Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0359
(697 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41034-8|AAA82382.1| 669|Caenorhabditis elegans Hypothetical pr... 34 0.11
AL117193-9|CAB60302.2| 737|Caenorhabditis elegans Hypothetical ... 32 0.45
U97193-4|AAB52439.1| 691|Caenorhabditis elegans Hypothetical pr... 30 1.8
AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical... 29 2.4
U53333-10|AAA96163.1| 140|Caenorhabditis elegans Hypothetical p... 29 3.2
U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical pr... 29 3.2
AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-li... 29 3.2
AF067943-1|AAC17662.2| 322|Caenorhabditis elegans Serpentine re... 28 5.5
Z81533-4|CAB04338.1| 280|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z81487-3|CAB03997.2| 345|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z54327-12|CAD56557.1| 543|Caenorhabditis elegans Hypothetical p... 27 9.7
Z54327-11|CAD56556.1| 589|Caenorhabditis elegans Hypothetical p... 27 9.7
Z54307-8|CAD56577.1| 543|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z54307-7|CAD56576.1| 589|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z54307-5|CAD56575.1| 513|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z54307-4|CAD56574.1| 510|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z54307-3|CAD56573.1| 516|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z54307-2|CAD56572.1| 503|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z54307-1|CAA91092.2| 493|Caenorhabditis elegans Hypothetical pr... 27 9.7
U41016-5|AAP46274.1| 811|Caenorhabditis elegans Hypothetical pr... 27 9.7
U41016-4|AAP46275.1| 809|Caenorhabditis elegans Hypothetical pr... 27 9.7
U41016-3|AAM51497.1| 901|Caenorhabditis elegans Hypothetical pr... 27 9.7
U41016-2|AAM51496.1| 899|Caenorhabditis elegans Hypothetical pr... 27 9.7
AF040654-4|AAN65303.2| 886|Caenorhabditis elegans Trp (transien... 27 9.7
AC006726-1|AAF60453.1| 124|Caenorhabditis elegans Hypothetical ... 27 9.7
>U41034-8|AAA82382.1| 669|Caenorhabditis elegans Hypothetical
protein M02D8.5 protein.
Length = 669
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/73 (26%), Positives = 39/73 (53%)
Frame = +2
Query: 161 QPVSSKLVSIPATQTQYCSCHYCVKTVSNEHF*EKNFIVIMHQKRNIVSVAYQNQITARI 340
+P+SSK+ T + C H + ++ + F KN++V+ + +I SV+Y I++ I
Sbjct: 473 KPISSKIFYGLTTSSDDCIAHNSSEPIAQDLF--KNYLVLQYSTTDISSVSYSWAISSGI 530
Query: 341 VITKSKNLQFVIL 379
+ + + V+L
Sbjct: 531 IARTMQPGETVVL 543
>AL117193-9|CAB60302.2| 737|Caenorhabditis elegans Hypothetical
protein Y105C5A.15 protein.
Length = 737
Score = 31.9 bits (69), Expect = 0.45
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = +1
Query: 433 LAIKRYEENAIPTNTEIVPQNNVLKGNVNQLLQIYSKL*NIKMNNFSCCKR 585
L + YE N I NN L+GNV I +KL I FS C +
Sbjct: 415 LVVHNYELNRTFLRITIPNSNNDLEGNVKCFFDIKAKLKEILFTTFSACSQ 465
>U97193-4|AAB52439.1| 691|Caenorhabditis elegans Hypothetical
protein C06A5.6 protein.
Length = 691
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +1
Query: 370 CNFISEQSGNCTVADAVDQKTLAIKRYEENAIPTNTEIVPQNNVLKGNVNQLL 528
CN++ + + A+A + AI A+PT+ +++P +VL N + +L
Sbjct: 451 CNYLEARQNSTQTANA--ESVCAIISESHAALPTDIQVIPSQHVLNENNHTVL 501
>AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical
protein Y106G6H.12 protein.
Length = 975
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 122 INNMNSPECIQQKQPVSSKLVSIPATQTQYCSCHYCVKTVSNE 250
+ N+ SPE I+ P+ V+ P+T S Y +T E
Sbjct: 221 LENLKSPEDIKSPPPIKKNFVATPSTSKSTASYSYSRETPKRE 263
>U53333-10|AAA96163.1| 140|Caenorhabditis elegans Hypothetical
protein F36A4.2 protein.
