Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0336
(549 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 133 1e-32
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 131 6e-32
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 117 1e-27
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 103 2e-23
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 94 1e-20
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 56 3e-09
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 42 8e-05
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 34 0.016
SPAP8A3.14c |||mitochondrial inner membrane protein |Schizosacch... 29 0.34
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 26 4.2
SPBPB2B2.01 |||amino acid permease, unknown 12|Schizosaccharomyc... 25 5.6
SPBC1604.06c |||CBF/Mak21 family|Schizosaccharomyces pombe|chr 2... 25 7.3
SPBC9B6.03 |||zinc finger protein|Schizosaccharomyces pombe|chr ... 25 7.3
SPCC736.11 |ago1|csp9|argonaute|Schizosaccharomyces pombe|chr 3|... 25 9.7
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 133 bits (322), Expect = 1e-32
Identities = 61/68 (89%), Positives = 65/68 (95%)
Frame = +1
Query: 1 VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQA 180
VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+NTIFDAKRLIGRKF+D VQ+
Sbjct: 24 VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRKFDDPEVQS 83
Query: 181 DMKHWHFR 204
DMKHW F+
Sbjct: 84 DMKHWPFK 91
Score = 105 bits (252), Expect = 4e-24
Identities = 56/87 (64%), Positives = 62/87 (71%)
Frame = +2
Query: 260 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQXTSHKRCRYHLWLGKRF 439
KTF PEE+SSMVL KM+ETAEAYLG V +AV+TVPAYFNDSQ + K L G
Sbjct: 110 KTFTPEEISSMVLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDA--GLIAGLNV 167
Query: 440 FRIINEPTAAAIAYGLDKKGTGEEMYL 520
RIINEPTAAAIAYGLD+ GE L
Sbjct: 168 LRIINEPTAAAIAYGLDRSNQGESNVL 194
Score = 29.1 bits (62), Expect = 0.45
Identities = 19/61 (31%), Positives = 24/61 (39%)
Frame = +3
Query: 246 YKGKTKPFSPRKSVPWCXXXXXXXXXXXXXXXCRMQLSRFPRTSMTLXRQATKDAGTISG 425
YKG+TK F+P + + P RQATKDAG I+G
Sbjct: 105 YKGETKTFTPEEISSMVLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAG 164
Query: 426 L 428
L
Sbjct: 165 L 165
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 131 bits (317), Expect = 6e-32
Identities = 60/68 (88%), Positives = 64/68 (94%)
Frame = +1
Query: 1 VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQA 180
VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+NTIFDAKRLIGR+F D VQ+
Sbjct: 24 VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRRFNDPEVQS 83
Query: 181 DMKHWHFR 204
DMKHW F+
Sbjct: 84 DMKHWPFK 91
Score = 98.7 bits (235), Expect = 5e-22
Identities = 52/83 (62%), Positives = 60/83 (72%)
Frame = +2
Query: 260 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQXTSHKRCRYHLWLGKRF 439
KTF PEE+SSMVL KM+E+AEA+LG V +AV+TVPAYFNDSQ + K L G
Sbjct: 110 KTFTPEEISSMVLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDA--GLIAGLNV 167
Query: 440 FRIINEPTAAAIAYGLDKKGTGE 508
RIINEPTAAAIAYGLD+ E
Sbjct: 168 LRIINEPTAAAIAYGLDRSNQHE 190
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 117 bits (281), Expect = 1e-27
Identities = 51/68 (75%), Positives = 59/68 (86%)
Frame = +1
Query: 1 VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQA 180
VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP NT+FDAKRLIGR++ED Q
