Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0340
         (597 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   4.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   4.5  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   4.5  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   4.5  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   4.5  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   6.0  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   7.9  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = +3

Query: 18  TNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTSYA 128
           + + ++ + I+D V+++D   A     T   +M +YA
Sbjct: 245 SKLPKSMLAISDPVFIVDQVAALHIKLTDTAHMINYA 281


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 21  NIAETSITINDVVYVIDS 74
           NI   ++T+NDVV++  S
Sbjct: 77  NILMKNVTLNDVVFIFCS 94


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 439 GPEWRERVLGVQTAQLAEQ 383
           GPE+RER+L V  + + ++
Sbjct: 341 GPEFRERLLNVNLSAVDQK 359


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = +3

Query: 18  TNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTSYA 128
           + + ++ + I+D V+++D   A     T   +M +YA
Sbjct: 245 SKLPKSMLAISDPVFIVDQVAALHIKLTDTAHMINYA 281


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 439 GPEWRERVLGVQTAQLAEQ 383
           GPE+RER+L V  + + ++
Sbjct: 341 GPEFRERLLNVNLSAVDQK 359


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 5/8 (62%), Positives = 8/8 (100%)
 Frame = -1

Query: 150 WSYSPIRW 127
           W+++PIRW
Sbjct: 260 WAFAPIRW 267


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 11/31 (35%), Positives = 12/31 (38%)
 Frame = +1

Query: 301 PPPGCDRSLPVEXXGAPAAGRCHRGGGSAPR 393
           P  GC R+      G P  GR    G   PR
Sbjct: 53  PRWGCARASSATTMGGPRYGRAAAQGMPYPR 83


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,226
Number of Sequences: 336
Number of extensions: 2294
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)