Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0342
(618 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 1e-13
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 41 7e-04
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 37 0.015
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.020
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.020
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 36 0.026
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 34 0.080
SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.080
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.19
SB_6444| Best HMM Match : CRAM_rpt (HMM E-Value=3e-11) 33 0.25
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 32 0.32
SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.32
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.57
SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05) 31 0.57
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.75
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 30 1.3
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 30 1.3
SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 2.3
SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26) 29 2.3
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 29 3.0
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_31266| Best HMM Match : PKI (HMM E-Value=1) 29 4.0
SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_59800| Best HMM Match : SPRY (HMM E-Value=7.8e-05) 28 5.3
SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28) 28 5.3
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 28 5.3
SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40) 28 5.3
SB_38893| Best HMM Match : UMPH-1 (HMM E-Value=2.3e-21) 28 7.0
SB_6969| Best HMM Match : Astacin (HMM E-Value=0) 28 7.0
SB_52520| Best HMM Match : Fibrinogen_C (HMM E-Value=0) 27 9.2
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 27 9.2
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 27 9.2
SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039) 27 9.2
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 73.3 bits (172), Expect = 1e-13
Identities = 35/63 (55%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Frame = +2
Query: 257 TRLAAD--VGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 430
TRLA D VGK G+R+F+G+ + K SDGL+GLYRGF +S GII+YR YFG YD
Sbjct: 139 TRLANDAKVGKKGGERQFNGMIDVYKKTIASDGLVGLYRGFVISCVGIIVYRGFYFGLYD 198
Query: 431 TAR 439
T +
Sbjct: 199 TLK 201
Score = 71.3 bits (167), Expect = 6e-13
Identities = 40/84 (47%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRY- 179
++D R + +G LSFWRGN AN IRYFPTQALNFAFKD+ K +F KKT
Sbjct: 56 VIDCTSRTYRSEGFLSFWRGNLANCIRYFPTQALNFAFKDQVKALF---KPKKTDSNAIK 112
Query: 180 FXXXXXXXXXXXXTSLCFVYPLDF 251
F SL FVY LD+
Sbjct: 113 FSKNIASGGAAGAMSLFFVYSLDY 136
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 46.0 bits (104), Expect = 2e-05
Identities = 18/44 (40%), Positives = 31/44 (70%)
Frame = +3
Query: 3 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 134
++ ++I KE+G+L +++GN NVIR FP A+ FA ++YK+
Sbjct: 74 VLPTLIQIGKEEGILGYFKGNGTNVIRIFPYSAVQFAAYEEYKK 117
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 41.1 bits (92), Expect = 7e-04
Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +2
Query: 299 EFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDT-ARGCCP 451
++SG+G ++KI++ +GL G ++G G ++ I+ Y A F Y+ +G P
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKKGIAP 641
Score = 34.3 bits (75), Expect = 0.080
Identities = 12/38 (31%), Positives = 26/38 (68%)
Frame = +3
Query: 21 RIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 134
+I +++GL +++GN N++R P A+ FA +++K+
Sbjct: 600 KIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/53 (22%), Positives = 27/53 (50%)
Frame = +2
Query: 281 KGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTAR 439
+G+G ++S + I +S+G IGL++G ++ + F Y+ ++
Sbjct: 713 RGEGMFKYSSTWDGFKVIVRSEGFIGLFKGMWPNLLKVAPTIGIQFAVYEVSK 765