Sbjct: 28 VEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRNTVFDAKRLIGRRYEDPETQK 87
Query: 181 DMKHWHFR 204
D+KHW F+
Sbjct: 88 DIKHWPFK 95
Score = 88.2 bits (209), Expect = 7e-19
Identities = 48/79 (60%), Positives = 55/79 (69%)
Frame = +2
Query: 260 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQXTSHKRCRYHLWLGKRF 439
K F +E+S+MVLTKMKE +EA L K V+ AVITVPAYF+DSQ + K G
Sbjct: 114 KQFTAQEISAMVLTKMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDA--GAIAGLNV 171
Query: 440 FRIINEPTAAAIAYGLDKK 496
RIINEPTAAAIAYGLD K
Sbjct: 172 LRIINEPTAAAIAYGLDAK 190
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 103 bits (246), Expect = 2e-23
Identities = 47/67 (70%), Positives = 55/67 (82%)
Frame = +1
Query: 1 VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQA 180
VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP NTIFD KRLIGRKF++ T+
Sbjct: 57 VEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENTIFDIKRLIGRKFDEKTMAK 116
Query: 181 DMKHWHF 201
D+K + F
Sbjct: 117 DIKSFPF 123
Score = 100 bits (240), Expect = 1e-22
Identities = 53/101 (52%), Positives = 65/101 (64%)
Frame = +2
Query: 200 FEVVSDXXXXXXXXXXXX*DKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFN 379
F +V+D K F PEE+S+M+L+KMK+TAEAYLGK V +AV+TVPAYFN
Sbjct: 123 FHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSKMKQTAEAYLGKPVTHAVVTVPAYFN 182
Query: 380 DSQXTSHKRCRYHLWLGKRFFRIINEPTAAAIAYGLDKKGT 502
D+Q + K G RI+NEPTAAAIAYGLDK T
Sbjct: 183 DAQRQATKDA--GTIAGLNVIRIVNEPTAAAIAYGLDKTDT 221
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 93.9 bits (223), Expect = 1e-20
Identities = 44/79 (55%), Positives = 56/79 (70%)
Frame = +2
Query: 260 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQXTSHKRCRYHLWLGKRF 439
KT+ P ++ +L+KM+ETA YLGK V+NAV+TVPAYFNDSQ + K G
Sbjct: 156 KTYSPSQIGGFILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAA--GAIAGLNV 213
Query: 440 FRIINEPTAAAIAYGLDKK 496
R++NEPTAAA+AYGLDKK
Sbjct: 214 LRVVNEPTAAALAYGLDKK 232
Score = 77.8 bits (183), Expect = 1e-15
Identities = 37/63 (58%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Frame = +1
Query: 4 EIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQA 180
++IAN +G RTTPS VAFT D ERL+G +AK Q +NP NT F KRLIGR+F++ VQ
Sbjct: 73 KVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVINPENTFFATKRLIGRRFKEPEVQR 132
Query: 181 DMK 189
D+K
Sbjct: 133 DIK 135
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 56.0 bits (129), Expect = 3e-09
Identities = 23/59 (38%), Positives = 39/59 (66%)
Frame = +1
Query: 1 VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQ 177
+++I N+ NR+TPS V++ + R +G+AAK+ A N NT+ KRL GR ++D ++
Sbjct: 27 IDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEASNFRNTVGSLKRLAGRTYDDPEIK 85
Score = 40.7 bits (91), Expect = 1e-04
Identities = 24/65 (36%), Positives = 36/65 (55%)
Frame = +2
Query: 299 TKMKETAEAYLGKTVQNAVITVPAYFNDSQXTSHKRCRYHLWLGKRFFRIINEPTAAAIA 478
TK+K AEA L +V + VI++PA+F D Q + L R++N+ AAA+
Sbjct: 127 TKIKAIAEAELIGSVSDVVISIPAWFTDIQRRALLEAANIAGLNP--LRLMNDNAAAALT 184
Query: 479 YGLDK 493
YG+ K
Sbjct: 185 YGITK 189
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 41.5 bits (93), Expect = 8e-05
Identities = 15/57 (26%), Positives = 36/57 (63%)
Frame = +1
Query: 4 EIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATV 174
+++AN++GNR PS +++ + G A+ Q+ N +N++ + + L+G+ ++ T+
Sbjct: 47 DVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNADNSVTNFRDLLGKSHDELTL 103
