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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0340
         (597 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_38249| Best HMM Match : HA2 (HMM E-Value=1.6e-26)                  111   4e-25
SB_44906| Best HMM Match : No HMM Matches (HMM E-Value=.)              52   3e-07
SB_49454| Best HMM Match : No HMM Matches (HMM E-Value=.)              50   1e-06
SB_27922| Best HMM Match : No HMM Matches (HMM E-Value=.)              50   1e-06
SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.)              46   2e-05
SB_54154| Best HMM Match : HA2 (HMM E-Value=3.5e-22)                   46   2e-05
SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14)            46   3e-05
SB_37839| Best HMM Match : HA2 (HMM E-Value=4e-21)                     45   4e-05
SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16)                      44   9e-05
SB_47261| Best HMM Match : HA2 (HMM E-Value=5.8e-16)                   42   5e-04
SB_8770| Best HMM Match : No HMM Matches (HMM E-Value=.)               40   0.001
SB_33763| Best HMM Match : RVT_1 (HMM E-Value=3.1e-17)                 38   0.006
SB_6014| Best HMM Match : No HMM Matches (HMM E-Value=.)               35   0.057
SB_12766| Best HMM Match : Helicase_C (HMM E-Value=5.8e-09)            32   0.40 
SB_15794| Best HMM Match : DUF1605 (HMM E-Value=5.9e-12)               31   0.93 
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.6  
SB_56219| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.9  
SB_50927| Best HMM Match : DEAD (HMM E-Value=3.2e-06)                  28   6.6  
SB_9655| Best HMM Match : VWA (HMM E-Value=0.00019)                    28   6.6  

>SB_38249| Best HMM Match : HA2 (HMM E-Value=1.6e-26)
          Length = 355

 Score =  111 bits (267), Expect = 4e-25
 Identities = 54/87 (62%), Positives = 65/87 (74%)
 Frame = +3

Query: 3   KVILSTNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTSYATVWASKTNLEQXXXXXXX 182
           K+ILSTNIAETSITI+DVV+VIDS KAK+KLFTSHNNMT+YATVWAS+TN+EQ       
Sbjct: 102 KIILSTNIAETSITIDDVVFVIDSVKAKVKLFTSHNNMTNYATVWASQTNMEQRRGRAGR 161

Query: 183 XXXXXCFTLCTYARYEKLEEHLAAKCL 263
                 F LC+ AR ++L EH   + L
Sbjct: 162 VRPGFAFHLCSRARADRLAEHATPEIL 188



 Score =  108 bits (260), Expect = 3e-24
 Identities = 50/82 (60%), Positives = 66/82 (80%)
 Frame = +2

Query: 254 QMFRTPLHELALSIKLLRLGAIGHFLSXXXEPPPLDAVIEAEXLLRELGCLDAEDALTPL 433
           ++ RTPLHELAL+IKLL+LG I  FL+   EPPPLDAV+E+  +L+++  LD  + LTPL
Sbjct: 186 EILRTPLHELALTIKLLKLGDITAFLNNAIEPPPLDAVVESVAMLKDMEALDTNENLTPL 245

Query: 434 GTILAKLPIEPRLGKMMVLGFV 499
           G +LAKLPIEPRLGKM++LG +
Sbjct: 246 GYMLAKLPIEPRLGKMVILGCI 267


>SB_44906| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 871

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
 Frame = +3

Query: 3   KVILSTNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTSYATVWASKTNLEQXXXXXXX 182
           +VIL+TNIAETS+TI+ ++YVID    K K +     M S      SK +  Q       
Sbjct: 312 QVILATNIAETSLTIDGIIYVIDPGFCKQKSYNPRTGMESLVVTPISKASANQRAGRAGR 371

Query: 183 XXXXXCFTLCT-YARYEKLEEH 245
                CF L T +A   +LEE+
Sbjct: 372 VNAGKCFRLYTAWAYNNELEEN 393


>SB_49454| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 696

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 31/80 (38%), Positives = 38/80 (47%)
 Frame = +3

