV 91
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 41.5 bits (93), Expect = 0.012
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +2
Query: 302 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSIL 481
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 482 PV 487
V
Sbjct: 79 EV 80
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 41.1 bits (92), Expect = 0.015
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +2
Query: 296 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 469
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERAR 73
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 40.3 bits (90), Expect = 0.027
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +3
Query: 171 WVPVTKLGRLVREGKIDKLESIYLFSLPSK 260
W PVTKLGRLV++GK+ ++ I+ F + K
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIK 64
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 37.5 bits (83), Expect = 0.19
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2
Query: 326 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSILPVRR 493
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR 405
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 37.5 bits (83), Expect = 0.19
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 296 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 448
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 37.5 bits (83), Expect = 0.19
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +2
Query: 296 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 475
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 476 ILPVRR 493
++P+RR
Sbjct: 310 MVPIRR 315
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 37.5 bits (83), Expect = 0.19
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +2
Query: 296 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 475
L ++VL + K + G++ F A + +GD G +G G + E+ AIR A+ +
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIRKGGEAARKN 72
Query: 476 ILPV 487
++ +
Sbjct: 73 LITI 76
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.25
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -1
Query: 457 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 359
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 37.1 bits (82), Expect = 0.25
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +2
Query: 302 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSIL 481
++++ I V + G+R F A V +GD G +G G + EV AI+ A+ A+ +++
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLI 150
Query: 482 PV 487
V
Sbjct: 151 RV 152
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 36.7 bits (81), Expect = 0.33
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +2
Query: 296 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 475
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 476 ILPV 487
++ V
Sbjct: 81 MVRV 84
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 36.3 bits (80), Expect = 0.44
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +2
Query: 299 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSI 478
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR A+ ++
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIRKGGEAARRNL 75
Query: 479 LPV 487
+ V
Sbjct: 76 VTV 78
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 35.9 bits (79), Expect = 0.58
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +2
Query: 308 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSILPV 487
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 35.5 bits (78), Expect = 0.76
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +2
Query: 326 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSILPVRR 493
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR 378
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 35.1 bits (77), Expect = 1.0
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +2
Query: 293 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 472
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 473 SILPVRR 493
++ P+RR
Sbjct: 302 NMRPIRR 308
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 34.7 bits (76), Expect = 1.3
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = -1
Query: 253 GKENK*MLSSLSIFPSRTRRPSLVTGTHSF 164
GKE K + S + I P+ T PSLVTGTH F
Sbjct: 22 GKECKKISSMVVILPALTNLPSLVTGTHPF 51
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 1.3
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 281 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 445
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 34.3 bits (75), Expect = 1.8
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +2
Query: 284 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 463
L ++ +++++I + + G+ R+K + +G+ G IGLGV SK + I AII
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGV--SKNI--NINKAIIS 149
Query: 464 AKLSIL 481
AK+ L
Sbjct: 150 AKIKAL 155
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 34.3 bits (75), Expect = 1.8
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +2
Query: 293 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 472
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 473 SILPVRR 493
++ PV R
Sbjct: 314 NMQPVPR 320
>UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1;
Acidobacteria bacterium Ellin345|Rep: Molybdenum
cofactor synthesis-like - Acidobacteria bacterium
(strain Ellin345)
Length = 338
Score = 33.1 bits (72), Expect = 4.1
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Frame = -1
Query: 343 TCLFLYR-HDLKNLIIQGRAEEEIND-LEF-FDGKENK*MLSSLSIFP-SRT 200
TCLF R HDL +LI++G ++EEI D + + + KE + + P SRT
Sbjct: 281 TCLFSVREHDLASLILEGASDEEIADRIRYAVENKEQRHHIGEADFMPASRT 332
>UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2;
Ostreococcus|Rep: COG0457: FOG: TPR repeat - Ostreococcus
tauri
Length = 1474
Score = 33.1 bits (72), Expect = 4.1
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 4/37 (10%)
Frame = -1
Query: 367 LETCALSGTCLFLYRHDLKNLI----IQGRAEEEIND 269
LE+CAL TC+ +Y HD+ ++ + +A+E+++D
Sbjct: 965 LESCALDDTCVIVYEHDMNRVMLCRTLVSKAKEKLSD 1001
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 4.1
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 308 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 454
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
>UniRef50_Q9NQ11 Cluster: Probable cation-transporting ATPase 13A2;
n=23; Euteleostomi|Rep: Probable cation-transporting
ATPase 13A2 - Homo sapiens (Human)
Length = 1180
Score = 33.1 bits (72), Expect = 4.1
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -2
Query: 228 RVCRFFLREQDGRVW*QEPTLSGLPCRAHDHGRDXDRVHEDRHGLYL 88
RV R++L + +W E + DHGR D VH RHGL L
Sbjct: 161 RVLRYYLFQGQRYIW-IETQQAFYQVSLLDHGRSCDDVHRSRHGLSL 206
>UniRef50_A7JM26 Cluster: Predicted protein; n=1; Francisella
tularensis subsp. novicida GA99-3548|Rep: Predicted
protein - Francisella tularensis subsp. novicida
GA99-3548
Length = 377
Score = 32.3 bits (70), Expect = 7.1
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +3
Query: 183 TKLGRLVREGKIDKLESIYLFSLPSKNSRSLISSSA 290
TK+GRL I+ ++ +YLF P N+R+L SSA
Sbjct: 125 TKIGRLQSFQNINSMQGVYLFEAPI-NTRALFQSSA 159
>UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma
gondii|Rep: Ribosomal protein S5 - Toxoplasma gondii
Length = 268
Score = 32.3 bits (70), Expect = 7.1
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 305 EVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 466
++++I + K + G+ RFK + IG N IG+GV + AI A A
Sbjct: 134 KIIEIKKISKTKQKGRIRRFKVLLLIGAKNAWIGIGVSKDFYLQEAINKARFFA 187
>UniRef50_Q4UAL7 Cluster: Putative uncharacterized protein; n=1;
Theileria annulata|Rep: Putative uncharacterized protein
- Theileria annulata
Length = 700
Score = 31.9 bits (69), Expect = 9.4
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +2
Query: 293 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 457
+L +L ++ T+ G+ + AIGD NG+ G+G+ +V +A I
Sbjct: 471 NLKSFILSKKRMRSMTKEGRVYFIRVITAIGDGNGYFGIGIGYGNDVNSAKNAGI 525
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,920,575
Number of Sequences: 1657284
Number of extensions: 9368507
Number of successful extensions: 27094
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 26074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27058
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33455602480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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