Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0364
(839 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 169 6e-43
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 168 7e-43
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 168 7e-43
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 99 7e-22
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 95 8e-21
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 75 1e-14
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 37 0.003
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 36 0.009
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 36 0.009
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 34 0.022
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 33 0.038
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 32 0.12
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 31 0.27
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 31 0.27
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.62
SPAC1093.02 |||pyridoxamine 5'-phosphate oxidase |Schizosaccharo... 29 0.62
SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharo... 28 1.4
SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|c... 27 4.4
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 4.4
SPAC4D7.09 |tif223||translation initiation factor eIF2B|Schizosa... 26 5.8
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 169 bits (410), Expect = 6e-43
Identities = 86/142 (60%), Positives = 100/142 (70%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 434
TIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI+ GTGEFEAGISK+G
Sbjct: 72 TIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKDG 131
Query: 435 QTREHALLAFTLGVKQLIVGVNKMDPLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSLSC 614
QTREHALLA+TLGVKQLIV VNKMD + ++ + +++
Sbjct: 132 QTREHALLAYTLGVKQLIVAVNKMDTTGWSQAR--FEEIVKETSNFIKKVGFNPKTVPFV 189
Query: 615 PFSGWHGDNMLGASTKNALVQG 680
P SG+ GDNM+ +T QG
Sbjct: 190 PVSGFQGDNMIEPTTNMPWYQG 211
Score = 139 bits (336), Expect = 5e-34
Identities = 63/67 (94%), Positives = 65/67 (97%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 223 DKLKAER 243
DKLKAER
Sbjct: 61 DKLKAER 67
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 168 bits (409), Expect = 7e-43
Identities = 85/142 (59%), Positives = 100/142 (70%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 434
TIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+G
Sbjct: 72 TIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDG 131
Query: 435 QTREHALLAFTLGVKQLIVGVNKMDPLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSLSC 614
QTREHALLA+TLGVKQLIV VNKMD + ++ + +++
Sbjct: 132 QTREHALLAYTLGVKQLIVAVNKMDTTGWSQAR--FEEIVKETSNFIKKVGFNPKTVPFV 189
Query: 615 PFSGWHGDNMLGASTKNALVQG 680
P SG+ GDNM+ +T QG
Sbjct: 190 PVSGFQGDNMIEPTTNMPWYQG 211
Score = 139 bits (336), Expect = 5e-34
Identities = 63/67 (94%), Positives = 65/67 (97%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 223 DKLKAER 243
DKLKAER
Sbjct: 61 DKLKAER 67
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 168 bits (409), Expect = 7e-43
Identities = 85/142 (59%), Positives = 100/142 (70%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 434
TIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+G
Sbjct: 72 TIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDG 131
Query: 435 QTREHALLAFTLGVKQLIVGVNKMDPLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSLSC 614
QTREHALLA+TLGVKQLIV VNKMD + ++ + +++
Sbjct: 132 QTREHALLAYTLGVKQLIVAVNKMDTTGWSQAR--FEEIVKETSNFIKKVGFNPKTVPFV 189
Query: 615 PFSGWHGDNMLGASTKNALVQG 680
P SG+ GDNM+ +T QG
Sbjct: 190 PVSGFQGDNMIEPTTNMPWYQG 211
Score = 139 bits (336), Expect = 5e-34
Identities = 63/67 (94%), Positives = 65/67 (97%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 223 DKLKAER 243
DKLKAER
Sbjct: 61 DKLKAER 67
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 99.1 bits (236), Expect = 7e-22
Identities = 43/85 (50%), Positives = 60/85 (70%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 434
T+++ FET +++DAPGH+ ++ NMI G SQAD VL+++A GEFEAG + G
Sbjct: 303 TVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGG 362
Query: 435 QTREHALLAFTLGVKQLIVGVNKMD 509
QTREHA+LA T G+ L+V +NKMD
Sbjct: 363 QTREHAVLARTQGINHLVVVINKMD 387
Score = 78.6 bits (185), Expect = 1e-15
Identities = 34/63 (53%), Positives = 46/63 (73%)
Frame = +1
Query: 55 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 234
K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295
Query: 235 AER 243
ER
Sbjct: 296 EER 298
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 95.5 bits (227), Expect = 8e-21
Identities = 45/85 (52%), Positives = 56/85 (65%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 434
T+D+A FE+ K I DAPGHRDFI MI G S AD AVL+V + FE G +NG
Sbjct: 242 TMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLENG 301
Query: 435 QTREHALLAFTLGVKQLIVGVNKMD 509
QTREHA L LG+ +++V VNK+D
Sbjct: 302 QTREHAYLLRALGISEIVVSVNKLD 326
Score = 72.5 bits (170), Expect = 7e-14
Identities = 31/63 (49%), Positives = 44/63 (69%)
Frame = +1
Query: 55 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 234
K +++VV GHVDSGKST G ++++ G I+ R+++K EA GKGSF YAW+LD +
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTE 234
Query: 235 AER 243
ER
Sbjct: 235 EER 237
Score = 34.3 bits (75), Expect = 0.022
Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +2
Query: 524 YSEPRFEEIKKEVSSY-IKKIGYNPAAVAFVPI 619
+SE RF+EIK VS + IK +G+ + V FVPI
Sbjct: 330 WSEDRFQEIKNIVSDFLIKMVGFKTSNVHFVPI 362
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 74.9 bits (176), Expect = 1e-14
Identities = 38/85 (44%), Positives = 55/85 (64%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 434
TI A ++ET+ + +D PGH D+IKNMITG + D A+++V+A G+
Sbjct: 103 TISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQMP------- 155
