Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0340
(597 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr... 103 1e-22
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr... 54 1e-07
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 52 2e-07
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 52 2e-07
AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical ... 50 1e-06
U97014-3|AAB52427.3| 856|Caenorhabditis elegans Hypothetical pr... 49 3e-06
AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical ... 49 3e-06
Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical pr... 48 4e-06
Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical p... 48 4e-06
AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determini... 48 4e-06
U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical pr... 47 9e-06
U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical pr... 47 9e-06
Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical pr... 45 5e-05
AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determina... 45 5e-05
L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 30 1.1
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 29 1.9
Z81070-3|CAB02998.1| 408|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z75539-2|CAA99844.2| 555|Caenorhabditis elegans Hypothetical pr... 27 7.7
U32326-1|AAC46965.1| 555|Caenorhabditis elegans G protein signa... 27 7.7
>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical
protein T07D4.3 protein.
Length = 1301
Score = 103 bits (246), Expect = 1e-22
Identities = 49/87 (56%), Positives = 63/87 (72%)
Frame = +3
Query: 3 KVILSTNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTSYATVWASKTNLEQXXXXXXX 182
K+I+STNIAETSITI+DVVYVIDSCKAK +++TS+NNM +ATVWASKTN+ Q
Sbjct: 717 KIIVSTNIAETSITIDDVVYVIDSCKAKERMYTSNNNMVHFATVWASKTNVIQRRGRAGR 776
Query: 183 XXXXXCFTLCTYARYEKLEEHLAAKCL 263
F LC+ R+E L++H A+ L
Sbjct: 777 VRAGYAFHLCSKMRFEALDDHGTAEML 803
Score = 98.3 bits (234), Expect = 4e-21
Identities = 43/84 (51%), Positives = 62/84 (73%)
Frame = +2
Query: 254 QMFRTPLHELALSIKLLRLGAIGHFLSXXXEPPPLDAVIEAEXLLRELGCLDAEDALTPL 433
+M R PLH++AL+IKLLRLG++G FL +PPP D V+E+E +L+ +G LD LT L
Sbjct: 801 EMLRIPLHQIALTIKLLRLGSVGEFLGKALQPPPYDMVVESEAVLQAMGALDRNLELTSL 860
Query: 434 GTILAKLPIEPRLGKMMVLGFVLG 505
G +LA++PIEP + K+++LG LG
Sbjct: 861 GKMLARMPIEPVIAKVLILGTALG 884
>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical
protein F52B5.3 protein.
Length = 1425
Score = 53.6 bits (123), Expect = 1e-07
Identities = 27/80 (33%), Positives = 41/80 (51%)
Frame = +3
Query: 3 KVILSTNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTSYATVWASKTNLEQXXXXXXX 182
K+IL+TNIAE SITI DV++V+D+ K K K F +++ +++N +Q
Sbjct: 704 KIILATNIAEASITIEDVIFVVDTGKVKEKSFDHEAKLSTLTVKPIARSNADQRSGRAGR 763
Query: 183 XXXXXCFTLCTYARYEKLEE 242
C L T Y + E
Sbjct: 764 VANGYCIRLYTEQEYNSMPE 783
Score = 38.3 bits (85), Expect = 0.004
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 29/117 (24%)
Frame = +2
Query: 254 QMFRTPLHELALSIKLL--RLGAIGHFLSXXXEPPPLDAVIEAEXLLRELGCL------- 406
+M R ++++ L KL + I FLS EPP +++++A L ++G
Sbjct: 788 EMKRAAIYDVTLHAKLFAPKTLKISEFLSLAPEPPEKESILQAITFLEQIGAFYTPIKIY 847
Query: 407 -------------DAEDA-------LTPLGTILAKLPIEPRLGKMMVLGFVLGVETP 517
+AE++ LT LG ++A+LP++P+L +M++ G L TP
Sbjct: 848 DNSGNEEGLKNDEEAENSENPEDPELTDLGRLMARLPLDPQLSRMLLFGLALKCLTP 904
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 52.4 bits (120), Expect = 2e-07
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Frame = +2
Query: 245 FGRQMFRTPLHELA---LSIKLLRLGAIG--HFLSXXX-EPPPLDAVIEAEXLLRELGCL 406
F +M TP+ E+ L+ LL+L A+G + + + PPLD++I A L L L
Sbjct: 883 FRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSAL 942
Query: 407 DAEDALTPLGTILAKLPIEPRLGKMMVLGFVLG 505
D + LT LG +A+ P+EP L K++++ LG
Sbjct: 943 DGDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLG 975
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/71 (32%), Positives = 36/71 (50%)
Frame = +3
Query: 3 KVILSTNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTSYATVWASKTNLEQXXXXXXX 182
KV+++TNIAETS+TI+ + YV+D K K++ + M S S+ +Q
Sbjct: 809 KVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGR 868
Query: 183 XXXXXCFTLCT 215
C+ L T
Sbjct: 869 TGPGKCYRLYT 879
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 52.4 bits (120), Expect = 2e-07
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Frame = +2
Query: 245 FGRQMFRTPLHELA---LSIKLLRLGAIG--HFLSXXX-EPPPLDAVIEAEXLLRELGCL 406
F +M TP+ E+ L+ LL+L A+G + + + PPLD++I A L L L
Sbjct: 883 FRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSAL 942
Query: 407 DAEDALTPLGTILAKLPIEPRLGKMMVLGFVLG 505
D + LT LG +A+ P+EP L K++++ LG
Sbjct: 943 DGDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLG 975
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/71 (32%), Positives = 36/71 (50%)
Frame = +3
Query: 3 KVILSTNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTSYATVWASKTNLEQXXXXXXX 182
KV+++TNIAETS+TI+ + YV+D K K++ + M S S+ +Q
Sbjct: 809 KVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGR 868
Query: 183 XXXXXCFTLCT 215
C+ L T
Sbjct: 869 TGPGKCYRLYT 879
>AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical
protein Y37E11AM.1 protein.
