Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0341
(822 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0550 - 23795957-23796154,23796596-23796650,23797324-237973... 32 0.48
12_01_0616 - 5076126-5076371,5077386-5077613,5079356-5079859 31 0.84
02_04_0496 + 23446039-23446964,23452755-23452845,23452946-234529... 31 0.84
02_04_0489 + 23404757-23404812,23406170-23406296,23406418-234064... 31 0.84
02_04_0485 + 23338980-23339187,23339277-23339305,23339962-233400... 31 0.84
02_04_0482 + 23291986-23292181,23292289-23292317,23293500-232936... 31 0.84
04_04_0406 + 24978845-24978970,24979073-24979142,24979541-249795... 31 1.1
02_04_0555 - 23840634-23841035,23841388-23841501,23841742-238418... 31 1.1
02_04_0491 + 23417790-23417859,23418550-23418773,23418951-234189... 31 1.1
04_04_0932 - 29488626-29488877,29488965-29489201,29489578-294899... 30 1.9
01_07_0376 - 43156672-43156902,43157505-43157741,43157934-431582... 30 1.9
05_03_0674 - 16842301-16842320,16842651-16842714,16842843-168429... 30 2.6
01_06_0121 + 26646288-26647025,26648466-26648494,26649387-266494... 30 2.6
01_05_0107 + 18172644-18172974,18173162-18173985 30 2.6
07_03_1487 - 26911652-26911989,26912114-26912201,26912559-26913470 29 3.4
03_02_0645 + 10133658-10134140,10134280-10134627,10134787-10135131 29 3.4
02_01_0598 + 4440018-4440070,4440627-4440693,4440794-4440926,444... 29 3.4
01_05_0482 + 22614097-22614729,22614859-22615182,22615291-226153... 29 3.4
11_02_0029 + 7533705-7534193,7535532-7535729,7536998-7537168,753... 29 4.5
09_06_0254 - 21872694-21872873,21872992-21873046,21873548-218736... 29 5.9
09_04_0666 + 19318512-19318578,19319185-19319273,19321344-193221... 29 5.9
05_07_0292 - 29023935-29024102,29024974-29025048,29025147-290252... 29 5.9
03_01_0263 + 2038139-2038445,2038610-2038618,2038759-2039126,203... 29 5.9
10_08_0792 + 20607028-20607054,20608081-20608278,20608834-206090... 28 7.8
06_03_0954 - 26281937-26282143,26282232-26282286,26282430-262824... 28 7.8
02_05_0339 - 28094581-28094817,28095011-28096381,28097713-280979... 28 7.8
>02_04_0550 -
23795957-23796154,23796596-23796650,23797324-23797376,
23797453-23797529,23797613-23797736,23797848-23797964,
23798439-23798547,23798724-23798829,23799043-23799106,
23799214-23799333
Length = 340
Score = 32.3 bits (70), Expect = 0.48
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 262 EDERDLEYAFFGIYDGHGGSE 324
E + D +FFG+YDGHGG+E
Sbjct: 44 ELDLDATTSFFGVYDGHGGAE 64
>12_01_0616 - 5076126-5076371,5077386-5077613,5079356-5079859
Length = 325
Score = 31.5 bits (68), Expect = 0.84
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +2
Query: 404 SKSHQKWLYADPLEHVERARKMA*DSDRLAKHSRH--TASVAFIRRGKIYVGHVGDSAII 577
S S Q+ D + RA + DS+ L++ R A+ A ++ G++YV +VGD +
Sbjct: 214 SPSQQRREEEDDVTAAIRAAYLTTDSEFLSQGVRGGACAATALVKDGELYVSNVGDCRAV 273
Query: 578 LG 583
LG
Sbjct: 274 LG 275
Score = 29.1 bits (62), Expect = 4.5
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +1
Query: 280 EYAFFGIYDGHGG 318
+ AF+G+YDGHGG
Sbjct: 167 QLAFYGVYDGHGG 179
>02_04_0496 +
23446039-23446964,23452755-23452845,23452946-23452996,
23453080-23453206,23453390-23453425,23453443-23453473,
23453488-23453576,23454341-23454462,23455601-23455778,
23458343-23458470,23458592-23458658,23459167-23459272,
