Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0360
         (375 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0282 - 15274413-15274465,15274564-15275245                       28   2.1  
07_01_1145 - 10742757-10743085,10744784-10744865                       28   2.1  
01_06_1067 + 34258036-34258051,34264808-34265679                       28   2.1  
11_06_0056 + 19677556-19677610,19677764-19677984                       27   6.3  
04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585     27   6.3  

>08_02_0282 - 15274413-15274465,15274564-15275245
          Length = 244

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +2

Query: 110 KGEFINNMNSPECIQQKQPVSSKLVSIPATQTQYCSCHYC 229
           +GE  N  + PE  Q+++ + +   ++P + + Y  CH+C
Sbjct: 170 QGESSNKNSEPEGEQKQEGIKASTSAVPLSTSPY--CHFC 207


>07_01_1145 - 10742757-10743085,10744784-10744865
          Length = 136

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +2

Query: 110 KGEFINNMNSPECIQQKQPVSSKLVSIPATQTQYCSCHYC 229
           +GE  N  + PE  Q+++ + +   ++P + + Y  CH+C
Sbjct: 94  QGESSNKNSEPEGEQKQEGIKASTSAVPLSTSPY--CHFC 131


>01_06_1067 + 34258036-34258051,34264808-34265679
          Length = 295

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +2

Query: 110 KGEFINNMNSPECIQQKQPVSSKLVSIPATQTQYCSCHYC 229
           +GE  N  + PE  Q+++ + +   ++P + + Y  CH+C
Sbjct: 232 QGESSNKNSEPEGEQKQEGIKASTSAVPLSTSPY--CHFC 269


>11_06_0056 + 19677556-19677610,19677764-19677984
          Length = 91

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 164 PVSSKLVSIPATQTQYCSCHYCVKTVSN 247
           P+ S + SI    +  C C YC + + N
Sbjct: 64  PIPSMVASIVCHNSSECECMYCPRAIRN 91


>04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585
          Length = 268

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
 Frame = +2

Query: 287 QPK-KYCQCCLPKPXNCTHCDHKK--QKPPIC 373
           +PK K C C  PKP  C HC+  K  +KPP C
Sbjct: 115 KPKPKPCHCEKPKP--C-HCEKPKPCEKPPPC 143


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,101,407
Number of Sequences: 37544
Number of extensions: 136366
Number of successful extensions: 260
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 260
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 600754600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)