Length = 1037
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/80 (31%), Positives = 39/80 (48%)
Frame = +3
Query: 3 KVILSTNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTSYATVWASKTNLEQXXXXXXX 182
K ILSTN+AETS+TI+ + +VIDS K + W SK + Q
Sbjct: 367 KCILSTNVAETSVTIDGIRFVIDSGKVNLIKHEPGTGTQKLTEFWVSKASANQRKGRAGR 426
Query: 183 XXXXXCFTLCTYARYEKLEE 242
C+ L + ++EK+++
Sbjct: 427 TGPGICYRLYSQEQFEKMDD 446
Score = 35.1 bits (77), Expect = 0.038
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +2
Query: 263 RTPLHELALSIKLLRLGAIGHFLSXXXEPPPLDAVIEAEXLLRELGCL--DAED--ALTP 430
R L E+AL + L LG + E P D + E +L+ L D D LT
Sbjct: 454 RVSLQEMALKMISLNLG-LDPRTFPFIEKPSEDVLNEGLEVLKFQRVLRSDRGDILTLTA 512
Query: 431 LGTILAKLPIEPRLGKMMVLGFVL 502
LG +++KLP+E + KM+V G V+
Sbjct: 513 LGNMVSKLPVEVPIAKMLVYGCVV 536
>U97014-3|AAB52427.3| 856|Caenorhabditis elegans Hypothetical
protein T05E8.3 protein.
Length = 856
Score = 48.8 bits (111), Expect = 3e-06
Identities = 29/79 (36%), Positives = 38/79 (48%)
Frame = +3
Query: 3 KVILSTNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTSYATVWASKTNLEQXXXXXXX 182
KVI+STNIAETS+TI + VIDS K K K F + N + SK +Q
Sbjct: 441 KVIISTNIAETSVTIPGIRVVIDSGKVKTKRFEAFNRIDVLKVHNVSKAQAKQRAGRAGR 500
Query: 183 XXXXXCFTLCTYARYEKLE 239
C+ L + + K E
Sbjct: 501 DAPGKCYRLYSREDFHKFE 519
>AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical
protein Y67D2.6 protein.
Length = 732
Score = 48.8 bits (111), Expect = 3e-06
Identities = 26/80 (32%), Positives = 41/80 (51%)
Frame = +3
Query: 3 KVILSTNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTSYATVWASKTNLEQXXXXXXX 182
KV+++TNIAE SITI + YVID+ K++ + N + + V SK + EQ
Sbjct: 356 KVVVATNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGR 415
Query: 183 XXXXXCFTLCTYARYEKLEE 242
C+ L + +E+ E
Sbjct: 416 IRPGKCYRLYPESEFERFAE 435
>Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical
protein C04H5.6 protein.
Length = 1008
Score = 48.4 bits (110), Expect = 4e-06
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +3
Query: 3 KVILSTNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTSYATVWASKTNLEQXXXXXXX 182
KV+L+TNIAETS+TI+ + YVID +K F + + + V SK Q
Sbjct: 635 KVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGR 694
Query: 183 XXXXXCFTLCT-YARYEKLEE 242
CF L T +A +LEE
Sbjct: 695 TGPGKCFRLYTAWAYKHELEE 715
>Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical
protein C04H5.6 protein.
Length = 1008
Score = 48.4 bits (110), Expect = 4e-06
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +3
Query: 3 KVILSTNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTSYATVWASKTNLEQXXXXXXX 182
KV+L+TNIAETS+TI+ + YVID +K F + + + V SK Q
Sbjct: 635 KVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGR 694
Query: 183 XXXXXCFTLCT-YARYEKLEE 242
CF L T +A +LEE
Sbjct: 695 TGPGKCFRLYTAWAYKHELEE 715
>AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determining
protein MOG-4 protein.
