Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0360
         (375 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   1.8  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   2.4  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   4.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   4.1  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   4.1  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   4.1  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    20   7.2  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    20   7.2  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    20   9.5  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 9/31 (29%), Positives = 12/31 (38%)
 Frame = +2

Query: 134 NSPECIQQKQPVSSKLVSIPATQTQYCSCHY 226
           N+PEC+   +     L         YC  HY
Sbjct: 548 NNPECLFDGRDCEESLQPCNPIYDAYCQKHY 578


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +2

Query: 110 KGEFINNMNSPECIQQKQPVSSKL 181
           + +  NN+NSP  + Q  P ++++
Sbjct: 417 QSDITNNVNSPASMNQTPPPTAQM 440


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +3

Query: 339 IVITKSKNLQF 371
           I++ KSKNLQF
Sbjct: 112 ILLNKSKNLQF 122


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = +2

Query: 182 VSIPATQTQYCSCHYCVKTV 241
           VS   T    C CH C  T+
Sbjct: 914 VSTLYTANVVCICHVCYSTI 933


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +3

Query: 339 IVITKSKNLQF 371
           I++ KSKNLQF
Sbjct: 112 ILLNKSKNLQF 122


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +3

Query: 339 IVITKSKNLQF 371
           I++ KSKNLQF
Sbjct: 112 ILLNKSKNLQF 122


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = +2

Query: 320 KPXNCTHCDHK 352
           +P  C HCD +
Sbjct: 36  RPYRCEHCDRQ 46


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = +2

Query: 320 KPXNCTHCDHK 352
           +P  C HCD +
Sbjct: 189 RPYRCEHCDRQ 199


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +1

Query: 250 TFLREXFHCY 279
           +F ++ FHCY
Sbjct: 417 SFFQQFFHCY 426


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,523
Number of Sequences: 336
Number of extensions: 1513
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7828090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)