Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0348
(656 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical pr... 117 6e-27
D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1 pr... 117 6e-27
U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical p... 86 2e-17
U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical p... 86 2e-17
D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2 pr... 86 2e-17
AL132898-4|CAC14407.3| 968|Caenorhabditis elegans Hypothetical ... 29 2.9
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 29 2.9
AY077615-1|AAL79359.1| 510|Caenorhabditis elegans KSR-2b protein. 29 3.8
AY077614-1|AAL79358.1| 550|Caenorhabditis elegans KSR-2a protein. 29 3.8
AL137227-5|CAB70240.2| 510|Caenorhabditis elegans Hypothetical ... 29 3.8
AL137227-4|CAB70239.2| 550|Caenorhabditis elegans Hypothetical ... 29 3.8
AF026207-2|AAK71372.1| 233|Caenorhabditis elegans Hypothetical ... 28 5.1
AC024775-8|AAK68458.1| 347|Caenorhabditis elegans Hypothetical ... 28 5.1
Z78546-5|CAO79773.1| 962|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z78546-4|CAB01771.3| 920|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z68301-8|CAA92626.2| 484|Caenorhabditis elegans Hypothetical pr... 27 8.9
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 27 8.9
AJ320257-1|CAC44622.1| 877|Caenorhabditis elegans putative telo... 27 8.9
AF400665-1|AAL28024.1| 877|Caenorhabditis elegans CLK-2 protein. 27 8.9
AC024787-1|AAF60607.2| 469|Caenorhabditis elegans Hypothetical ... 27 8.9
AC006605-5|AAK85444.3| 877|Caenorhabditis elegans Clock (biolog... 27 8.9
>Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical
protein T05D4.1 protein.
Length = 365
Score = 117 bits (282), Expect = 6e-27
Identities = 56/99 (56%), Positives = 73/99 (73%)
Frame = +1
Query: 274 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 453
QLLF++ A L++ ISGVI+FHET YQK DDG P +LL+++GIIPGIKVDKGVVP+ G+
Sbjct: 61 QLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTI 120
Query: 454 DECTTQGLDDLAQRCAQYRRTAATSPSGVAC*RLAATPP 570
E TTQGLDDL RCAQY++ A ++++T P
Sbjct: 121 GEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTP 159
Score = 70.1 bits (164), Expect = 1e-12
Identities = 33/53 (62%), Positives = 41/53 (77%)
Frame = +2
Query: 95 MSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTE 253
M++Y Q+ T ++EL+ IA AIV P KGILAADESTG+M KRL IG+ENTE
Sbjct: 1 MASYSQFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTE 53
Score = 61.3 bits (142), Expect = 6e-10
Identities = 28/46 (60%), Positives = 33/46 (71%)
Frame = +3
Query: 507 QKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIV 644
+KDG FAKWRCV KI TPS A++E A+ LARYASICQ +V
Sbjct: 139 KKDGAQFAKWRCVHKISSTTPSVTALKEIASNLARYASICQQNGLV 184
>D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1
protein.
Length = 366
Score = 117 bits (282), Expect = 6e-27
Identities = 56/99 (56%), Positives = 73/99 (73%)
Frame = +1
Query: 274 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 453
QLLF++ A L++ ISGVI+FHET YQK DDG P +LL+++GIIPGIKVDKGVVP+ G+
Sbjct: 61 QLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTI 120
Query: 454 DECTTQGLDDLAQRCAQYRRTAATSPSGVAC*RLAATPP 570
E TTQGLDDL RCAQY++ A ++++T P
Sbjct: 121 GEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTP 159
Score = 70.1 bits (164), Expect = 1e-12
Identities = 33/53 (62%), Positives = 41/53 (77%)
Frame = +2
Query: 95 MSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTE 253
M++Y Q+ T ++EL+ IA AIV P KGILAADESTG+M KRL IG+ENTE
Sbjct: 1 MASYSQFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTE 53
Score = 56.0 bits (129), Expect = 2e-08
Identities = 27/47 (57%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Frame = +3
Query: 507 QKDGCHFAKWRCVLKIGRNTPSYQAIQENA-NVLARYASICQSQRIV 644
+KDG FAKWRCV KI TPS A++E A N+ +RYASICQ +V
Sbjct: 139 KKDGAQFAKWRCVHKISSTTPSVTALKEIASNLGSRYASICQQNGLV 185
>U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical
protein F01F1.12a protein.
