Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0348
         (656 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          26   0.36 
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    23   3.4  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        23   3.4  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   4.5  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   4.5  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   4.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   5.9  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   7.8  

>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +3

Query: 456 RMHHPGSGRPRPALRPVQKDGCHFAKWR 539
           + HHP   RPR    P   D  H+ +++
Sbjct: 153 KRHHPRYKRPRTTFEPRATDSRHYDRYK 180


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 510 SVLGAALGEVVQTLGGAFVFRS 445
           S +   LG +V   GG F+FR+
Sbjct: 287 SQINGILGSLVAITGGCFLFRA 308


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 14/58 (24%), Positives = 26/58 (44%)
 Frame = -1

Query: 557 ANLQHATPLGEVAAVLLYWAQRWARSSRPWVVHSSSDPNSGTTPLSTLMPGMMPFFSS 384
           A+L+ +     VAA  + +AQ+    S        S  ++ T+P +     M P+ S+
Sbjct: 37  ASLESSLSAAAVAAAAVNYAQQHNSPSPTGSSPQHSGSSASTSPAARTTSSMYPYVSA 94


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +3

Query: 201 PPVQWASVCRTSAWRTQRE 257
           PP  W  V   SAW  + E
Sbjct: 160 PPTNWVGVFGGSAWSWREE 178


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +3

Query: 201 PPVQWASVCRTSAWRTQRE 257
           PP  W  V   SAW  + E
Sbjct: 160 PPTNWVGVFGGSAWSWREE 178


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +3

Query: 201 PPVQWASVCRTSAWRTQRE 257
           PP  W SV   SAW+   E
Sbjct: 160 PPNNWLSVFWGSAWQWNEE 178


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 13/43 (30%), Positives = 17/43 (39%)
 Frame = +3

Query: 375  GLPAGEEGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPRPALRP 503
            G   G+ G    H G +G      +G   + P SG P P   P
Sbjct: 1821 GSQYGQYGAPYDHYGSRGSVGRRSVGSARNIPVSGSPEPPPPP 1863


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +2

Query: 554 WPQHPLVP 577
           WPQH L+P
Sbjct: 583 WPQHMLIP 590


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,513
Number of Sequences: 438
Number of extensions: 4893
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)