Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0341
         (822 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    26   1.2  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    26   1.2  
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        25   2.1  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   4.9  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   6.5  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   8.6  

>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = -3

Query: 646 ITHRGYQNR*EKKLYSTFFLVTKYDCRIADMSNIYFSS 533
           +TH  Y +R +++LY+TF LV  +   +  +   Y S+
Sbjct: 335 VTHGFYTDRWQEQLYTTFTLVFMFIIPLLILIGTYLST 372


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = -3

Query: 646 ITHRGYQNR*EKKLYSTFFLVTKYDCRIADMSNIYFSS 533
           +TH  Y +R +++LY+TF LV  +   +  +   Y S+
Sbjct: 336 VTHGFYTDRWQEQLYTTFTLVFMFIIPLLILIGTYLST 373


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1

Query: 408 LEHPRRCPTRIVAVLQLNPLGVLW 337
           L HP R P    A  +LNP+ VL+
Sbjct: 395 LMHPTRVPKPCCAPTKLNPISVLY 418


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 512 LCACCAWQACHC 477
           LC CC + AC C
Sbjct: 779 LCHCCEFDACDC 790


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +2

Query: 317 AAXSSVRQRTPNGFNCKTATILVGQRRG 400
           AA +    ++P+ F+C +  + VGQ +G
Sbjct: 471 AAANPEIAKSPSDFSCHSYELFVGQEKG 498


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 512 LCACCAWQACHC 477
           LC CC + AC C
Sbjct: 743 LCHCCDFYACDC 754


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 819,297
Number of Sequences: 2352
Number of extensions: 15713
Number of successful extensions: 39
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87318630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)