Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0359
         (697 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   2.1  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    23   2.8  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    23   3.7  
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    22   4.8  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   4.8  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    22   6.4  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    22   6.4  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   6.4  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              21   8.5  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              21   8.5  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 357 LLFVITMRAVIWFW*AT 307
           L+FV + R   WFW AT
Sbjct: 19  LIFVTSHRPAWWFWTAT 35


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 3/100 (3%)
 Frame = +1

Query: 322 PNNCTHCDHKKQKPPICNFISEQSGNCTVADAVDQKTLAIKRYEENAIPTNTEIVPQNNV 501
           PNN   CD    +      I+E   +  V+ A   K+  I   E  A+ +      Q +V
Sbjct: 25  PNNWRICDRSLPQKEYNQCIAEAVRDAVVSLAGGLKSFKILPIEPLAVDSVKIGESQGSV 84

Query: 502 LKGNVNQLLQIYSKL*NIKMNNFSCCKRK*I---NSYMPQ 612
                 + +++Y    N+++ N++    K I    SY PQ
Sbjct: 85  TLRQEYKNIKLYGLTKNLEIKNYNIDWDKCILSSESYNPQ 124


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 374 ILSVNNLAIVQWQMLWI 424
           I SV  +AI +W  LW+
Sbjct: 122 ITSVYRIAIDEWDRLWV 138


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 319 KPNNCTHCDHK 351
           KP +C+HCD +
Sbjct: 36  KPYHCSHCDRQ 46


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = +2

Query: 545 YKTSK*TTSAAARESR*IHICHRKNSTVFGTPRD 646
           YK +    +  ++++  +HI    +S+V G+PRD
Sbjct: 260 YKCTLCHETFGSKKTMELHIKTHSDSSVVGSPRD 293


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +2

Query: 197 TQTQYCSCHYCVKTVS 244
           T T  C CH C K  S
Sbjct: 38  THTLPCKCHLCGKAFS 53


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
 Frame = -1

Query: 373 YKLEVFAFCDHNACSYLVLVSNTDNISF---LVHYN 275
           Y+L+++ FCD++    +    N   I F   + HYN
Sbjct: 38  YRLKLYLFCDYDR-DIIPEQKNATKIDFGLSIQHYN 72


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/26 (34%), Positives = 19/26 (73%)
 Frame = -1

Query: 322 VLVSNTDNISFLVHYNNEIFLSKMFI 245
           ++V ++ + + +V+Y+  IFLS +FI
Sbjct: 558 IIVDSSTSGATIVNYSIMIFLSAVFI 583


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 507 LKYIILWYYFCICRNGI 457
           +K I++ + FCIC N +
Sbjct: 1   MKTIVVIFAFCICVNAM 17


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 507 LKYIILWYYFCICRNGI 457
           +K I++ + FCIC N +
Sbjct: 1   MKTIVVIFAFCICVNAM 17


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,423
Number of Sequences: 438
Number of extensions: 5065
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)