Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0338
         (623 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0128 - 13969118-13969222,13969329-13969460,13969558-139696...    30   1.7  
02_01_0486 - 3495792-3496034,3496862-3496934,3497128-3497422,349...    30   1.7  
01_05_0176 - 18957676-18958067,18958139-18958242,18958358-189584...    29   4.0  
02_05_1184 + 34802749-34802892,34802981-34803220,34803636-348039...    28   6.9  

>12_02_0128 -
           13969118-13969222,13969329-13969460,13969558-13969671,
           13971843-13971941,13972035-13972171,13972505-13972598,
           13973248-13973355,13973442-13973537,13973673-13973845,
           13974818-13975172,13975308-13975442,13975524-13975667,
           13975762-13976436,13976552-13976617,13976710-13976877
          Length = 866

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +1

Query: 469 CILRCGYRSSISCTNSINQYHEVPFDAQ-CRGXKNRVLVKXL 591
           CI + G  S++SC++++ QYH   F+ +   G +  +L + +
Sbjct: 369 CIKQQGNNSNMSCSDALQQYHSKSFNPRLASGSQENILTQHM 410


>02_01_0486 -
           3495792-3496034,3496862-3496934,3497128-3497422,
           3497585-3497759,3498349-3498795,3499994-3500053
          Length = 430

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
 Frame = +2

Query: 227 QNINSTKLESKV-PLKTQTTATVKNXVTQDTRVWKETPSYXRKSNTGQYCL---MLSKSR 394
           QN+  T L  ++  +  Q    V+       R WKETP     S    +C    +L K  
Sbjct: 295 QNLPVTLLRIQIRTVNRQPRNGVQQRAAHPHRFWKETPVLVMVSTLAYFCFLEQLLLKMG 354

Query: 395 LTSLVVLTSMAGYALA 442
               ++L S  G+ +A
Sbjct: 355 AVLAILLASFTGFGIA 370


>01_05_0176 -
           18957676-18958067,18958139-18958242,18958358-18958483,
           18959495-18959628,18959757-18959894,18960835-18960964,
           18961316-18961357,18964741-18965024
          Length = 449

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = +1

Query: 466 LCILRCGYRSSISCTNSINQYHEVPFDAQCRGXKNRVLVKXLLEPVHAXGFA 621
           LC    G     +  N++NQ  E+  DA+ +    R L    + P HA  +A
Sbjct: 133 LCCTCAGTMMVAASANTLNQVFEIKNDAKMKRTMRRPLPSGRISPAHAAMWA 184


>02_05_1184 +
           34802749-34802892,34802981-34803220,34803636-34803950,
           34804030-34804209,34804312-34804504,34805062-34805324,
           34805461-34805590,34805719-34805786,34805951-34806199,
           34806284-34806357,34808052-34808143,34808603-34808685,
           34810337-34810408,34810558-34810683,34810996-34811037
          Length = 756

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +3

Query: 114 SYLKVIHCTLCLKHGYVGVYSKPVLFKITNNTLFQHLAR 230
           +Y   I   LC +  Y+ + S  VL   T+N  +QHL R
Sbjct: 245 TYFSQIFFYLCSQDCYIDICSPEVLSLFTDNFDYQHLRR 283


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,884,330
Number of Sequences: 37544
Number of extensions: 307294
Number of successful extensions: 594
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 594
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)