Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0361
         (826 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    23   2.2  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    23   2.2  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   5.1  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   9.0  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   9.0  

>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = -2

Query: 87  DQHYGGDHAQDYTQDWYLFRAFSFLLR 7
           D +YGG ++++   ++YL    ++ LR
Sbjct: 353 DFYYGGPNSENNLDNFYLIHTDTYFLR 379


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = -2

Query: 87  DQHYGGDHAQDYTQDWYLFRAFSFLLR 7
           D +YGG ++++   ++YL    ++ LR
Sbjct: 355 DFYYGGPNSENNLDNFYLIHTDTYFLR 381


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = -2

Query: 81  HYGGDHAQDYTQDWYLFRAFSFLLR 7
           +YGG ++++   ++YL    ++ LR
Sbjct: 355 YYGGPNSENNLDNFYLIHTDTYFLR 379


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -2

Query: 117 HLP*HQQRQPDQHYGGDHAQDY 52
           H+  H Q Q  QH+   H Q +
Sbjct: 166 HMGHHMQEQHPQHHQPHHQQQH 187


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -2

Query: 117 HLP*HQQRQPDQHYGGDHAQDY 52
           H+  H Q Q  QH+   H Q +
Sbjct: 168 HMGHHMQEQHPQHHQPHHQQQH 189


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,467
Number of Sequences: 336
Number of extensions: 3594
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22621642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)