23459365-23459473,23459965-23460084,23460187-23460220,
23460471-23460547,23460640-23460692,23460847-23460898,
23461270-23461767
Length = 964
Score = 31.5 bits (68), Expect = 0.84
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 274 DLEYAFFGIYDGHGGSE 324
D +FFG+YDGHGG+E
Sbjct: 602 DTMTSFFGVYDGHGGAE 618
>02_04_0489 +
23404757-23404812,23406170-23406296,23406418-23406487,
23406997-23407102,23407185-23407296,23407792-23407914,
23408017-23408176,23408300-23408376,23408474-23408526,
23408700-23408754,23409049-23409683,23410412-23410733,
23410838-23411146,23411468-23411470
Length = 735
Score = 31.5 bits (68), Expect = 0.84
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +2
Query: 509 TASVAFIRRGKIYVGHVGDSAIILGYQKEGTIKLFF 616
TA V IR ++ VGHVGDS +L Q I L F
Sbjct: 169 TACVVVIRGNQMIVGHVGDSRCVLSRQGGLAIDLSF 204
Score = 31.1 bits (67), Expect = 1.1
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = +1
Query: 286 AFFGIYDGHGGSE 324
+FFG+YDGHGG+E
Sbjct: 75 SFFGVYDGHGGAE 87
>02_04_0485 + 23338980-23339187,23339277-23339305,23339962-23340064,
23340311-23340482,23340880-23340940,23341257-23341389,
23341938-23342208,23342595-23342734,23342912-23342998,
23343078-23343586,23343671-23344488,23344522-23344720,
23345552-23345696,23345728-23345782,23347652-23347778,
23347867-23347936,23348448-23348553,23348636-23348747,
23349243-23349365,23349468-23349627,23349751-23349827,
23349925-23349977,23350151-23350205,23350500-23351174
Length = 1495
Score = 31.5 bits (68), Expect = 0.84
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +2
Query: 509 TASVAFIRRGKIYVGHVGDSAIILGYQKEGTIKLFF 616
TA V IR ++ VGHVGDS +L Q I L F
Sbjct: 1127 TACVVVIRGNQMIVGHVGDSRCVLSRQGGLAIDLSF 1162
Score = 31.1 bits (67), Expect = 1.1
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = +1
Query: 286 AFFGIYDGHGGSE 324
+FFG+YDGHGG+E
Sbjct: 1033 SFFGVYDGHGGAE 1045
>02_04_0482 + 23291986-23292181,23292289-23292317,23293500-23293602,
23293855-23293979,23294788-23294920,23295468-23295739,
23295806-23295873,23296126-23296265,23296443-23296529,
23296610-23297118,23297203-23298020,23298054-23298252,
23299084-23299228,23299260-23299314,23301184-23301310,
23301399-23301468,23301980-23302085,23302168-23302279,
23302775-23302897,23303000-23303159,23303283-23303359,
23303457-23303509,23303683-23303737,23304032-23304706
Length = 1478
Score = 31.5 bits (68), Expect = 0.84
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +2
Query: 509 TASVAFIRRGKIYVGHVGDSAIILGYQKEGTIKLFF 616
TA V IR ++ VGHVGDS +L Q I L F
Sbjct: 1110 TACVVVIRGNQMIVGHVGDSRCVLSRQGGLAIDLSF 1145
Score = 31.1 bits (67), Expect = 1.1
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = +1
Query: 286 AFFGIYDGHGGSE 324
+FFG+YDGHGG+E
Sbjct: 1016 SFFGVYDGHGGAE 1028
>04_04_0406 +
24978845-24978970,24979073-24979142,24979541-24979556,
24979813-24979930,24980015-24980137,24980249-24980408,
24980470-24980546,24980635-24980687,24981263-24981317,
24981664-24981858
Length = 330
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 286 AFFGIYDGHGGSEXQR 333
+FFG+YDGHGGS R
Sbjct: 56 SFFGVYDGHGGSAVAR 71
>02_04_0555 -
23840634-23841035,23841388-23841501,23841742-23841844,
23842415-23842467,23842544-23842644,23842702-23842879,
23842998-23843120,23843515-23843656,23843854-23843959,
