Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0338
         (623 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   3.6  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   3.6  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   3.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.8  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   6.3  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   6.3  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   8.4  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   8.4  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -1

Query: 440 LVRILP*TSTQLMMLTVI*IASNNTVPYCSSXHMMVFPS 324
           L R  P T+T +   TV     +NT+P  +S   M FP+
Sbjct: 248 LNRSSPTTATAIASATVTIQNVSNTIPPFASRGSMHFPN 286


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -1

Query: 440 LVRILP*TSTQLMMLTVI*IASNNTVPYCSSXHMMVFPS 324
           L R  P T+T +   TV     +NT+P  +S   M FP+
Sbjct: 196 LNRSSPTTATAIASATVTIQNVSNTIPPFASRGSMHFPN 234


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -1

Query: 440 LVRILP*TSTQLMMLTVI*IASNNTVPYCSSXHMMVFPS 324
           L R  P T+T +   TV     +NT+P  +S   M FP+
Sbjct: 379 LNRSSPTTATAIASATVTIQNVSNTIPPFASRGSMHFPN 417


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = +1

Query: 550 QCRGXKNRVLVKXLLEPVHAXG 615
           QCR  KN        EPVH  G
Sbjct: 81  QCRSIKNECPEPTCDEPVHRPG 102


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +1

Query: 457 TYYLCILRCGYR 492
           TY+LC++ C +R
Sbjct: 159 TYFLCVIVCIFR 170


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = +3

Query: 471 HSALWVQV*YQLHKLYK 521
           ++ALW Q+ Y+ ++LY+
Sbjct: 137 NTALWKQLRYEHYRLYQ 153


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = -3

Query: 435 AYPAIDVNTT-NDVNRDLDSIKQ 370
           A+P+   N    D+NR++D IKQ
Sbjct: 281 AWPSRVANQKLRDLNREVDQIKQ 303


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +1

Query: 505 CTNSINQYHEVPFDAQCRGXKNRVL 579
           C N+ N +    F  +C+  KN  L
Sbjct: 163 CDNNFNVFLRQVFTCRCKDYKNEDL 187


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,504
Number of Sequences: 336
Number of extensions: 3205
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)