Query: 435 QTREHALLAFTLGVKQLIVGVNKMD 509
QTREH LLA +GVKQ++V +NK+D
Sbjct: 156 QTREHLLLARQVGVKQIVVYINKVD 180
Score = 35.1 bits (77), Expect = 0.012
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +1
Query: 49 KEKTHINIVVIGHVDSGKSTTTGHLIYKC 135
++K H+NI IGHVD GK+T T I KC
Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC 76
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 37.1 bits (82), Expect = 0.003
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +3
Query: 297 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 476
+V+ +D PGH + M+ G + D A+L++A QT EH + +
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162
Query: 477 KQLIVGVNKMD 509
K +I+ NK+D
Sbjct: 163 KHIIILQNKVD 173
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 35.5 bits (78), Expect = 0.009
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 138
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
Score = 27.9 bits (59), Expect = 1.9
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 294 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 389
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 35.5 bits (78), Expect = 0.009
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 138
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
Score = 27.9 bits (59), Expect = 1.9
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 294 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 389
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 34.3 bits (75), Expect = 0.022
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +3
Query: 279 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 449
FE S Y + IID PGH DF + D AVL++ A +G I+ + Q R +
Sbjct: 141 FEKS-YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196
Score = 29.1 bits (62), Expect = 0.82
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGI 144
NI + H+DSGK+T T ++Y G I
Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI 86
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 33.5 bits (73), Expect = 0.038
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 279 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 404
F+ ++T +D PGH F G + AD VL+VA G
Sbjct: 215 FDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDG 256
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 31.9 bits (69), Expect = 0.12
Identities = 27/85 (31%), Positives = 39/85 (45%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 434
TI+ A F + +ID PGH DF + + D AV I+ + AG+
Sbjct: 80 TINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAII-----DGSAGV--EA 132
Query: 435 QTREHALLAFTLGVKQLIVGVNKMD 509
QT+ A G+ ++I VNKMD
Sbjct: 133 QTKVVWKQATKRGIPKVIF-VNKMD 156
Score = 28.7 bits (61), Expect = 1.1
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCG 138
N+ +I H+D+GK+T T ++Y G
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG 53
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 30.7 bits (66), Expect = 0.27
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +3
Query: 270 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 404
++ + Y + +ID PGH DF ++ + + +L+V A G
Sbjct: 116 IYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 30.7 bits (66), Expect = 0.27
Identities = 23/74 (31%), Positives = 37/74 (50%)
Frame = +3
Query: 294 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 473
Y + +ID+PGH DF + + + D A ++V A G I+ Q A+
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEGVCSQTITVLRQ-------AWIDR 146
Query: 474 VKQLIVGVNKMDPL 515
+K ++V +NKMD L
Sbjct: 147 IKVILV-INKMDRL 159
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.5 bits (63), Expect = 0.62
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 306 IIDAPGHRDFIKNMITGTSQADCAVLIV 389
IID PGH F GTS + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPAC1093.02 |||pyridoxamine 5'-phosphate oxidase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 231
Score = 29.5 bits (63), Expect = 0.62
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 491 RSKQNGSTEPPYSE--PRFEEIKKEVSSYIKKIGYNPAAVAFVPIFW 625
R+ + G+ P SE EE++K V Y KK G + + VP FW
Sbjct: 143 RNSRIGAWASPQSEVIADREELEKRVEEYKKKFGEDESVPVPVPDFW 189
>SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1811
Score = 28.3 bits (60), Expect = 1.4
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 531 SPDLRKSRRKYPHTSRRLATTQLLSLSCPFSGWHGDNMLGASTKNALVQ 677
S + KS++ + + T QLL L+C + +H DNML K +V+
Sbjct: 1601 SQSVFKSKKHHLKSIVVKCTLQLLMLNCLWELFHSDNMLTNIPKRKMVK 1649
>SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 367
Score = 26.6 bits (56), Expect = 4.4
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +3
Query: 525 TVSPDLRKSRRKYPHTSRRLATTQLLSLSCPFSGWHGDNMLGASTKNALVQGD 683
+ +PD+ ++PHT +R +T + L + C + + S N L GD
Sbjct: 145 STNPDVLYMSSQHPHTQQRYSTLKRLMVRCLSCEYSTLSEASDSMSNPLFFGD 197
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 309 IDAPGHRDFIKNMITGTSQADCAVLIV 389
ID PGH DF+ + + +D VL+V
Sbjct: 214 IDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPAC4D7.09 |tif223||translation initiation factor
eIF2B|Schizosaccharomyces pombe|chr 1|||Manual
Length = 468
Score = 26.2 bits (55), Expect = 5.8
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = -1
Query: 383 EHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNIDCIPXSRSAFSLSNTQAYL 204
EH+A+ L S +L IS R N GNI L S + + S + L+ + A
Sbjct: 5 EHAALPLASS-PSILGPISGGR--NRGNIQLQSIPIEFQAVVFAGFGNSLYPLTGSDALP 61
Query: 203 KDPLPI 186
K LPI
Sbjct: 62 KALLPI 67
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,383,556
Number of Sequences: 5004
Number of extensions: 70722
Number of successful extensions: 238
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 229
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 414453330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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