Query: 3   KVILSTNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTSYATVWASKTNLEQXXXXXXX 182
           KVILSTNIAETS+TI  V YVID+   K K F     +        SK    Q       
Sbjct: 333 KVILSTNIAETSVTIPGVKYVIDTGYVKAKGFHPKTGLDMLRVQPVSKAQARQRLGRAGR 392

Query: 183 XXXXXCFTLCTYARYEKLEE 242
                C+ L T  ++E+L E
Sbjct: 393 ECSGVCYRLYTEEQFEQLAE 412



 Score = 35.1 bits (77), Expect = 0.043
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
 Frame = +2

Query: 263 RTPLHELALSIKLLRLGAIGHF-LSXXXEPPPLDAVIEAEXLLRELGCLDAEDALTPLGT 439
           R  L  + L +  L +  I  F          +D  ++   +L  L  ++ +  LT LG 
Sbjct: 420 RCNLSSVILQLMALGIADIASFDFMDKPSADAIDGALKQLVILEALQEINGDYKLTSLGQ 479

Query: 440 ILAKLPIEPRLGKMMVLGFVLG 505
            +A+ P+EPRL K+++    LG
Sbjct: 480 KMAQFPLEPRLAKVILASETLG 501


>SB_27922| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1704

 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 10/87 (11%)
 Frame = +2

Query: 254 QMFRTPLHELALSIKLLRLGAIGHFLSXXXEPPPLDAVIEAEXLLRELGCLDA------- 412
           ++ R PL ++ L +KLL LGA    LS   +PP ++ +     LL+++G L         
Sbjct: 331 ELQRCPLEQVVLQVKLLDLGAPKAILSLALQPPDIEDIERTVLLLKQVGALSTIMKGRRI 390

Query: 413 ---EDALTPLGTILAKLPIEPRLGKMM 484
              +  LT +G +L  LP++ R+GK+M
Sbjct: 391 DPYDGELTFIGKVLGTLPVDVRIGKLM 417


>SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1168

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 20/71 (28%), Positives = 37/71 (52%)
 Frame = +3

Query: 9   ILSTNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTSYATVWASKTNLEQXXXXXXXXX 188
           +++TN+AETS+TI ++ YV+D+   K + +     ++S+   W SK +  Q         
Sbjct: 626 VVATNVAETSLTIPNIKYVVDTGMVKRRYYDKVTGVSSFRITWTSKASANQRAGRAGRVE 685

Query: 189 XXXCFTLCTYA 221
              C+ L + A
Sbjct: 686 PGHCYRLYSSA 696



 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
 Frame = +2

Query: 263 RTPLHELALSIKLLRLGAIGHFLSXXXEPPPLDAVIEAEXLLRELGCLDAEDA------- 421
           R P+ +L L +K + +  + +F      PP   A+  AE LL +LG L+           
Sbjct: 712 RCPVDDLVLQMKSMNIDKVVNF--PFPTPPSSSALETAEKLLLDLGALEERKTVKGNISA 769

Query: 422 -LTPLGTILAKLPIEPRLGKMMVLG 493
            ++PLG+ +AK P+ PR  KM+ LG
Sbjct: 770 VISPLGSAMAKFPVLPRYAKMLCLG 794


>SB_54154| Best HMM Match : HA2 (HMM E-Value=3.5e-22)
          Length = 354

 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 20/31 (64%), Positives = 27/31 (87%)
 Frame = +3

Query: 3   KVILSTNIAETSITINDVVYVIDSCKAKMKL 95
           K++++TNIAETSITI+DVV+V+D  K K KL
Sbjct: 211 KIVIATNIAETSITIDDVVFVVDCGKVKEKL 241



 Score = 44.8 bits (101), Expect = 5e-05
 Identities = 20/47 (42%), Positives = 30/47 (63%)
 Frame = +2