Length = 1008
Score = 48.4 bits (110), Expect = 4e-06
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +3
Query: 3 KVILSTNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTSYATVWASKTNLEQXXXXXXX 182
KV+L+TNIAETS+TI+ + YVID +K F + + + V SK Q
Sbjct: 635 KVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGR 694
Query: 183 XXXXXCFTLCT-YARYEKLEE 242
CF L T +A +LEE
Sbjct: 695 TGPGKCFRLYTAWAYKHELEE 715
>U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical
protein F56D2.6b protein.
Length = 700
Score = 47.2 bits (107), Expect = 9e-06
Identities = 27/75 (36%), Positives = 37/75 (49%)
Frame = +3
Query: 3 KVILSTNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTSYATVWASKTNLEQXXXXXXX 182
K ++STNIAETS+TI+ VV+VID +K K++ + S SK + Q
Sbjct: 360 KCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGR 419
Query: 183 XXXXXCFTLCTYARY 227
CF L T Y
Sbjct: 420 TKPGKCFRLYTETAY 434
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/78 (29%), Positives = 45/78 (57%)
Frame = +2
Query: 254 QMFRTPLHELALSIKLLRLGAIGHFLSXXXEPPPLDAVIEAEXLLRELGCLDAEDALTPL 433
++ R+ L + L +K L + HF +PP + ++ A LL L ++ + LT L
Sbjct: 445 EILRSNLGSVVLQLKKLGTEDLVHF--DFMDPPAPETLMRALELLNYLQAINDDGELTEL 502
Query: 434 GTILAKLPIEPRLGKMMV 487
G+++A+ P++P+L KM++
Sbjct: 503 GSLMAEFPLDPQLAKMLI 520
>U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical
protein F56D2.6a protein.
Length = 739
Score = 47.2 bits (107), Expect = 9e-06
Identities = 27/75 (36%), Positives = 37/75 (49%)
Frame = +3
Query: 3 KVILSTNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTSYATVWASKTNLEQXXXXXXX 182
K ++STNIAETS+TI+ VV+VID +K K++ + S SK + Q
Sbjct: 360 KCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGR 419
Query: 183 XXXXXCFTLCTYARY 227
CF L T Y
Sbjct: 420 TKPGKCFRLYTETAY 434
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/78 (29%), Positives = 45/78 (57%)
Frame = +2
Query: 254 QMFRTPLHELALSIKLLRLGAIGHFLSXXXEPPPLDAVIEAEXLLRELGCLDAEDALTPL 433
++ R+ L + L +K L + HF +PP + ++ A LL L ++ + LT L
Sbjct: 445 EILRSNLGSVVLQLKKLGTEDLVHF--DFMDPPAPETLMRALELLNYLQAINDDGELTEL 502
Query: 434 GTILAKLPIEPRLGKMMV 487
G+++A+ P++P+L KM++
Sbjct: 503 GSLMAEFPLDPQLAKMLI 520
>Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical protein
K03H1.2 protein.
Length = 1131
Score = 44.8 bits (101), Expect = 5e-05
Identities = 25/81 (30%), Positives = 42/81 (51%)
Frame = +2
Query: 263 RTPLHELALSIKLLRLGAIGHFLSXXXEPPPLDAVIEAEXLLRELGCLDAEDALTPLGTI 442
RT L + L +K L + + F + PP D ++ + L LG LD LTP+G
Sbjct: 798 RTNLANVVLLLKSLGVDDLLKF--HFMDAPPQDNMLNSMYQLWTLGALDNTGQLTPMGRK 855
Query: 443 LAKLPIEPRLGKMMVLGFVLG 505
+ + P++P L KM+++ +G
Sbjct: 856 MVEFPLDPTLSKMLIMSAEMG 876
Score = 44.4 bits (100), Expect = 6e-05
Identities = 22/76 (28%), Positives = 40/76 (52%)
Frame = +3
Query: 3 KVILSTNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTSYATVWASKTNLEQXXXXXXX 182
K I++TNIAETS+T++ +++VID KMK++ M + + S+ + Q
Sbjct: 710 KAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGR 769
Query: 183 XXXXXCFTLCTYARYE 230
C+ L T +++
Sbjct: 770 TGPGQCYRLYTERQFK 785
>AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determination
protein MOG-1 protein.
