Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0361
         (826 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0076 - 987092-987671,987747-987812,988201-988363,988467-98...    31   1.1  
08_02_0933 + 22740123-22740364,22741952-22742390,22743060-227431...    28   7.8  

>10_01_0076 -
           987092-987671,987747-987812,988201-988363,988467-988548,
           989153-989202,989237-989270,990177-990239,990339-990403,
           990485-990560,991274-991353,991514-991628,991729-991830
          Length = 491

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = +3

Query: 63  RDRRHSAGRAGAVDAMEDGHHHTRPTRVRTLRKGTYDGQMGYGRXSDLQASXVD 224
           R R  S  R    D+ ED HHH    R R   +G  D +  +GR  D +    D
Sbjct: 316 RTRERSHDRTRERDSKEDRHHHRDRDRTRDRERGR-DRERDHGRDRDRERDRRD 368


>08_02_0933 +
           22740123-22740364,22741952-22742390,22743060-22743172,
           22743470-22743575
          Length = 299

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -1

Query: 160 FRSVRTRVGRVWWWPSSIASTAPARPALW 74
           +R  R    R WWWPS+ ++  P R  LW
Sbjct: 172 WRLARREGIRGWWWPST-SAPIPLRMELW 199


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,945,340
Number of Sequences: 37544
Number of extensions: 365425
Number of successful extensions: 830
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 829
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)