Length = 366
Score = 86.2 bits (204), Expect = 2e-17
Identities = 43/80 (53%), Positives = 58/80 (72%)
Frame = +1
Query: 274 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 453
QLLF++ L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+
Sbjct: 65 QLLFTTPN-LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTI 123
Query: 454 DECTTQGLDDLAQRCAQYRR 513
E TTQGLD LA+R A +++
Sbjct: 124 GEGTTQGLDKLAERAAAFKK 143
Score = 71.3 bits (167), Expect = 5e-13
Identities = 31/46 (67%), Positives = 37/46 (80%)
Frame = +3
Query: 507 QKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIV 644
+K GC FAKWRCVL IG +TPS+ + ENANVLARYASICQ+ +V
Sbjct: 142 KKGGCGFAKWRCVLNIGTHTPSHLGMLENANVLARYASICQANGLV 187
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = +2
Query: 119 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTE 253
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNE 57
>U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical
protein F01F1.12b protein.
Length = 259
Score = 86.2 bits (204), Expect = 2e-17
Identities = 43/80 (53%), Positives = 58/80 (72%)
Frame = +1
Query: 274 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 453
QLLF++ L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+
Sbjct: 65 QLLFTTPN-LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTI 123
Query: 454 DECTTQGLDDLAQRCAQYRR 513
E TTQGLD LA+R A +++
Sbjct: 124 GEGTTQGLDKLAERAAAFKK 143
Score = 71.3 bits (167), Expect = 5e-13
Identities = 31/46 (67%), Positives = 37/46 (80%)
Frame = +3
Query: 507 QKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIV 644
+K GC FAKWRCVL IG +TPS+ + ENANVLARYASICQ+ +V
Sbjct: 142 KKGGCGFAKWRCVLNIGTHTPSHLGMLENANVLARYASICQANGLV 187
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = +2
Query: 119 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTE 253
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNE 57
>D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2
protein.
Length = 366
Score = 86.2 bits (204), Expect = 2e-17
Identities = 43/80 (53%), Positives = 58/80 (72%)
Frame = +1
Query: 274 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 453
QLLF++ L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+
Sbjct: 65 QLLFTTPN-LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTI 123
Query: 454 DECTTQGLDDLAQRCAQYRR 513
E TTQGLD LA+R A +++
Sbjct: 124 GEGTTQGLDKLAERAAAFKK 143
Score = 71.3 bits (167), Expect = 5e-13
Identities = 31/46 (67%), Positives = 37/46 (80%)
Frame = +3
Query: 507 QKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIV 644
+K GC FAKWRCVL IG +TPS+ + ENANVLARYASICQ+ +V
Sbjct: 142 KKGGCGFAKWRCVLNIGTHTPSHLGMLENANVLARYASICQANGLV 187
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = +2
Query: 119 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTE 253
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNE 57
>AL132898-4|CAC14407.3| 968|Caenorhabditis elegans Hypothetical
protein Y59A8B.6 protein.
Length = 968
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/31 (35%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = -1
Query: 524 VAAVLLYWAQRWARSSRPWVVHS-SSDPNSG 435
+AA L+W++R + +R W V + + DP++G
Sbjct: 872 IAAARLFWSERKIKKAREWFVRAVNLDPDNG 902
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +3
Query: 354 G*RWNPSGLPAGEEGHH--PRHQGRQGCRPAVRIGRRMHHPGSGRPRP 491
G R P P G GHH P H G P+ R G HH RP P
Sbjct: 382 GGRHGPPHCP-GRHGHHGPPHHHHHDGRSPS-RHGHHHHHHHGCRPFP 427
>AY077615-1|AAL79359.1| 510|Caenorhabditis elegans KSR-2b protein.
Length = 510
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/53 (35%), Positives = 22/53 (41%)
Frame = +2
Query: 443 SDRKTNAPPRVWTTSPSAAPSTEGRLPLRQVALRAEDWPQHPLVPSYPGKRQC 601
S NAPP T+S S PST P + H +VPS RQC
Sbjct: 48 SSNPINAPPPTATSSSSVLPSTSSE-PPPPASAPPRISIYHKMVPSKSKFRQC 99
>AY077614-1|AAL79358.1| 550|Caenorhabditis elegans KSR-2a protein.
Length = 550
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/53 (35%), Positives = 22/53 (41%)
Frame = +2
Query: 443 SDRKTNAPPRVWTTSPSAAPSTEGRLPLRQVALRAEDWPQHPLVPSYPGKRQC 601
S NAPP T+S S PST P + H +VPS RQC
Sbjct: 52 SSNPINAPPPTATSSSSVLPSTSSE-PPPPASAPPRISIYHKMVPSKSKFRQC 103
>AL137227-5|CAB70240.2| 510|Caenorhabditis elegans Hypothetical
protein F58D5.4b protein.
Length = 510
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/53 (35%), Positives = 22/53 (41%)
Frame = +2
Query: 443 SDRKTNAPPRVWTTSPSAAPSTEGRLPLRQVALRAEDWPQHPLVPSYPGKRQC 601
S NAPP T+S S PST P + H +VPS RQC
Sbjct: 48 SSNPINAPPPTATSSSSVLPSTSSE-PPPPASAPPRISIYHKMVPSKSKFRQC 99
>AL137227-4|CAB70239.2| 550|Caenorhabditis elegans Hypothetical
protein F58D5.4a protein.
