Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0345
         (618 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0633 + 20120560-20123464,20123608-20123672                       31   0.97 
03_02_0910 + 12317493-12317960,12319678-12319734,12320592-123206...    31   0.97 
03_02_0488 - 8824980-8825267,8825364-8827775                           30   1.3  
03_03_0193 - 15312568-15312753,15312811-15312933,15313112-153131...    30   1.7  
03_06_0340 + 33252677-33252864,33253086-33254442,33254565-332546...    28   6.8  
02_02_0461 + 10534733-10536302,10536347-10536396,10536845-10538227     28   6.8  

>07_03_0633 + 20120560-20123464,20123608-20123672
          Length = 989

 Score = 30.7 bits (66), Expect = 0.97
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -3

Query: 388 LLRGWSLASMDNSNTAAKPEILSYFA*RRNENLMCRVVGGALS 260
           LLRGW   S   S T  + +I+  FA  + ENL  + V    S
Sbjct: 211 LLRGWVFTSRSCSRTGLEQDIIESFASEQEENLQRKSVSSESS 253


>03_02_0910 +
           12317493-12317960,12319678-12319734,12320592-12320666,
           12321219-12321299,12321472-12321546,12321818-12321862,
           12321975-12322064,12322153-12322254,12322366-12322420,
           12324966-12325027,12325521-12325555,12325877-12326115,
           12326219-12328035
          Length = 1066

 Score = 30.7 bits (66), Expect = 0.97
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -1

Query: 153 ICSSSNAPFAPASVPVARAIPCSSNVFSKIAPTNQLPCPRP 31
           +CS +  P  PA  P     P   N+  K APT + PCP P
Sbjct: 1   MCSCARFPH-PALQPAPAPAPPPPNLKPKPAPTTRGPCPSP 40


>03_02_0488 - 8824980-8825267,8825364-8827775
          Length = 899

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +3

Query: 168 HTIRRCYEVERAYPFKQFIFSENEHLPSTHE 260
           H   RCY+ E+ +  ++F+   +E LPS+ E
Sbjct: 636 HRKSRCYQAEKNHLHREFVLVGSEQLPSSEE 666


>03_03_0193 -
           15312568-15312753,15312811-15312933,15313112-15313134,
           15313196-15313349,15314443-15314754
          Length = 265

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
 Frame = +3

Query: 159 PCPHTIRRCYEVERAY-P-FKQFIFSENEHLPSTHEDKAPPTTRHMRFSFLLQAKYERIS 332
           PC  TIR        Y P +K +I SE     +   D A    + +   FLL  +++  S
Sbjct: 177 PCSFTIRGFLRAVPTYLPLWKLYIVSEKPLTTTRPRDYAQILIQEIE-KFLLDLRFKYRS 235

Query: 333 GLAAVLLLSMDASDQPLSNPRADQF 407
            + ++ +++ D ++  LS  +AD+F
Sbjct: 236 RIRSLYIVTTDINEHILSIMKADEF 260


>03_06_0340 +
           33252677-33252864,33253086-33254442,33254565-33254667,
           33256081-33256171,33257208-33257300,33258316-33258471,
           33258583-33258655
          Length = 686

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -1

Query: 372 HWRPWTTAIPQLSRRFFHTSLEEGMKT 292
           HW+P    + +   RFFH+SL++ M+T
Sbjct: 568 HWQPNRQQLTEF--RFFHSSLQQSMET 592


>02_02_0461 + 10534733-10536302,10536347-10536396,10536845-10538227
          Length = 1000

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +3

Query: 81  LKSMEWHVRLGRTQVQTARYLMNIWLPCPHTIRRCYEVERAYPFKQFIFSEN 236
           LKS  W ++   T++  A  L  ++LP  H ++RC+     YP K   F E+
Sbjct: 434 LKSELWELKQNNTEILPALRLSYLYLP-TH-LKRCFSFCAVYP-KDHKFEED 482


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,283,080
Number of Sequences: 37544
Number of extensions: 397225
Number of successful extensions: 1055
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1490248872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)