Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0343
(665 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 135 2e-32
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 51 8e-07
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 51 8e-07
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 50 2e-06
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 50 2e-06
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 48 5e-06
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 46 2e-05
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 45 6e-05
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 44 1e-04
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 36 0.034
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 33 0.14
Z73969-8|CAA98239.1| 351|Caenorhabditis elegans Hypothetical pr... 31 0.97
U97008-6|AAB52307.1| 323|Caenorhabditis elegans Serpentine rece... 29 3.9
AF067950-2|AAG24155.2| 365|Caenorhabditis elegans Serpentine re... 28 5.2
U50300-1|AAC48108.2| 349|Caenorhabditis elegans Serpentine rece... 28 6.8
U39998-5|AAK71421.2| 408|Caenorhabditis elegans Gustatory recep... 28 6.8
AL132949-10|CAB61082.1| 721|Caenorhabditis elegans Hypothetical... 28 6.8
Z81104-2|CAB70254.1| 233|Caenorhabditis elegans Hypothetical pr... 27 9.1
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 27 9.1
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 9.1
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 9.1
AF016445-2|AAC69064.1| 376|Caenorhabditis elegans Serpentine re... 27 9.1
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 135 bits (327), Expect = 2e-32
Identities = 61/73 (83%), Positives = 67/73 (91%)
Frame = +2
Query: 296 KQTLQNEQPLQVARCTKIINADSNDPKYIINVKQFAKFVVDLQDSVAPTDIEEGMRVGVD 475
KQ +Q EQPLQVARCTKII +D +DP+Y+INVKQFAKFVVDL DSVAPTDIEEGMRVGVD
Sbjct: 86 KQAMQQEQPLQVARCTKIITSDKHDPRYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVD 145
Query: 476 RNKYQIHIPLPRK 514
RNKYQIH+PLP K
Sbjct: 146 RNKYQIHLPLPAK 158
Score = 88.6 bits (210), Expect = 3e-18
Identities = 42/47 (89%), Positives = 44/47 (93%), Gaps = 1/47 (2%)
Frame = +1
Query: 496 HTPA-SKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLL 633
H P +KIDPTVTMMQVEEKPDVTYSDVGGCK+QIEKLREVVETPLL
Sbjct: 152 HLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLL 198
Score = 74.9 bits (176), Expect = 5e-14
Identities = 36/73 (49%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +3
Query: 45 MPDHLGNDMRXXXXXXXXXXXXXX-SLDEGDIALLKSYGQGQYTKIIKEVEEGIQTVMKR 221
MPDHLG+DMR +LDEGDIA+LK YGQG Y + +K ++ I+ +K+
Sbjct: 1 MPDHLGDDMRKTKKDDTKEEEKNFQALDEGDIAVLKRYGQGPYAEQLKTLDADIENCLKK 60
Query: 222 VNELTGIKESDQG 260
VNEL+G+KESD G
Sbjct: 61 VNELSGVKESDTG 73
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 50.8 bits (116), Expect = 8e-07
Identities = 21/41 (51%), Positives = 31/41 (75%)
Frame = +1
Query: 508 SKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPL 630
SK+DP V++M VE+ PD TY VGG QI++++EV+E P+
Sbjct: 134 SKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPV 174
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 50.8 bits (116), Expect = 8e-07
Identities = 21/41 (51%), Positives = 31/41 (75%)
Frame = +1
Query: 508 SKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPL 630
SK+DP V++M VE+ PD TY VGG QI++++EV+E P+
Sbjct: 155 SKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPV 195
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/41 (48%), Positives = 32/41 (78%)
Frame = +1
Query: 508 SKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPL 630
+K+DP V++M VE+ PD TY VGG +QI++++EV+E P+
Sbjct: 139 NKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPV 179
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 374 KYIINVKQFAKFVVDLQDSVAPTDIEEGMRVGVDRNKYQIHIPLPRK 514
K ++ V K+VVD+ S+ + G RV + + Y +H LP K
Sbjct: 94 KVLVKVHPEGKYVVDVDKSIDINSLNTGARVALRADSYALHKLLPNK 140
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +1
Query: 511 KIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLL 633
++DP V M E+ +++YSDVGG EQI +LREVVE PL+
Sbjct: 123 EVDPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLI 163
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +1
Query: 511 KIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLL 633
++DP V M E+ +++YSDVGG EQI +LREVVE PL+
Sbjct: 131 EVDPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLI 171
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 48.4 bits (110), Expect = 5e-06
Identities = 19/38 (50%), Positives = 30/38 (78%)
Frame = +1
Query: 517 DPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPL 630
DP V++M++E+ P TY+DVGG +QI++++E VE PL
Sbjct: 171 DPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPL 208
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 46.0 bits (104), Expect = 2e-05
Identities = 18/41 (43%), Positives = 29/41 (70%)
Frame = +1
Query: 517 DPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLLG 639
D ++ M++ +EKPD++Y D+GG Q +++RE VE PL G
Sbjct: 144 DSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHG 184
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +1
Query: 511 KIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPL 630
KID +VE+ P T+ D+GGC+ QI++L+E VE PL
Sbjct: 164 KIDSNAMGHKVEKTPKETFDDIGGCESQIQELKESVELPL 203
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +1
Query: 508 SKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPL 630
++ D V M+V+E+P YSD+GGC +QI++L E V P+
Sbjct: 157 AEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPM 197
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 35.5 bits (78), Expect = 0.034
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 517 DPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPL 630
DP + E D+ Y D+GG ++Q+ +++E+VE PL
Sbjct: 193 DPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPL 230
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 511 KIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPL 630
K P+ V E P+ T+SD+GG + +L+E+V+ P+
Sbjct: 464 KSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPV 503
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 33.5 bits (73), Expect = 0.14
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 517 DPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPL 630
DP + E +V Y D+GG ++Q+ +++E+VE PL
Sbjct: 192 DPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPL 229
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 511 KIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPL 630
K P+ V E P+ T+SD+GG + +L+E+V+ P+
Sbjct: 463 KSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPV 502
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 33.5 bits (73), Expect = 0.14
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 517 DPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPL 630
DP + E +V Y D+GG ++Q+ +++E+VE PL
Sbjct: 192 DPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPL 229
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 511 KIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPL 630
K P+ V E P+ T+SD+GG + +L+E+V+ P+
Sbjct: 463 KSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPV 502
>Z73969-8|CAA98239.1| 351|Caenorhabditis elegans Hypothetical
protein C12D8.12 protein.