Length = 140
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 86 YPNLTYQIAYKFGHCQCNSNPYYYCV 9
+P + Y+I YKF H C ++ YCV
Sbjct: 73 FPTMDYEIFYKFNH-NCTADGKTYCV 97
>U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical
protein F31D5.5 protein.
Length = 1788
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -1
Query: 367 LEVFAFCDHNACSYLVLVSNTDNISFLVHYNNEI 266
+ + C+ C+Y + VSN ++ F V+ NN+I
Sbjct: 615 INTYLLCNDRTCTYQLKVSNDNSEYFGVYVNNQI 648
>AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-like
protein MTH-1 protein.
Length = 1757
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -1
Query: 367 LEVFAFCDHNACSYLVLVSNTDNISFLVHYNNEI 266
+ + C+ C+Y + VSN ++ F V+ NN+I
Sbjct: 584 INTYLLCNDRTCTYQLKVSNDNSEYFGVYVNNQI 617
>AF067943-1|AAC17662.2| 322|Caenorhabditis elegans Serpentine
receptor, class x protein93 protein.
Length = 322
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 632 RTLWSFFCGIYEFIYFLLQQLKLFILMFYN 543
R +W++FCG FI+ L L FI++ +N
Sbjct: 257 RRVWTYFCG--TFIWECLHSLDGFIMIIFN 284
>Z81533-4|CAB04338.1| 280|Caenorhabditis elegans Hypothetical
protein F36G9.7 protein.
Length = 280
Score = 27.9 bits (59), Expect = 7.3
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = -3
Query: 671 YLMSSIW*HLLGFRTLWSFFCGIYEFIYFLLQQLKLFILMFYNFE*ICNSWFTFPLSTLF 492
+L SSI+ ++ F L+S E IY++L + F +E +C ++T L
Sbjct: 201 HLFSSIFNLIVNFCQLFSPIPFSNEAIYYVLNKPFQHFSSFPYYEYLCTHYWT----NLT 256
Query: 491 CGT-ISVFVGMAFS 453
C T I VFV ++FS
Sbjct: 257 CYTSIFVFVNVSFS 270
>Z81487-3|CAB03997.2| 345|Caenorhabditis elegans Hypothetical
protein C54E10.4 protein.
Length = 345
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -3
Query: 647 HLLGFRTLWSFFCGIYEFIYFLLQQLKLFILMFYNFE*ICNSWFTFPLS 501
++LGF +W G+ + Y L + +L IC S+F FPL+
Sbjct: 28 NVLGFYMVWFQSPGMQGYKYCLCYMQSVSMLTELYMSWICPSYFFFPLA 76
>Z54327-12|CAD56557.1| 543|Caenorhabditis elegans Hypothetical
protein F14F11.1c protein.
Length = 543
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -3
Query: 551 FYNFE*ICNSWFTFPL--STLFCGTISVFV 468
F+ + ICN WFT L +LFC + FV
Sbjct: 283 FFYVDLICNIWFTIELLIRSLFCPSFHKFV 312
>Z54327-11|CAD56556.1| 589|Caenorhabditis elegans Hypothetical
protein F14F11.1b protein.
Length = 589
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -3
Query: 551 FYNFE*ICNSWFTFPL--STLFCGTISVFV 468
F+ + ICN WFT L +LFC + FV
Sbjct: 329 FFYVDLICNIWFTIELLIRSLFCPSFHKFV 358
>Z54307-8|CAD56577.1| 543|Caenorhabditis elegans Hypothetical
protein F14F11.1c protein.
Length = 543
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -3
Query: 551 FYNFE*ICNSWFTFPL--STLFCGTISVFV 468
F+ + ICN WFT L +LFC + FV
Sbjct: 283 FFYVDLICNIWFTIELLIRSLFCPSFHKFV 312
>Z54307-7|CAD56576.1| 589|Caenorhabditis elegans Hypothetical
protein F14F11.1b protein.
Length = 589
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -3
Query: 551 FYNFE*ICNSWFTFPL--STLFCGTISVFV 468
F+ + ICN WFT L +LFC + FV
Sbjct: 329 FFYVDLICNIWFTIELLIRSLFCPSFHKFV 358
>Z54307-5|CAD56575.1| 513|Caenorhabditis elegans Hypothetical
protein F14F11.1g protein.
Length = 513
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -3
Query: 551 FYNFE*ICNSWFTFPL--STLFCGTISVFV 468
F+ + ICN WFT L +LFC + FV
Sbjct: 253 FFYVDLICNIWFTIELLIRSLFCPSFHKFV 282
>Z54307-4|CAD56574.1| 510|Caenorhabditis elegans Hypothetical
protein F14F11.1f protein.
