Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0338
(623 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U82010-1|AAC51330.1| 443|Homo sapiens heme A: farnesyltransfera... 52 2e-06
U09466-1|AAA21148.1| 443|Homo sapiens heme A:farnesyltransferas... 52 2e-06
BT006985-1|AAP35631.1| 443|Homo sapiens COX10 homolog, cytochro... 52 2e-06
BC006394-1|AAH06394.1| 443|Homo sapiens COX10 homolog, cytochro... 52 2e-06
BC000060-1|AAH00060.1| 443|Homo sapiens COX10 homolog, cytochro... 52 2e-06
BC024591-1|AAH24591.1| 1222|Homo sapiens histidine acid phosphat... 31 4.4
AF007191-1|AAC02269.1| 589|Homo sapiens intestinal mucin protein. 31 4.4
AB007893-1|BAA24863.2| 1255|Homo sapiens KIAA0433 protein. 31 4.4
BC016858-1|AAH16858.1| 219|Homo sapiens transmembrane protein 1... 30 7.6
>U82010-1|AAC51330.1| 443|Homo sapiens heme A: farnesyltransferase
protein.
Length = 443
Score = 51.6 bits (118), Expect = 2e-06
Identities = 29/68 (42%), Positives = 39/68 (57%)
Frame = +2
Query: 305 TQDTRVWKETPSYXRKSNTGQYCLMLSKSRLTSLVVLTSMAGYALAPAPFQLTTFAFCAV 484
T++ + WKE + + LSK +LT+LVV T+ AG+ALAP PF F +V
Sbjct: 137 TKEEKRWKEMK--LQVYDLPGILAQLSKIKLTALVVSTTAAGFALAPGPFDWPCFLLTSV 194
Query: 485 GTGLVSAA 508
GTGL S A
Sbjct: 195 GTGLASCA 202
Score = 42.3 bits (95), Expect = 0.001
Identities = 21/41 (51%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 502 SCT-NSINQYHEVPFDAQCRGXKNRVLVKXLLEPVHAXGFA 621
SC NSINQ+ EVPFD+ KNR LV+ + P+ A FA
Sbjct: 200 SCAANSINQFFEVPFDSNMNRTKNRPLVRGQISPLLAVSFA 240
>U09466-1|AAA21148.1| 443|Homo sapiens heme A:farnesyltransferase
protein.
Length = 443
Score = 51.6 bits (118), Expect = 2e-06
Identities = 29/68 (42%), Positives = 39/68 (57%)
Frame = +2
Query: 305 TQDTRVWKETPSYXRKSNTGQYCLMLSKSRLTSLVVLTSMAGYALAPAPFQLTTFAFCAV 484
T++ + WKE + + LSK +LT+LVV T+ AG+ALAP PF F +V
Sbjct: 137 TKEEKRWKEMK--LQVYDLPGILAQLSKIKLTALVVSTTAAGFALAPGPFDWPCFLLTSV 194
Query: 485 GTGLVSAA 508
GTGL S A
Sbjct: 195 GTGLASCA 202
Score = 42.3 bits (95), Expect = 0.001
Identities = 21/41 (51%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 502 SCT-NSINQYHEVPFDAQCRGXKNRVLVKXLLEPVHAXGFA 621
SC NSINQ+ EVPFD+ KNR LV+ + P+ A FA
Sbjct: 200 SCAANSINQFFEVPFDSNMNRTKNRPLVRGQISPLLAVSFA 240
>BT006985-1|AAP35631.1| 443|Homo sapiens COX10 homolog, cytochrome
c oxidase assembly protein, heme A: farnesyltransfera
protein.
Length = 443
Score = 51.6 bits (118), Expect = 2e-06
Identities = 29/68 (42%), Positives = 39/68 (57%)
Frame = +2
Query: 305 TQDTRVWKETPSYXRKSNTGQYCLMLSKSRLTSLVVLTSMAGYALAPAPFQLTTFAFCAV 484
T++ + WKE + + LSK +LT+LVV T+ AG+ALAP PF F +V
Sbjct: 137 TKEEKRWKEMK--LQVYDLPGILAQLSKIKLTALVVSTTAAGFALAPGPFDWPCFLLTSV 194
Query: 485 GTGLVSAA 508
GTGL S A
Sbjct: 195 GTGLASCA 202
Score = 42.3 bits (95), Expect = 0.001
Identities = 21/41 (51%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 502 SCT-NSINQYHEVPFDAQCRGXKNRVLVKXLLEPVHAXGFA 621
SC NSINQ+ EVPFD+ KNR LV+ + P+ A FA
Sbjct: 200 SCAANSINQFFEVPFDSNMNRTKNRPLVRGQISPLLAVSFA 240
>BC006394-1|AAH06394.1| 443|Homo sapiens COX10 homolog, cytochrome
c oxidase assembly protein, heme A: farnesyltransfera
protein.
