Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0356
         (810 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0466 + 29278009-29278575                                         33   0.27 
03_06_0290 + 32878040-32880193,32881607-32881720                       28   7.6  

>02_05_0466 + 29278009-29278575
          Length = 188

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 566 QHQHHYQSQFHNHPGHYRQSACHLPLGYRF 477
           QHQH +  Q H  P H+ Q    +P G+R+
Sbjct: 137 QHQHQHHPQQHGMPQHHPQHGMPMPPGFRY 166


>03_06_0290 + 32878040-32880193,32881607-32881720
          Length = 755

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -1

Query: 207 IQDHLQFLHQKFPRGSRNRHNWKSMLCQFCS 115
           +QD + +L +   RG  N  +W  ++ QFC+
Sbjct: 391 VQDSVNYLTELHSRGLVNCQSWNIVIAQFCN 421


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,819,950
Number of Sequences: 37544
Number of extensions: 373911
Number of successful extensions: 906
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)