Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0341
         (822 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    26   0.42 
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   5.1  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   5.1  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   6.8  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    22   6.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   6.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   6.8  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   6.8  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   6.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.9  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 25.8 bits (54), Expect = 0.42
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = -2

Query: 173 LTLAFYNTQHLNFQWKNICDFIVTKTFLSYSFCILQLREF 54
           LT   YN  +  + W N+C   ++   + ++F   +L +F
Sbjct: 43  LTNLTYNNTNRKYYWLNVCCLNLSIVTIFFNFATKKLEQF 82


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = -2

Query: 167 LAFYNTQHLNFQWKNICDFIV 105
           L  +  + L+  W+ +C F+V
Sbjct: 154 LTLFIKEELDLVWREVCTFVV 174


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 73  FCNYASFDEVTTDHVD 26
           +CNY+++   +  HVD
Sbjct: 147 WCNYSAYSSASRHHVD 162


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 82  HFAFCNYASFDEVTTDHVDLLITTRAR 2
           H++    ASF  + TD+V  LI T AR
Sbjct: 238 HYSIKKLASFQGIGTDNV-YLIRTDAR 263


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +1

Query: 256 QTEDERDLEYAFFGIYDGHGGSEXQRSPKN 345
           QTE + D    FF  + G+   E    P+N
Sbjct: 18  QTEAKTDKILCFFASWAGYRNGEGSFKPQN 47


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 14/46 (30%), Positives = 19/46 (41%)
 Frame = -3

Query: 649 SITHRGYQNR*EKKLYSTFFLVTKYDCRIADMSNIYFSSSNKSHTG 512
           S  +R   N  +KK YST+   T +D  I +        S K   G
Sbjct: 406 SSDNRILNNLLDKKPYSTYKFPTNFDALIVNEMRSEKPESKKDKKG 451


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 14/46 (30%), Positives = 19/46 (41%)
 Frame = -3

Query: 649 SITHRGYQNR*EKKLYSTFFLVTKYDCRIADMSNIYFSSSNKSHTG 512
           S  +R   N  +KK YST+   T +D  I +        S K   G
Sbjct: 298 SSDNRILNNLLDKKPYSTYKFPTNFDALIVNEMRSEKPESKKDKKG 343


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 274 PAHPQFVISNG 242
           P+HP  VISNG
Sbjct: 124 PSHPYTVISNG 134


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 428 YADPLEHVERARKMA*DSDR 487
           Y D ++H+ER R+   D DR
Sbjct: 170 YEDIVKHLERLREERCDPDR 189


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 110  IVTKTFLSYSFCILQLREFRRSDDRSR 30
            I+TKT L +  C   + E    + RSR
Sbjct: 1313 IITKTQLDFDLCSKPIDEMTVDELRSR 1339


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 110  IVTKTFLSYSFCILQLREFRRSDDRSR 30
            I+TKT L +  C   + E    + RSR
Sbjct: 1313 IITKTQLDFDLCSKPIDEMTVDELRSR 1339


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,232
Number of Sequences: 336
Number of extensions: 4190
Number of successful extensions: 18
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22517873
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)