Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0360
(375 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U22680-1|AAA98503.1| 1088|Homo sapiens X2 box repressor protein. 29 4.9
U22314-1|AAB17211.1| 1097|Homo sapiens REST protein protein. 29 4.9
U13879-1|AAC50115.1| 681|Homo sapiens neuron-restrictive silenc... 29 4.9
BC132859-1|AAI32860.1| 1097|Homo sapiens RE1-silencing transcrip... 29 4.9
BC038985-1|AAH38985.1| 454|Homo sapiens Similar to RE1-silencin... 29 4.9
BC017822-1|AAH17822.1| 460|Homo sapiens Unknown (protein for IM... 29 4.9
AB209750-1|BAD92987.1| 1126|Homo sapiens RE1-silencing transcrip... 29 4.9
L20321-1|AAA36658.1| 841|Homo sapiens protein serine/threonine ... 28 8.6
EF560744-1|ABQ59054.1| 841|Homo sapiens NEK4 protein protein. 28 8.6
BC063044-1|AAH63044.1| 781|Homo sapiens NEK4 protein protein. 28 8.6
BC015515-1|AAH15515.1| 451|Homo sapiens Unknown (protein for IM... 28 8.6
>U22680-1|AAA98503.1| 1088|Homo sapiens X2 box repressor protein.
Length = 1088
Score = 29.1 bits (62), Expect = 4.9
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2
Query: 317 PKPXNCTHCDHK 352
PKP NC HCD+K
Sbjct: 357 PKPLNCPHCDYK 368
>U22314-1|AAB17211.1| 1097|Homo sapiens REST protein protein.
Length = 1097
Score = 29.1 bits (62), Expect = 4.9
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2
Query: 317 PKPXNCTHCDHK 352
PKP NC HCD+K
Sbjct: 358 PKPLNCPHCDYK 369
>U13879-1|AAC50115.1| 681|Homo sapiens neuron-restrictive silencer
factor protein.
Length = 681
Score = 29.1 bits (62), Expect = 4.9
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2
Query: 317 PKPXNCTHCDHK 352
PKP NC HCD+K
Sbjct: 440 PKPLNCPHCDYK 451
>BC132859-1|AAI32860.1| 1097|Homo sapiens RE1-silencing
transcription factor protein.
Length = 1097
Score = 29.1 bits (62), Expect = 4.9
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2
Query: 317 PKPXNCTHCDHK 352
PKP NC HCD+K
Sbjct: 358 PKPLNCPHCDYK 369
>BC038985-1|AAH38985.1| 454|Homo sapiens Similar to RE1-silencing
transcription factor protein.
Length = 454
Score = 29.1 bits (62), Expect = 4.9
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2
Query: 317 PKPXNCTHCDHK 352
PKP NC HCD+K
Sbjct: 358 PKPLNCPHCDYK 369
>BC017822-1|AAH17822.1| 460|Homo sapiens Unknown (protein for
IMAGE:4690075) protein.
Length = 460
Score = 29.1 bits (62), Expect = 4.9
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2
Query: 317 PKPXNCTHCDHK 352
PKP NC HCD+K
Sbjct: 358 PKPLNCPHCDYK 369
>AB209750-1|BAD92987.1| 1126|Homo sapiens RE1-silencing
transcription factor variant protein.
Length = 1126
Score = 29.1 bits (62), Expect = 4.9
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2
Query: 317 PKPXNCTHCDHK 352
PKP NC HCD+K
Sbjct: 387 PKPLNCPHCDYK 398
>L20321-1|AAA36658.1| 841|Homo sapiens protein serine/threonine
kinase protein.
Length = 841
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 98 PLAKKGEFINNMNSPECIQQKQPVSSKLVSIPATQTQYCSCHYCVKTVSN 247
PL+ +G M +C+ Q++P +S L+ PA+ H C + +SN
Sbjct: 310 PLSSEGSQTYIMGEGKCLSQEKPRASGLLKSPAS----LKAHTCKQDLSN 355
>EF560744-1|ABQ59054.1| 841|Homo sapiens NEK4 protein protein.
Length = 841
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 98 PLAKKGEFINNMNSPECIQQKQPVSSKLVSIPATQTQYCSCHYCVKTVSN 247
PL+ +G M +C+ Q++P +S L+ PA+ H C + +SN
Sbjct: 310 PLSSEGSQTYIMGEGKCLSQEKPRASGLLKSPAS----LKAHTCKQDLSN 355
>BC063044-1|AAH63044.1| 781|Homo sapiens NEK4 protein protein.
Length = 781
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 98 PLAKKGEFINNMNSPECIQQKQPVSSKLVSIPATQTQYCSCHYCVKTVSN 247
PL+ +G M +C+ Q++P +S L+ PA+ H C + +SN
Sbjct: 310 PLSSEGSQTYIMGEGKCLSQEKPRASGLLKSPAS----LKAHTCKQDLSN 355
>BC015515-1|AAH15515.1| 451|Homo sapiens Unknown (protein for
IMAGE:3913546) protein.
Length = 451
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 98 PLAKKGEFINNMNSPECIQQKQPVSSKLVSIPATQTQYCSCHYCVKTVSN 247
PL+ +G M +C+ Q++P +S L+ PA+ H C + +SN
Sbjct: 310 PLSSEGSQTYIMGEGKCLSQEKPRASGLLKSPAS----LKAHTCKQDLSN 355
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,152,036
Number of Sequences: 237096
Number of extensions: 788550
Number of successful extensions: 1800
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1800
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2479134298
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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