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/53 (41%), Positives = 29/53 (54%)
Frame = +3
Query: 3 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKK 161
IV F + +E G+ S WRGN ANVI+ P + F +K K+ L G D K
Sbjct: 176 IVSGFKMMLREGGIKSLWRGNGANVIKIAPESGIKFFAYEKAKK--LVGSDTK 226
Score = 31.9 bits (69), Expect = 0.43
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 299 EFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTAR 439
++ GL + S I++ +G+ YRG S+ GII Y Y+T +
Sbjct: 265 QYRGLLHAASVIYQKEGIRSFYRGLFPSLLGIIPYAGIDLAVYETLK 311
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 239 PPRLRSTRLAADVG-KGDGQREFSGLGNCISKIFKSDGLIGLYRG 370
P L TRL A KG GQ + + + + KI DG GLYRG
Sbjct: 347 PLSLVRTRLQAQAREKGGGQGD--NMVSVLRKIITEDGFKGLYRG 389
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +3
Query: 6 VDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFW 173
+DA ++IP+ +GL S WRG ++ P + F D+ K + G + +T W
Sbjct: 64 IDALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQLK-ISYGFKNNETNLW 118
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 36.7 bits (81), Expect = 0.015
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 3 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFA 113
++ F + K +G+ +FW+GN + IR FP A+ +A
Sbjct: 97 LIRTFASVYKREGIKAFWKGNGVSCIRLFPYSAVQYA 133
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 36.3 bits (80), Expect = 0.020
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +3
Query: 3 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 137
++ AF I + +GLL++++GN A ++R FP A+ F + Y +V
Sbjct: 13 VLTAFRAIYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKV 57
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 317 NCISKIFKSDGLI-GLYRGFGVSVQGIIIYRASYFGFYDTAR 439
N + ++K DG+ GLYRG ++ + A FG Y+ +
Sbjct: 217 NTLVNVYKDDGIRRGLYRGLSINYLRVCPQVAIMFGVYEVTK 258
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 36.3 bits (80), Expect = 0.020
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 293 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFY 427
Q ++G +C+ K+F S+GL G +RG ++ I A YFG +
Sbjct: 294 QMAYTGSLDCLKKVFHSEGLRGCFRGMAITTTRDIPAFALYFGSF 338
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +2
Query: 302 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFG 421
++G+ +C +I K + ++GLY+G + G+ + A FG
Sbjct: 191 YNGVFDCFKQIIKRESVLGLYKGMASPLAGLGLINAIIFG 230
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 35.9 bits (79), Expect = 0.026
Identities = 14/49 (28%), Positives = 31/49 (63%)
Frame = +2
Query: 293 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTAR 439
+++++GL N ++I++ +G+ YRG+ ++ GI+ Y F Y+T +
Sbjct: 22 KKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYETCK 70
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 34.3 bits (75), Expect = 0.080
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 3 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 143
+ +A R+ KE+G+L+ WRG +R A A + KQ+ L
Sbjct: 38 VFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATYSQAKQLLL 84
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/50 (26%), Positives = 31/50 (62%)
Frame = +2
Query: 224 SVLRVPPRLRSTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 373
+V +P + TR+ ++ DG+ E+ G + +++I +++G+ L++GF
Sbjct: 108 TVASMPVDIAKTRIQ-NMRIIDGKPEYKGTMDVLARIVRNEGVFALWKGF 156
>SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 313
Score = 34.3 bits (75), Expect = 0.080
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 302 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGII-IYRASYFGF 424
F+G +C K +++G GLY+G + G+ I+ ++GF
Sbjct: 68 FTGTFDCAMKTIRNEGFFGLYKGMAAPITGVTPIFAICFWGF 109
>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +3
Query: 24 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 137
+P+E L W G F++VI F A+N AF+++YK++
Sbjct: 272 LPREVYLFYSWIGAFSSVINPFIYGAMNPAFREEYKKI 309
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 299 EFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFY 427