Length = 443
Score = 51.6 bits (118), Expect = 2e-06
Identities = 29/68 (42%), Positives = 39/68 (57%)
Frame = +2
Query: 305 TQDTRVWKETPSYXRKSNTGQYCLMLSKSRLTSLVVLTSMAGYALAPAPFQLTTFAFCAV 484
T++ + WKE + + LSK +LT+LVV T+ AG+ALAP PF F +V
Sbjct: 137 TKEEKRWKEMK--LQVYDLPGILAQLSKIKLTALVVSTTAAGFALAPGPFDWPCFLLTSV 194
Query: 485 GTGLVSAA 508
GTGL S A
Sbjct: 195 GTGLASCA 202
Score = 42.3 bits (95), Expect = 0.001
Identities = 21/41 (51%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 502 SCT-NSINQYHEVPFDAQCRGXKNRVLVKXLLEPVHAXGFA 621
SC NSINQ+ EVPFD+ KNR LV+ + P+ A FA
Sbjct: 200 SCAANSINQFFEVPFDSNMNRTKNRPLVRGQISPLLAVSFA 240
>BC000060-1|AAH00060.1| 443|Homo sapiens COX10 homolog, cytochrome
c oxidase assembly protein, heme A: farnesyltransfera
protein.
Length = 443
Score = 51.6 bits (118), Expect = 2e-06
Identities = 29/68 (42%), Positives = 39/68 (57%)
Frame = +2
Query: 305 TQDTRVWKETPSYXRKSNTGQYCLMLSKSRLTSLVVLTSMAGYALAPAPFQLTTFAFCAV 484
T++ + WKE + + LSK +LT+LVV T+ AG+ALAP PF F +V
Sbjct: 137 TKEEKRWKEMK--LQVYDLPGILAQLSKIKLTALVVSTTAAGFALAPGPFDWPCFLLTSV 194
Query: 485 GTGLVSAA 508
GTGL S A
Sbjct: 195 GTGLASCA 202
Score = 42.3 bits (95), Expect = 0.001
Identities = 21/41 (51%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 502 SCT-NSINQYHEVPFDAQCRGXKNRVLVKXLLEPVHAXGFA 621
SC NSINQ+ EVPFD+ KNR LV+ + P+ A FA
Sbjct: 200 SCAANSINQFFEVPFDSNMNRTKNRPLVRGQISPLLAVSFA 240
>BC024591-1|AAH24591.1| 1222|Homo sapiens histidine acid phosphatase
domain containing 1 protein.
Length = 1222
Score = 30.7 bits (66), Expect = 4.4
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +2
Query: 212 LPASCQNINSTKLESKVPLKTQTTATVKNXVTQDTRVWKETPSYXRKSNTGQ 367
LP + STK SK ++A V N ++ + +T ++ K NTG+
Sbjct: 1169 LPTPPATLKSTKASSKPATSGPSSAVVPNTSSRKKNITSKTETHEHKKNTGK 1220
>AF007191-1|AAC02269.1| 589|Homo sapiens intestinal mucin protein.
Length = 589
Score = 30.7 bits (66), Expect = 4.4
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Frame = +2
Query: 233 INSTKLESKVPLKT--QTTATVKNXVTQDTRVWKETPSYXRKSNTGQYCL---MLSKSRL 397
I ST +E PL T TT TVK VT T ++ET + ++ L M S +RL
Sbjct: 324 ITSTTME---PLSTIVATTGTVKTTVTSSTATFRETTTLTSTTDISTESLMTAMTSTTRL 380
Query: 398 TSLV----VLTSMAGYALAP 445
TS + LTS+ A P
Sbjct: 381 TSAITSKTTLTSLKTTASRP 400
>AB007893-1|BAA24863.2| 1255|Homo sapiens KIAA0433 protein.
Length = 1255
Score = 30.7 bits (66), Expect = 4.4
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +2
Query: 212 LPASCQNINSTKLESKVPLKTQTTATVKNXVTQDTRVWKETPSYXRKSNTGQ 367
LP + STK SK ++A V N ++ + +T ++ K NTG+
Sbjct: 1202 LPTPPATLKSTKASSKPATSGPSSAVVPNTSSRKKNITSKTETHEHKKNTGK 1253
>BC016858-1|AAH16858.1| 219|Homo sapiens transmembrane protein 125
protein.
Length = 219
Score = 29.9 bits (64), Expect = 7.6
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = +2
Query: 350 KSNTGQYCLMLSKSRLTSLVVLTSMAGYALAPAPFQLTTFAFCAVGTGLVSAAQTL*ISI 529
+S G L++ S L LV ++AG A APAP + A +VG L + L + +
Sbjct: 107 RSGGGADALVVLLSGLVLLVTGLTLAGLAAAPAPAR-PLAAMLSVGIALAALGSLLLLGL 165
Query: 530 MKYHL 544
+ Y +
Sbjct: 166 LLYQV 170
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,987,534
Number of Sequences: 237096
Number of extensions: 1783545
Number of successful extensions: 2428
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2428
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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