Query: 377 EXLLRELGCLDAEDALTPLGTILAKLPIEPRLGKMMVLGFVLGVETP 517
           E  L+    LD ++ LTPLG  LA LP++PR+GKM++ G ++    P
Sbjct: 261 ELCLQIKNALDTKENLTPLGYHLASLPVDPRIGKMILFGAIVSCLDP 307


>SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14)
          Length = 1197

 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 23/75 (30%), Positives = 38/75 (50%)
 Frame = +3

Query: 3    KVILSTNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTSYATVWASKTNLEQXXXXXXX 182
            K +++TNIAETS+T++ +++VID+   K+K++     M +      S+ N  Q       
Sbjct: 807  KCVVATNIAETSLTVDGIMFVIDAGYCKLKVYNPKIGMDALQVYPISQANANQRSGRAGR 866

Query: 183  XXXXXCFTLCTYARY 227
                 CF L T   Y
Sbjct: 867  TGPGQCFRLYTENSY 881



 Score = 31.9 bits (69), Expect = 0.40
 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
 Frame = +2

Query: 263  RTPLHELALSIKLLRLGAIGHFLSXXXEPPPLDAVIEAEXLLRELGCLDAEDALTPLG-- 436
            RT L  + L +K L +  +  F     +PPP + ++ +   L  LG LD   +LTPLG  
Sbjct: 895  RTNLANVVLLLKSLGVQNLLEF--HFMDPPPQENILNSMYQLWILGALDNTGSLTPLGRQ 952

Query: 437  -TILAKLPI 460
             TI++ L +
Sbjct: 953  MTIVSMLSV 961


>SB_37839| Best HMM Match : HA2 (HMM E-Value=4e-21)
          Length = 422

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 24/77 (31%), Positives = 40/77 (51%)
 Frame = +3

Query: 3   KVILSTNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTSYATVWASKTNLEQXXXXXXX 182
           K +++TNIAETS+TI+ VV+VID   +K K++     + S      S+ + +Q       
Sbjct: 156 KCVVATNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVSAISRASAQQRAGRAGR 215

Query: 183 XXXXXCFTLCTYARYEK 233
                CF L T   +++
Sbjct: 216 TRPGKCFRLYTEKAFQE 232


>SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16)
          Length = 2352

 Score = 44.0 bits (99), Expect = 9e-05
 Identities = 24/67 (35%), Positives = 39/67 (58%)
 Frame = +2

Query: 293  IKLLRLGAIGHFLSXXXEPPPLDAVIEAEXLLRELGCLDAEDALTPLGTILAKLPIEPRL 472
            +KL+ LG    F     E P  +++  A   L +LG +  + +LT LG  L+K+P+EPRL
Sbjct: 1058 VKLMDLGISDPFKFDYVEAPSKESINRAVASLVQLGAIK-DGSLTELGRKLSKVPLEPRL 1116

Query: 473  GKMMVLG 493
            G+++  G
Sbjct: 1117 GRLLFEG 1123



 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 24/80 (30%), Positives = 37/80 (46%)
 Frame = +3

Query: 3    KVILSTNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTSYATVWASKTNLEQXXXXXXX 182
            KV+ STN AETSITI  V +V+D+  AK   +     +        S+++ +Q       
Sbjct: 963  KVVFSTNCAETSITIPGVKFVVDTGMAKEMKYEEKRGLNILEVSVISRSSADQRKGRAGR 1022

Query: 183  XXXXXCFTLCTYARYEKLEE 242
                 C+ L T   Y  +E+
Sbjct: 1023 TDSGKCYRLYTEKDYTAMEK 1042


>SB_47261| Best HMM Match : HA2 (HMM E-Value=5.8e-16)
          Length = 351

 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 16/40 (40%), Positives = 29/40 (72%)
 Frame = +2

Query: 398 GCLDAEDALTPLGTILAKLPIEPRLGKMMVLGFVLGVETP 517
           G L  ++A+TP+G +L++LP++  +GKM+++G V  V  P
Sbjct: 122 GALTEDEAITPVGQMLSRLPVDVVIGKMLLMGSVFHVTDP 161


