Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0362
         (608 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    23   2.0  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   8.1  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   8.1  
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    21   8.1  

>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -3

Query: 498 LLFLVNFKCT*M*SNSMYTVCYNLIDCNAVLKT 400
           LLF V    + +  NS YT  Y+ +D + ++K+
Sbjct: 7   LLFFVIAIASSLAENSKYTTKYDNVDLDEIIKS 39


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 171 KFTFQNINRKLKRNITLVSE 230
           K  FQN   KLK+ I  + E
Sbjct: 268 KIWFQNRRMKLKKEIQAIKE 287


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = +3

Query: 129 ELIDMLHFFHKHLQKFTFQNINRKLKRNITLVSEFYCIMLV 251
           EL +  +F  +HL KF+  N     +  I  V    C  L+
Sbjct: 305 ELYEFSNFVSQHLPKFSAANFFDIERSTILSVLGTACTFLI 345


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
           protein.
          Length = 96

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 171 KFTFQNINRKLKRNITLVSE 230
           K  FQN   KLK+ I  + E
Sbjct: 50  KIWFQNRRMKLKKEIQAIKE 69


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,118
Number of Sequences: 336
Number of extensions: 2229
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)