23844236-23844305,23844430-23844588,23845229-23845329,
23845410-23845503
Length = 581
Score = 31.1 bits (67), Expect = 1.1
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = +1
Query: 286 AFFGIYDGHGGSE 324
+FFG+YDGHGG+E
Sbjct: 132 SFFGVYDGHGGAE 144
>02_04_0491 +
23417790-23417859,23418550-23418773,23418951-23418964,
23419842-23419968,23420092-23420161,23420661-23420766,
23420849-23420966,23421457-23421576,23421679-23421859,
23421954-23422030,23422117-23422169,23422336-23422387,
23422683-23423885
Length = 804
Score = 31.1 bits (67), Expect = 1.1
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = +1
Query: 286 AFFGIYDGHGGSE 324
+FFG+YDGHGG+E
Sbjct: 159 SFFGVYDGHGGAE 171
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 509 TASVAFIRRGKIYVGHVGDSAIILGYQ 589
TA V IR ++ VGH GDS +L Q
Sbjct: 254 TACVVVIRGDQMIVGHAGDSRCVLSRQ 280
>04_04_0932 -
29488626-29488877,29488965-29489201,29489578-29489942,
29490825-29491137
Length = 388
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 289 FFGIYDGHGGSEXQRSPKN 345
F G+YDGHGG+E R N
Sbjct: 79 FIGVYDGHGGAEASRFISN 97
>01_07_0376 -
43156672-43156902,43157505-43157741,43157934-43158295,
43158370-43158670
Length = 376
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 518 VAFIRRGKIYVGHVGDSAIILGYQKEGTIK 607
V I G +YV + GDS +LG + G IK
Sbjct: 148 VGIINEGVLYVANTGDSRAVLGRLERGVIK 177
>05_03_0674 -
16842301-16842320,16842651-16842714,16842843-16842983,
16843382-16843515,16844437-16844501,16844886-16844923,
16845029-16845148,16846129-16846458
Length = 303
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -3
Query: 595 FFLVTKYDCRIADMSNIYFSSSNK-SHTGCVPAVLGKPVTVLGHFSSSFHMF 443
F+ + +YDCR D + + S + G V + V +L H SSSF F
Sbjct: 96 FYWIREYDCRFPDAEDEHQEQSKELGRPGAVVSNHVSYVDILYHMSSSFPSF 147
>01_06_0121 +
26646288-26647025,26648466-26648494,26649387-26649434,
26650398-26650558,26650945-26651268,26651703-26651854
Length = 483
Score = 29.9 bits (64), Expect = 2.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 262 EDERDLEYAFFGIYDGHGGS 321
E+ ++ + FF +YDGHGGS
Sbjct: 118 EEGKEEDEGFFAVYDGHGGS 137
>01_05_0107 + 18172644-18172974,18173162-18173985
Length = 384
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 131 WKNICDFIVTKTFLSYSFCILQLREFRRSDDRSRG 27
W C FI+T++ LS S C+ L + + D RG
Sbjct: 292 WYLYCSFIITRSELSGSICVAMLNACKANMDVLRG 326
>07_03_1487 - 26911652-26911989,26912114-26912201,26912559-26913470
Length = 445
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 509 TASVAFIRRGKIYVGHVGDSAIILGYQKEGTI 604
TA A + G ++V +VGDS + G +EG +
Sbjct: 156 TAVAALVAGGALHVANVGDSRAVAGVWREGRV 187
>03_02_0645 + 10133658-10134140,10134280-10134627,10134787-10135131
Length = 391
Score = 29.5 bits (63), Expect = 3.4
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 274 DLEYAFFGIYDGHGG 318
D + AFFG++DGHGG
Sbjct: 158 DPKVAFFGVFDGHGG 172
>02_01_0598 + 4440018-4440070,4440627-4440693,4440794-4440926,
4441075-4441120,4442470-4442521,4442601-4442753,
4443338-4443457,4443549-4443714,4443822-4443934,
4444049-4444120,4444992-4445213,4445270-4445317,
4445639-4445697,4445809-4445887,4445982-4446119,
4446327-4446551,4446643-4447430,4447548-4447723,
4447911-4448169,4448646-4448707,4451055-4451212,
4451618-4451743,4452197-4452260,4452386-4452494,
