Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0361
         (826 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...   112   1e-26
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    33   0.008
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   4.9  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    24   4.9  

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
            protein.
          Length = 837

 Score =  112 bits (270), Expect = 1e-26
 Identities = 52/84 (61%), Positives = 58/84 (69%)
 Frame = +1

Query: 1    IRAQKERECPKKVPXXXXXXXXXXXXXXXXXXXXMLWKMATTIHDRREFARFEKERMMAK 180
            + AQ+ RECP KV                     +LWK+ T+IHDRREFARFEKERMMAK
Sbjct: 754  VTAQENRECPPKVFMLGIVLAVIAVVVLIGMAVLLLWKVLTSIHDRREFARFEKERMMAK 813

Query: 181  WDTGXNPIYKQATSTFKNPTYAGK 252
            WDTG NPIYKQAT+TFKNPTYAGK
Sbjct: 814  WDTGENPIYKQATTTFKNPTYAGK 837


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 33.5 bits (73), Expect = 0.008
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = +1

Query: 133 DRREFARFEKERMMAKWDTGXNPIYKQATSTFKNP 237
           DR+ FA+FEKER         +P+YK   S FK P
Sbjct: 761 DRKMFAKFEKEREQETKYQMESPLYKSPISNFKVP 795


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 105 HQQRQPDQHYGGDHAQDYT 49
           HQ  Q  QH G  HAQ ++
Sbjct: 647 HQHHQAHQHQGQHHAQHHS 665


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -1

Query: 118 PSSIASTAPARPALWRRSRPGLYPRLVP 35
           P +   +   RP  W RSRP   P+ +P
Sbjct: 274 PPARRRSRSTRPTSWPRSRPTSKPKRLP 301


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 764,239
Number of Sequences: 2352
Number of extensions: 15279
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87734433
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)