>SB_8770| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1303

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
 Frame = +2

Query: 350 PPLD----AVIEAEXLLRELGCLDAEDALTPLGTILAKLPIEPRLGKMMVLGFVLG 505
           PPL      +I A   L  L  LD E  LT LG  +A+ P+EP+L KM++    LG
Sbjct: 696 PPLSRRSSTMISAMEALHSLSALDNEGLLTRLGRRMAEFPLEPQLSKMLIQSVHLG 751


>SB_33763| Best HMM Match : RVT_1 (HMM E-Value=3.1e-17)
          Length = 271

 Score = 37.9 bits (84), Expect = 0.006
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = +2

Query: 422 LTPLGTILAKLPIEPRLGKMMVLGFVLG 505
           LT +G +L  LP++ R+GK+MVLG+V G
Sbjct: 234 LTFIGKVLGTLPVDVRIGKLMVLGYVFG 261


>SB_6014| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 36

 Score = 34.7 bits (76), Expect = 0.057
 Identities = 16/26 (61%), Positives = 21/26 (80%)
 Frame = +3

Query: 3  KVILSTNIAETSITINDVVYVIDSCK 80
          K I+STNIAETSITI+ + ++ DS K
Sbjct: 11 KCIVSTNIAETSITIDGIRFIADSGK 36


>SB_12766| Best HMM Match : Helicase_C (HMM E-Value=5.8e-09)
          Length = 185

 Score = 31.9 bits (69), Expect = 0.40
 Identities = 13/20 (65%), Positives = 18/20 (90%)
 Frame = +3

Query: 3   KVILSTNIAETSITINDVVY 62
           KVI++TN+AE SITI+ +VY
Sbjct: 132 KVIVATNVAEASITIDGIVY 151


>SB_15794| Best HMM Match : DUF1605 (HMM E-Value=5.9e-12)
          Length = 655

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = +2

Query: 443 LAKLPIEPRLGKMMVLGFVL 502
           LA LP+EPRLGKM++   VL
Sbjct: 87  LADLPVEPRLGKMILYSVVL 106


>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 732

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +1

Query: 349 PAAGRCHRGGGSAPRAGLSGRRGR 420
           PA  +  RGGG+ PR G  GR GR
Sbjct: 252 PANSKPSRGGGNTPRGGGRGRGGR 275


>SB_56219| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 252

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +2

Query: 272 LHELALSIKLLRLGAIGHFLSXXXEPPPLDAVIEAEXLL 388
           LHE++L +K+     + H +S   EPP + ++I +E  L
Sbjct: 24  LHEISLEMKVSHTANVLHGVSDTAEPPEIISLIRSEGSL 62


>SB_50927| Best HMM Match : DEAD (HMM E-Value=3.2e-06)
          Length = 368

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 15/45 (33%), Positives = 17/45 (37%)
 Frame = +3

Query: 96  FTSHNNMTSYATVWASKTNLEQXXXXXXXXXXXXCFTLCTYARYE 230
           + S   M S   VW S+ N  Q            CF L T  RYE
Sbjct: 314 YDSTKGMESLEEVWFSRANARQRRGRAGRVTSGVCFHLFTRNRYE 358


>SB_9655| Best HMM Match : VWA (HMM E-Value=0.00019)
          Length = 283

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
 Frame = +1

Query: 265 DSATRACFEHKAPPPGCDRSLPVEXXGAPAAGRCHRGGGSAPRAGLSGRR-GRAHATRDH 441
           D  +  CF+    P  C +S PVE   +       R G    R  ++GRR    HA    
Sbjct: 65  DGPSDKCFQQLIKPYTCVKSDPVETFTSTVDTPRGRDGQGVARPVVTGRRVASEHAPTPP 124

Query: 442 PR 447
           PR
Sbjct: 125 PR 126


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,668,934
Number of Sequences: 59808
Number of extensions: 327132
Number of successful extensions: 1041
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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