Score = 39.5 bits (88), Expect = 3e-04
Identities = 22/74 (29%), Positives = 37/74 (50%)
Frame = +2
Query: 257 DKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQXTSHKRCRYHLWLGKR 436
+K E S L ++ E+AE +LG V V++VP YF D+Q + + G
Sbjct: 135 EKILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANE--AGLP 192
Query: 437 FFRIINEPTAAAIA 478
++I++P A +A
Sbjct: 193 VLQLIHDPAAVILA 206
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 33.9 bits (74), Expect = 0.016
Identities = 21/87 (24%), Positives = 40/87 (45%)
Frame = +2
Query: 257 DKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQXTSHKRCRYHLWLGKR 436
++ + EE+ +M + AE + + + V+TVP +FN+ Q + L K
Sbjct: 132 EENYSLEEIIAMTMEHYISLAEEMAHEKITDLVLTVPPHFNELQRSILLEAA--RILNKH 189
Query: 437 FFRIINEPTAAAIAYGLDKKGTGEEMY 517
+I++ A AI Y L + + + Y
Sbjct: 190 VLALIDDNVAVAIEYSLSRSFSTDPTY 216
Score = 29.1 bits (62), Expect = 0.45
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +1
Query: 1 VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLI 147
+EI+ R S VAF ER+ G A N P ++I + K L+
Sbjct: 45 LEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPAHSIRNVKELL 93
>SPAP8A3.14c |||mitochondrial inner membrane protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 677
Score = 29.5 bits (63), Expect = 0.34
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -3
Query: 505 SSTLFVKTVSNRSSSRFIDDSEETFSKPEMVPAS 404
++T F +N+S F+DD FS+PEM S
Sbjct: 549 NTTTFKTIANNKSVDAFLDDCVSFFSRPEMTQDS 582
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 25.8 bits (54), Expect = 4.2
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = -2
Query: 197 CQCFMSACTVASSNLRPMRRLASNIVLLGFIATWFLAASPMRRSVS 60
C F + C N +P S V GFI W +AA P+ S +
Sbjct: 1540 CFAFFTICAYTFMNSQPGLEDKSRAVN-GFIRIWIMAALPIAISTA 1584
>SPBPB2B2.01 |||amino acid permease, unknown 12|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 585
Score = 25.4 bits (53), Expect = 5.6
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Frame = -1
Query: 366 GTVITAFCTVLPR*ASAV------SFIFVSTMELTSSGKKVLSYPYMXTLILGLPPSLTT 205
GT++ FCTV AV SF+ +T + S LS+ Y+ + I+ +P LTT
Sbjct: 125 GTMV--FCTVYALGELAVAFPTRGSFVTHATRFIDESWGFALSWNYVFSFIVTIPLELTT 182
Query: 204 SKVPVLH-VGLHSSIF 160
+ + + L+S I+
Sbjct: 183 GTMMIKYWTNLNSGIW 198
>SPBC1604.06c |||CBF/Mak21 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 485
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -3
Query: 259 VLPLYXYLDLRFASITDNLESASASCRL 176
+L L+ Y+DL SI + ++A+A CR+
Sbjct: 19 ILVLFDYIDLSNHSIDEVNDAAAALCRV 46
>SPBC9B6.03 |||zinc finger protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 293
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 390 RQATKDAGTISGLENVSSESS 452
RQAT G++SG N SS S+
Sbjct: 41 RQATNGTGSVSGSPNSSSNST 61
>SPCC736.11 |ago1|csp9|argonaute|Schizosaccharomyces pombe|chr
3|||Manual
Length = 834
Score = 24.6 bits (51), Expect = 9.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 270 KKVLSYPYMXTLILGLPPSLTTSKVPVLHVGLHSSI 163
+K +++PY L PSL VPV + LH I
Sbjct: 718 EKHVTHPYQYDFYLISHPSLQGVSVPVHYTVLHDEI 753
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,231,484
Number of Sequences: 5004
Number of extensions: 43577
Number of successful extensions: 134
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 123
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 227943826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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