Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0341
         (822 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    28   0.12 
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    25   0.85 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    24   2.0  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   6.0  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              22   7.9  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              22   7.9  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   7.9  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 27.9 bits (59), Expect = 0.12
 Identities = 9/22 (40%), Positives = 17/22 (77%)
 Frame = +3

Query: 369 QRQFWSDNDEDVLKAIRNGYML 434
           +R +W+ +++DV+K+I  GY L
Sbjct: 836 ERPYWNWSNQDVIKSIEKGYRL 857


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 25.0 bits (52), Expect = 0.85
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 812 FXIFXSKNLHYRILKPGNIIKDQK 741
           F    S+N+ YR LKP N++ D +
Sbjct: 479 FDYLHSRNIIYRDLKPENLLLDSQ 502


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 512 LCACCAWQACHC 477
           LC CC + AC C
Sbjct: 746 LCHCCDFDACDC 757


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -2

Query: 125 NICDFIVTKTFLSYSFCILQLREFRRS 45
           N+ D   TKTF    +C+  L+E  ++
Sbjct: 447 NVTDGETTKTFCCKGYCMDLLKELSKT 473


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
 Frame = +2

Query: 584 YQKEGTIKLFFSPILVTSMG--YTRFNELVNC 673
           Y  E  IK   +   V S    Y RFN+LV C
Sbjct: 91  YLDENVIKKLVAECSVISDANIYIRFNKLVKC 122


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
 Frame = +2

Query: 584 YQKEGTIKLFFSPILVTSMG--YTRFNELVNC 673
           Y  E  IK   +   V S    Y RFN+LV C
Sbjct: 91  YLDENVIKKLVAECSVISDANIYIRFNKLVKC 122


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 158 YNTQHLNFQWKN 123
           YN    NFQWK+
Sbjct: 226 YNINGFNFQWKD 237


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,011
Number of Sequences: 438
Number of extensions: 4677
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26217432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)