4452607-4452760,4453055-4453178,4453257-4453333,
4453442-4453494,4453673-4453727,4453833-4454021
Length = 1379
Score = 29.5 bits (63), Expect = 3.4
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 274 DLEYAFFGIYDGHGG 318
D E +FFG++DGHGG
Sbjct: 1113 DNETSFFGVFDGHGG 1127
>01_05_0482 +
22614097-22614729,22614859-22615182,22615291-22615396,
22615628-22615668
Length = 367
Score = 29.5 bits (63), Expect = 3.4
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = +1
Query: 289 FFGIYDGHGGSE 324
FFG+YDGHGG++
Sbjct: 200 FFGVYDGHGGAQ 211
>11_02_0029 +
7533705-7534193,7535532-7535729,7536998-7537168,
7537274-7537609
Length = 397
Score = 29.1 bits (62), Expect = 4.5
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +1
Query: 280 EYAFFGIYDGHGG 318
+ AF+G+YDGHGG
Sbjct: 162 QMAFYGVYDGHGG 174
>09_06_0254 -
21872694-21872873,21872992-21873046,21873548-21873600,
21873683-21873759,21873842-21873965,21874050-21874175,
21874861-21875011,21875112-21875220,21875791-21875854,
21876334-21876450
Length = 351
Score = 28.7 bits (61), Expect = 5.9
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +1
Query: 286 AFFGIYDGHGG 318
+FFG+YDGHGG
Sbjct: 51 SFFGVYDGHGG 61
>09_04_0666 +
19318512-19318578,19319185-19319273,19321344-19322171,
19322264-19322419,19322507-19322881
Length = 504
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 240 NKSSMYFLPPWLQCPVTRKLTPIDAGIL*HTT 145
N S+ Y+L WLQ VT + + GIL + T
Sbjct: 126 NASTSYYLDSWLQIAVTPLIEELTLGILSYNT 157
>05_07_0292 -
29023935-29024102,29024974-29025048,29025147-29025238,
29025257-29025319,29025418-29025504,29025625-29025783,
29025876-29025974,29026048-29026175,29027766-29028433
Length = 512
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 274 DLEYAFFGIYDGHGGS 321
D + + FGI+DGHGGS
Sbjct: 255 DKQISLFGIFDGHGGS 270
>03_01_0263 +
2038139-2038445,2038610-2038618,2038759-2039126,
2039724-2039960,2040140-2040412
Length = 397
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 289 FFGIYDGHGGSEXQR 333
F G+YDGHGG E R
Sbjct: 77 FIGVYDGHGGPETAR 91
>10_08_0792 +
20607028-20607054,20608081-20608278,20608834-20609039,
20610081-20610639
Length = 329
Score = 28.3 bits (60), Expect = 7.8
Identities = 8/13 (61%), Positives = 13/13 (100%)
Frame = +1
Query: 286 AFFGIYDGHGGSE 324
AF+G++DGHGG++
Sbjct: 72 AFYGVFDGHGGTD 84
>06_03_0954 -
26281937-26282143,26282232-26282286,26282430-26282482,
26282587-26282663,26282734-26282857,26282947-26283072,
26283463-26283616,26283709-26283817,26283911-26283974,
26284782-26284898
Length = 361
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +1
Query: 274 DLEYAFFGIYDGHGG 318
D + +FFG++DGHGG
Sbjct: 47 DNDTSFFGVFDGHGG 61
>02_05_0339 -
28094581-28094817,28095011-28096381,28097713-28097922,
28098047-28098283,28098677-28099041,28099661-28099970
Length = 909
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 518 VAFIRRGKIYVGHVGDSAIILGY 586
V I RG +YV ++GDS ++GY
Sbjct: 151 VGIIWRGVLYVANLGDSRAVVGY 173
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,498,793
Number of Sequences: 37544
Number of extensions: 415155
Number of successful extensions: 1087
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1087
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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