+FSG+ + K++G+ L++G G ++ G+ RA YF Y
Sbjct: 773 KFSGIVPYARYMVKNEGIQSLFKGLGTTLLGVTPSRAIYFAIY 815
>SB_6444| Best HMM Match : CRAM_rpt (HMM E-Value=3e-11)
Length = 2297
Score = 32.7 bits (71), Expect = 0.25
Identities = 24/82 (29%), Positives = 40/82 (48%)
Frame = +1
Query: 310 SRKLHQQDLQVRRSDRSVQRFRCVRARYHHLPCLILRFLRHGPRMLPDPKNTPIVISWAI 489
SRK+ +L+ ++++SV + R Y + + +R R G P PK+TP +S A
Sbjct: 1734 SRKM-LWELETAKANKSVDEPK--RRSYEPVTGVEMRQKRPGAEARPRPKSTP--VSTAF 1788
Query: 490 AQTVTTAPVSSPIPSTQSVAHD 555
+ + V PI +T S D
Sbjct: 1789 GRNIAPVEVDIPISTTSSTRKD 1810
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 32.3 bits (70), Expect = 0.32
Identities = 12/35 (34%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +2
Query: 275 VGKGDGQR-EFSGLGNCISKIFKSDGLIGLYRGFG 376
V K G + + GLG+C+ +++++ GL G+++G G
Sbjct: 190 VQKESGTKARYQGLGDCLLQVYRTGGLRGVFKGLG 224
>SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 32.3 bits (70), Expect = 0.32
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 24 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 137
+P+E +L W G ++VI F A+N F+D+YK++
Sbjct: 139 LPREVYVLYTWLGTLSSVINPFIYGAMNPVFRDEYKKL 176
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 31.5 bits (68), Expect = 0.57
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +2
Query: 302 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTAR 439
+ G+ +C + +FK +G+ YR + + I ++ +F Y+ AR
Sbjct: 32 YRGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPFQTLHFTVYEYAR 77
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 3 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF--LGGVDKKT 164
++ + KE+G+ +F+R + P Q L+F + ++ LGG D KT
Sbjct: 35 VIHCATSVFKEEGIRAFYRSYTTQLSMNIPFQTLHFTVYEYARKALNPLGGYDPKT 90
>SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05)
Length = 383
Score = 31.5 bits (68), Expect = 0.57
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 317 NCISKIFKSDGLIGLYRGFGVSVQGIIIY 403
+C I++ +G+ G YRGFG + ++Y
Sbjct: 332 DCFRTIYQQEGIFGFYRGFGALLIQCVVY 360
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 31.1 bits (67), Expect = 0.75
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +2
Query: 302 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 430
+ G +C+ K+++S GL G ++G V+ I A YFG Y+
Sbjct: 75 YRGPVDCLVKLYRSRGLAGCFQGNTVTAVRDIPGFAVYFGVYE 117
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 224 SVLRVPPRLRSTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 370
SV P + TRL + + G+ ++G+ +C KI+ ++GL Y+G
Sbjct: 220 SVAVNPLDVIKTRLQL-LNRPQGEPNYNGIIDCAKKIYSNEGLAAFYKG 267
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = +2
Query: 239 PPRLRSTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYF 418
P L TR+ + ++ + +C K+ +++G IGLYRG + G+ +A
Sbjct: 933 PIDLVKTRMQNQRAVLEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLLGVSPEKAIKL 992
Query: 419 GFYDTARG 442
D RG
Sbjct: 993 TTNDFVRG 1000
>SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -1
Query: 279 PTSAARRVLRSRGGTRSTERWLRRHHRRPDYQRSNARTAS-SC 154
P + R RS+ +R++ RWL R R+P S+ R++S SC
Sbjct: 4 PCNNNRDNTRSQVRSRNSNRWLLRQQRQPQRHLSHKRSSSNSC 46
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1
Query: 186 QRSNARTASSCQRRRGTPACTCP 118
Q + R S CQRRRG C CP
Sbjct: 934 QLVSCRFYSKCQRRRGGAQCVCP 956
>SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26)
Length = 205
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/79 (27%), Positives = 35/79 (44%)
Frame = +2
Query: 194 GLRWCRRSHLSVLRVPPRLRSTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 373
G+ C +H +V VP L R+ D +++ + N K DG+ GL RG+
Sbjct: 62 GILSCGLTHTAV--VPLDLVKCRIQVD------PKKYGSMVNGFKITLKEDGVRGLARGW 113
Query: 374 GVSVQGIIIYRASYFGFYD 430
+ G + FGFY+
Sbjct: 114 APTFIGYSMQGLGKFGFYE 132
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 29.1 bits (62), Expect = 3.0
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Frame = +2
Query: 230 LRVPPRLRSTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQ----GII 397