Length = 351
Score = 30.7 bits (66), Expect = 0.97
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -3
Query: 573 VTVCYIRFLLDLHHGDRWIYFRGRGMWIWYLL 478
++V ++ L +G +WIYF G+ + W+L+
Sbjct: 102 ISVHFVYRYKALKYGSKWIYFHGKYTFAWFLI 133
>U97008-6|AAB52307.1| 323|Caenorhabditis elegans Serpentine
receptor, class h protein275 protein.
Length = 323
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -3
Query: 423 CKSTTNFANCFTLIMYFGSFESALMIFVHRATCSGC--SFCS 304
C+S N CF +I G F + +M+++H C FCS
Sbjct: 268 CQSANNL--CFIIIAAHGLFSTFIMLYIHSPYREACFRIFCS 307
>AF067950-2|AAG24155.2| 365|Caenorhabditis elegans Serpentine
receptor, class w protein143 protein.
Length = 365
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -1
Query: 584 HPPTSLYVTSGFSSTCIMVTVGSIFEAGVCGSGIYYDPHQPSC 456
HPPTSL F+ CI + G I A GS I H SC
Sbjct: 156 HPPTSL-----FTMICINLIFGPISIATFFGSDITSQNHTSSC 193
>U50300-1|AAC48108.2| 349|Caenorhabditis elegans Serpentine
receptor, class x protein3 protein.
Length = 349
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -3
Query: 468 PTLMPSSISVGATESCKSTTNFANCFTLIMYFGSFESALM 349
PT++ SS V + K T F + F YF +F +M
Sbjct: 67 PTIITSSFLVSTEKKSKWTLVFGSAFLFFWYFETFTQIVM 106
>U39998-5|AAK71421.2| 408|Caenorhabditis elegans Gustatory receptor
family protein 5 protein.
Length = 408
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = -3
Query: 393 FTLIM---YFGSFESALMIFVHRATCSGCSFCSVCLSAARSHK 274
FTL+M + SF L+ C+ C+FCSV ++ AR H+
Sbjct: 284 FTLMMLNQHLSSFTDFLICMPFILFCT-CAFCSVTIAPARVHE 325
>AL132949-10|CAB61082.1| 721|Caenorhabditis elegans Hypothetical
protein Y53F4B.12 protein.
Length = 721
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 102 PALLYHLSLCAYHSLNGQAFLIFIPTKRLI 13
PA Y LS+C+ +L+G F+P R+I
Sbjct: 304 PAAKYMLSVCSVCALSGGVLASFLPATRVI 333
>Z81104-2|CAB70254.1| 233|Caenorhabditis elegans Hypothetical
protein M199.4 protein.
Length = 233
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = -3
Query: 510 RGRGMWIWYLLRST-PTLMP-SSISVGAT--ESCKSTTNFANC 394
+G + ++ LL++ P + P S + +GA E+C S +NF NC
Sbjct: 120 KGEFISVFALLKNRFPNIKPVSQVMIGARRLETCASISNFGNC 162
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 8/57 (14%)
Frame = +1
Query: 484 IPDPHTPASKIDPTV---TMMQVEEKPDVTYSDV-----GGCKEQIEKLREVVETPL 630
+P P T A ++PTV T ++ +EK +V +++ C+E+I++L VE L
Sbjct: 4664 VPVPETSAPTVEPTVEKHTPVESKEKSEVQPAEIVEQKDVTCEEEIKELLTEVEVEL 4720
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 8/57 (14%)
Frame = +1
Query: 484 IPDPHTPASKIDPTV---TMMQVEEKPDVTYSDV-----GGCKEQIEKLREVVETPL 630
+P P T A ++PTV T ++ +EK +V +++ C+E+I++L VE L
Sbjct: 4664 VPVPETSAPTVEPTVEKHTPVESKEKSEVQPAEIVEQKDVTCEEEIKELLTEVEVEL 4720
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 8/57 (14%)
Frame = +1
Query: 484 IPDPHTPASKIDPTV---TMMQVEEKPDVTYSDV-----GGCKEQIEKLREVVETPL 630
+P P T A ++PTV T ++ +EK +V +++ C+E+I++L VE L
Sbjct: 4664 VPVPETSAPTVEPTVEKHTPVESKEKSEVQPAEIVEQKDVTCEEEIKELLTEVEVEL 4720
>AF016445-2|AAC69064.1| 376|Caenorhabditis elegans Serpentine
receptor, class w protein134 protein.
Length = 376
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = -1
Query: 581 PPTSLYVTSGFSSTCIMVTVGSIFE--AGVCG 492
P T+L V G S+ CI+ ++ ++FE GV G
Sbjct: 157 PSTALRVIFGVSAICIIFSISTVFENDVGVVG 188
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,440,329
Number of Sequences: 27780
Number of extensions: 289687
Number of successful extensions: 995
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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