Length = 550
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/53 (35%), Positives = 22/53 (41%)
Frame = +2
Query: 443 SDRKTNAPPRVWTTSPSAAPSTEGRLPLRQVALRAEDWPQHPLVPSYPGKRQC 601
S NAPP T+S S PST P + H +VPS RQC
Sbjct: 52 SSNPINAPPPTATSSSSVLPSTSSE-PPPPASAPPRISIYHKMVPSKSKFRQC 103
>AF026207-2|AAK71372.1| 233|Caenorhabditis elegans Hypothetical
protein H42K12.2 protein.
Length = 233
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/52 (25%), Positives = 21/52 (40%)
Frame = +2
Query: 461 APPRVWTTSPSAAPSTEGRLPLRQVALRAEDWPQHPLVPSYPGKRQCSRPLR 616
+P R WT + P ++ A P L+ +PG R+C+ R
Sbjct: 130 SPERRWTLTKGGLPESDNNRTCCGCVSSAASGPSSSLILCFPGGRRCNTHAR 181
>AC024775-8|AAK68458.1| 347|Caenorhabditis elegans Hypothetical
protein Y41D4A.8 protein.
Length = 347
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 361 DGTPLVSLLEKKGII--PGIKVDKGVVPLFGSEDECT 465
D +PLVS+L G+I P + + VPLF ED CT
Sbjct: 10 DPSPLVSVL---GLIKSPDLMIGSTEVPLFEEEDMCT 43
>Z78546-5|CAO79773.1| 962|Caenorhabditis elegans Hypothetical
protein T21H8.1b protein.
Length = 962
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +2
Query: 89 PTMSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDI 235
P+MST PELQ++L ++A A + + E G ++++D+
Sbjct: 162 PSMSTVSCPEYPELQDKLHRLAMARDSLQLQVSVLSEQVGAQKEKIKDL 210
>Z78546-4|CAB01771.3| 920|Caenorhabditis elegans Hypothetical
protein T21H8.1a protein.
Length = 920
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +2
Query: 89 PTMSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDI 235
P+MST PELQ++L ++A A + + E G ++++D+
Sbjct: 162 PSMSTVSCPEYPELQDKLHRLAMARDSLQLQVSVLSEQVGAQKEKIKDL 210
>Z68301-8|CAA92626.2| 484|Caenorhabditis elegans Hypothetical
protein W01B6.3 protein.
Length = 484
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 258 PSSLSPTAIQL*RCALREHLWCDPVPRDPLP 350
P +++ T + RC + WCD PR PLP
Sbjct: 344 PDTMNSTTTLIGRC---DFDWCDDTPRVPLP 371
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -1
Query: 482 SSRPWVVHSSSDPNSGTTPLSTLMPGMMPFFSSRETRGVPSSA 354
+S P VV SSS +S T ST+ P +S + PS++
Sbjct: 461 TSTPLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTS 503
>AJ320257-1|CAC44622.1| 877|Caenorhabditis elegans putative
telomere binding protein protein.
Length = 877
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +3
Query: 528 AKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVANC 653
++WR ++ + P+YQ IQ + ++L I +S +I+ C
Sbjct: 238 SQWRRMMFLIFQEPTYQGIQVHESLLTTLFLISKSDQILKRC 279
>AF400665-1|AAL28024.1| 877|Caenorhabditis elegans CLK-2 protein.
Length = 877
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +3
Query: 528 AKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVANC 653
++WR ++ + P+YQ IQ + ++L I +S +I+ C
Sbjct: 238 SQWRRMMFLIFQEPTYQGIQVHESLLTTLFLISKSDQILKRC 279
>AC024787-1|AAF60607.2| 469|Caenorhabditis elegans Hypothetical
protein Y46C8AR.1 protein.
Length = 469
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 551 LQHATPLGEVAAVLLYWAQRWARSSRPWVVHSSS 450
LQ+ TP+ +VLL+W ++R S VH S
Sbjct: 387 LQNHTPVNTTQSVLLHWYSPYSRYSSTASVHGLS 420
>AC006605-5|AAK85444.3| 877|Caenorhabditis elegans Clock
(biological timing) abnormalityprotein 2 protein.
Length = 877
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +3
Query: 528 AKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVANC 653
++WR ++ + P+YQ IQ + ++L I +S +I+ C
Sbjct: 238 SQWRRMMFLIFQEPTYQGIQVHESLLTTLFLISKSDQILKRC 279
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,615,094
Number of Sequences: 27780
Number of extensions: 389504
Number of successful extensions: 1245
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1244
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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