Length = 1131
Score = 44.8 bits (101), Expect = 5e-05
Identities = 25/81 (30%), Positives = 42/81 (51%)
Frame = +2
Query: 263 RTPLHELALSIKLLRLGAIGHFLSXXXEPPPLDAVIEAEXLLRELGCLDAEDALTPLGTI 442
RT L + L +K L + + F + PP D ++ + L LG LD LTP+G
Sbjct: 798 RTNLANVVLLLKSLGVDDLLKF--HFMDAPPQDNMLNSMYQLWTLGALDNTGQLTPMGRK 855
Query: 443 LAKLPIEPRLGKMMVLGFVLG 505
+ + P++P L KM+++ +G
Sbjct: 856 MVEFPLDPTLSKMLIMSAEMG 876
Score = 44.4 bits (100), Expect = 6e-05
Identities = 22/76 (28%), Positives = 40/76 (52%)
Frame = +3
Query: 3 KVILSTNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTSYATVWASKTNLEQXXXXXXX 182
K I++TNIAETS+T++ +++VID KMK++ M + + S+ + Q
Sbjct: 710 KAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGR 769
Query: 183 XXXXXCFTLCTYARYE 230
C+ L T +++
Sbjct: 770 TGPGQCYRLYTERQFK 785
>L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical
protein C06E1.10 protein.
Length = 1148
Score = 40.7 bits (91), Expect = 8e-04
Identities = 23/74 (31%), Positives = 38/74 (51%)
Frame = +3
Query: 9 ILSTNIAETSITINDVVYVIDSCKAKMKLFTSHNNMTSYATVWASKTNLEQXXXXXXXXX 188
++STN+AETS+TI V YVID K +L+ S ++ +A S+ + +Q
Sbjct: 604 VISTNVAETSLTIPGVKYVIDGGFEKRRLYDSITGVSRFAVCRISQASGDQRAGRAGRIS 663
Query: 189 XXXCFTLCTYARYE 230
+ L + A Y+
Sbjct: 664 AGHAYRLYSSAVYQ 677
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +1
Query: 298 APPPGCDRSLPVEXXGAPAA-GRCHRGGGSAPRAGLSGRRGRAHATRDHPRQAADRTSPR 474
AP P + +L APAA G + G +AP G S + RD+ A +P
Sbjct: 122 APAPVAEPALAPSPDAAPAADGASYSAGAAAPAGGASYPAKKRRVARDYAEGGAAPAAPA 181
Query: 475 Q 477
+
Sbjct: 182 E 182
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +1
Query: 343 GAPAAGRCHRGGGSAPRAGLSGRRGRAHA-TRDHPR-QAADRTSPRQNDGVR 492
G G RGGG R+ G RGR+ + +RD R ++ DR+ R D R
Sbjct: 82 GGRGGGFGGRGGGGRDRSPYRGDRGRSRSRSRDRGRDRSRDRSRDRSRDRSR 133
>Z81070-3|CAB02998.1| 408|Caenorhabditis elegans Hypothetical
protein F26E4.4 protein.
Length = 408
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 346 APAAGRCHRGGGSAPRAGLSGRRGRAHATRDHPRQAADRTSPRQNDGV 489
APA + +RGG ++ R GR R P+Q +T ++G+
Sbjct: 17 APAQQKNNRGGSTSTRGAGRGRGARGRGAGPRPKQELIQTGGVFSEGL 64
>Z75539-2|CAA99844.2| 555|Caenorhabditis elegans Hypothetical
protein F28C1.2 protein.
Length = 555
Score = 27.5 bits (58), Expect = 7.7
Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 9/82 (10%)
Frame = +1
Query: 265 DSATRACFEHKAPPPGCDRSLPVEXXGAPAAGR--CHRGGGSAPRAGLSG------RRGR 420
DS RA ++ P PGC + V+ +GR GG +A A SG +
Sbjct: 190 DSQERAFWDVHRPVPGCVNTTEVDFRKLSRSGRPKYSSGGHAALAASTSGIGCTQYSQSV 249
Query: 421 AHATRDHPRQA-ADRTSPRQND 483
A A P + TSPR+ND
Sbjct: 250 AAAHASLPSTSNGSATSPRKND 271
>U32326-1|AAC46965.1| 555|Caenorhabditis elegans G protein
signaling regulator protein.
Length = 555
Score = 27.5 bits (58), Expect = 7.7
Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 9/82 (10%)
Frame = +1
Query: 265 DSATRACFEHKAPPPGCDRSLPVEXXGAPAAGR--CHRGGGSAPRAGLSG------RRGR 420
DS RA ++ P PGC + V+ +GR GG +A A SG +
Sbjct: 190 DSQERAFWDVHRPVPGCVNTTEVDFRKLSRSGRPKYSSGGHAALAASTSGIGCTQYSQSV 249
Query: 421 AHATRDHPRQA-ADRTSPRQND 483
A A P + TSPR+ND
Sbjct: 250 AAAHASLPSTSNGSATSPRKND 271
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,498,614
Number of Sequences: 27780
Number of extensions: 228947
Number of successful extensions: 649
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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