Length = 510
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -3
Query: 551 FYNFE*ICNSWFTFPL--STLFCGTISVFV 468
F+ + ICN WFT L +LFC + FV
Sbjct: 250 FFYVDLICNIWFTIELLIRSLFCPSFHKFV 279
>Z54307-3|CAD56573.1| 516|Caenorhabditis elegans Hypothetical
protein F14F11.1e protein.
Length = 516
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -3
Query: 551 FYNFE*ICNSWFTFPL--STLFCGTISVFV 468
F+ + ICN WFT L +LFC + FV
Sbjct: 256 FFYVDLICNIWFTIELLIRSLFCPSFHKFV 285
>Z54307-2|CAD56572.1| 503|Caenorhabditis elegans Hypothetical
protein F14F11.1d protein.
Length = 503
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -3
Query: 551 FYNFE*ICNSWFTFPL--STLFCGTISVFV 468
F+ + ICN WFT L +LFC + FV
Sbjct: 243 FFYVDLICNIWFTIELLIRSLFCPSFHKFV 272
>Z54307-1|CAA91092.2| 493|Caenorhabditis elegans Hypothetical
protein F14F11.1a protein.
Length = 493
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -3
Query: 551 FYNFE*ICNSWFTFPL--STLFCGTISVFV 468
F+ + ICN WFT L +LFC + FV
Sbjct: 233 FFYVDLICNIWFTIELLIRSLFCPSFHKFV 262
>U41016-5|AAP46274.1| 811|Caenorhabditis elegans Hypothetical
protein R11G1.6c protein.
Length = 811
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -1
Query: 376 NYKLEVFAFCDHNACSYLVLVSNTDNISFLVHYNNEIFLS 257
+YK + AFC + S L + + D FL HY E F+S
Sbjct: 770 HYKTD--AFCTQSNVSKLQIAKDVDWAHFLSHYQLEEFIS 807
>U41016-4|AAP46275.1| 809|Caenorhabditis elegans Hypothetical
protein R11G1.6d protein.
Length = 809
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -1
Query: 376 NYKLEVFAFCDHNACSYLVLVSNTDNISFLVHYNNEIFLS 257
+YK + AFC + S L + + D FL HY E F+S
Sbjct: 768 HYKTD--AFCTQSNVSKLQIAKDVDWAHFLSHYQLEEFIS 805
>U41016-3|AAM51497.1| 901|Caenorhabditis elegans Hypothetical
protein R11G1.6b protein.
Length = 901
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -1
Query: 376 NYKLEVFAFCDHNACSYLVLVSNTDNISFLVHYNNEIFLS 257
+YK + AFC + S L + + D FL HY E F+S
Sbjct: 860 HYKTD--AFCTQSNVSKLQIAKDVDWAHFLSHYQLEEFIS 897
>U41016-2|AAM51496.1| 899|Caenorhabditis elegans Hypothetical
protein R11G1.6a protein.
Length = 899
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -1
Query: 376 NYKLEVFAFCDHNACSYLVLVSNTDNISFLVHYNNEIFLS 257
+YK + AFC + S L + + D FL HY E F+S
Sbjct: 858 HYKTD--AFCTQSNVSKLQIAKDVDWAHFLSHYQLEEFIS 895
>AF040654-4|AAN65303.2| 886|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 2, isoform b
protein.
Length = 886
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +1
Query: 313 LPKPNNCTHCDHKKQKPPICNFISEQSGNCTVADAVDQKTLAIKRYEENAIPTN 474
+P P + +C H K +CN Q + + V+ K LAI++ +P N
Sbjct: 705 VPSPKSIYYCLHYLTKK-LCNCTKLQQPSKQKSMRVESKNLAIRQRPRKQLPEN 757
>AC006726-1|AAF60453.1| 124|Caenorhabditis elegans Hypothetical
protein Y23B4A.1 protein.
Length = 124
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = +2
Query: 215 SCHYCVKTVSNEHF*EKNFIVIMHQKRNIVSVAYQNQITARIVITKSKNLQFVILSVNNL 394
S Y +T S+ H N ++NI++V Y+ Q++ R+V+ + + + L + +
Sbjct: 58 SFSYIRQTPSSMHDRRNNGPDAELSRKNILTVDYKIQLSRRVVVARRRWFREFFLDLESY 117
Query: 395 AIV 403
A++
Sbjct: 118 ALI 120
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,841,321
Number of Sequences: 27780
Number of extensions: 382324
Number of successful extensions: 1229
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1228
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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