+ VP + S +L G+GD + + G I + F G G Y+G+ S+
Sbjct: 122 ITVPVDIISQKLMIQ-GQGDRKVKLKGARILIRETFHQHGPGGFYKGYFASLMTYAPSSA 180
Query: 398 IYRASYFGFYDTARGCCPTLRTHPL*SAGPS 490
I+ ASY GFY G TH L G S
Sbjct: 181 IWWASY-GFYTGVIGNLSADGTHRLLVLGSS 210
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 302 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 430
+ G +C+ K K G++GLYRG + G + + F ++
Sbjct: 79 YRGPIDCVKKTVKGHGVLGLYRGLSSLLYGSVPKASVRFAVFE 121
>SB_31266| Best HMM Match : PKI (HMM E-Value=1)
Length = 1507
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -1
Query: 399 MMIPCTDTPKPLYRPIRPSDLKILLMQ 319
+++PC P LYR +RP L+I + Q
Sbjct: 587 IILPCPSDPCSLYRELRPQALQIQMSQ 613
>SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 866
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 27 PKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 143
P+E L W G ++VI F +N F++++K+++L
Sbjct: 815 PRELYLFYSWLGALSSVINPFIYGVMNPMFREEFKRIYL 853
>SB_59800| Best HMM Match : SPRY (HMM E-Value=7.8e-05)
Length = 1444
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = -1
Query: 291 PSPLPTSAARRVLRSRGGTRSTERWLRRHHRRPDYQ 184
P P+ + ARR+L RG +++ W+ ++ P+Y+
Sbjct: 152 PRPVKSRCARRILEPRGSSKAWADWV-TENKGPNYK 186
>SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28)
Length = 343
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 24 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 140
+P+E L + G ++VI F A+N F+++YK+VF
Sbjct: 263 LPRELYFLYTYVGVLSSVINPFIYGAMNPMFREEYKKVF 301
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +2
Query: 275 VGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVS 382
+ K G + G +C+ +I++ G+ G+Y+G V+
Sbjct: 167 IEKAFGGSSYGGPVDCLRRIYREAGVRGVYKGISVT 202
>SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40)
Length = 368
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +3
Query: 24 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 137
+P+E +L + G ++VI F A+N FK++YK++
Sbjct: 267 LPREVYVLYSFLGGLSSVINPFIYGAMNPIFKEQYKKI 304
>SB_38893| Best HMM Match : UMPH-1 (HMM E-Value=2.3e-21)
Length = 372
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -3
Query: 595 LVQDIALGTTRLHHHALRTVSKG*EMIPALWLRSERWPS*LQ 470
L++ A G + HHH L +K ++I L L+ E P L+
Sbjct: 168 LIETEATGAPQKHHHTLNQWTKAHDLITELNLKKEDLPKILR 209
>SB_6969| Best HMM Match : Astacin (HMM E-Value=0)
Length = 225
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 308 GLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASY-FGFY 427
G C S + + G+ + GFG QG++++ + GFY
Sbjct: 88 GFSKCWSYVGRIGGMQKISIGFGCFTQGVVVHEIGHALGFY 128
>SB_52520| Best HMM Match : Fibrinogen_C (HMM E-Value=0)
Length = 344
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/70 (22%), Positives = 34/70 (48%)
Frame = +2
Query: 155 QEDAVLALLRW*SGLRWCRRSHLSVLRVPPRLRSTRLAADVGKGDGQREFSGLGNCISKI 334
+++ L++ W G R C ++ + P R + R A +G+R + GNC + +
Sbjct: 58 EDEKCLSVNYW-KGERKCDLNNATKAMYPEREKKDRTAIYANIREGERSIAVAGNC-ADV 115
Query: 335 FKSDGLIGLY 364
++ G G++
Sbjct: 116 LRAGGKSGVH 125
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 249 FAVPVSPPMSVRAMASVNSPVSETASA 329
F VPV P+ VR ++SPV T SA
Sbjct: 225 FRVPVRVPVPVRVPVPIHSPVYPTESA 251
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -1
Query: 252 RSRGGTRSTERWLRRHHR-RPDYQRSNARTASSCQRRRGTP 133
R +GG R+T+ ++H R +PD +R+ R R+GTP
Sbjct: 872 RHKGGNRATQEREKKHRRNQPDKRRTQMRIP-----RKGTP 907
>SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039)
Length = 54
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +3
Query: 3 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 137
+V + G +RGN A ++R P ++ F ++YK++
Sbjct: 2 VVHVLTQTYTTNGFTGLFRGNSATMMRVVPYASIQFTSHEQYKKL 46
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,639,152
Number of Sequences: 59808
Number of extensions: 407910
Number of successful extensions: 1431
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1428
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1524174750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -