Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0336
(549 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 127 5e-30
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 125 2e-29
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 125 3e-29
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 102 2e-22
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 72 4e-13
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 60 1e-09
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 4e-06
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 40 0.002
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.62
SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88) 29 1.9
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 1.9
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 2.5
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 2.5
SB_36890| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_33931| Best HMM Match : NADH5_C (HMM E-Value=0.67) 29 3.3
SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05) 28 5.8
SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2) 28 5.8
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 127 bits (307), Expect = 5e-30
Identities = 57/68 (83%), Positives = 64/68 (94%)
Frame = +1
Query: 1 VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQA 180
VEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA+NP NTIFDAKRLIGR+++DATVQ+
Sbjct: 26 VEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVALNPENTIFDAKRLIGRRYDDATVQS 85
Query: 181 DMKHWHFR 204
DMK W F+
Sbjct: 86 DMKLWPFK 93
Score = 104 bits (249), Expect = 5e-23
Identities = 58/107 (54%), Positives = 69/107 (64%)
Frame = +2
Query: 200 FEVVSDXXXXXXXXXXXX*DKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFN 379
F+++SD KTF EE+SSMVL KMKETAEAYLG+ V +AVITVPAYFN
Sbjct: 92 FKIISDNNKPKIQVEYKGERKTFAAEEISSMVLGKMKETAEAYLGQKVTSAVITVPAYFN 151
Query: 380 DSQXTSHKRCRYHLWLGKRFFRIINEPTAAAIAYGLDKKGTGEEMYL 520
DSQ + K G R+INEPTAAA+AYGLDK +GE+ L
Sbjct: 152 DSQRQATKDA--GTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVL 196
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 125 bits (302), Expect = 2e-29
Identities = 57/67 (85%), Positives = 61/67 (91%)
Frame = +1
Query: 1 VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQA 180
VEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVAMNP NTIFDAKRLIGR+F+D V+
Sbjct: 26 VEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVAMNPTNTIFDAKRLIGRRFDDPGVKD 85
Query: 181 DMKHWHF 201
DMKHW F
Sbjct: 86 DMKHWSF 92
Score = 93.1 bits (221), Expect = 1e-19
Identities = 51/78 (65%), Positives = 58/78 (74%)
Frame = +2
Query: 278 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQXTSHKRCRYHLWLGKRFFRIINE 457
++SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQ + K + G RIINE
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDA--GVISGLNVLRIINE 268
Query: 458 PTAAAIAYGLDKKGTGEE 511
PTAAAIAYGLDKK G+E
Sbjct: 269 PTAAAIAYGLDKK-VGQE 285
Score = 75.4 bits (177), Expect = 3e-14
Identities = 36/48 (75%), Positives = 40/48 (83%)
Frame = +2
Query: 260 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQXTSHK 403
KTFF EE+SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQ + K
Sbjct: 137 KTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATK 184
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 125 bits (301), Expect = 3e-29
Identities = 57/67 (85%), Positives = 60/67 (89%)
Frame = +1
Query: 1 VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQA 180
VEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVAMNP NT+FDAKRLIGRKF+D V
Sbjct: 26 VEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVAMNPENTVFDAKRLIGRKFDDPVVAR 85
Query: 181 DMKHWHF 201
DM HW F
Sbjct: 86 DMTHWPF 92
Score = 105 bits (253), Expect = 2e-23
Identities = 55/79 (69%), Positives = 61/79 (77%)
Frame = +2
Query: 260 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQXTSHKRCRYHLWLGKRF 439
K+FFPEE+SSMVLTKMKETAEAYLG V +AV+TVPAYF+DSQ + K G
Sbjct: 112 KSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDA--GTIAGLNV 169
Query: 440 FRIINEPTAAAIAYGLDKK 496
RIINEPTAAAIAYGLDKK
Sbjct: 170 LRIINEPTAAAIAYGLDKK 188
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 102 bits (244), Expect = 2e-22
Identities = 48/69 (69%), Positives = 57/69 (82%), Gaps = 1/69 (1%)
Frame = +1
Query: 1 VEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQ 177
VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP NT+FDAKRLIGR ++D +VQ
Sbjct: 723 VEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPENTVFDAKRLIGRSWDDTSVQ 782
Query: 178 ADMKHWHFR 204
D+K + F+
Sbjct: 783 NDLKFFPFK 791
Score = 102 bits (244), Expect = 2e-22
Identities = 56/87 (64%), Positives = 64/87 (73%)
Frame = +2
Query: 260 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQXTSHKRCRYHLWLGKRF 439
KTF EE+S+MVLTKMKETAEAYLGK V +AV+TVPAYFND+Q + K G
Sbjct: 810 KTFAAEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDA--GAIAGLTV 867
Query: 440 FRIINEPTAAAIAYGLDKKGTGEEMYL 520
RIINEPTAAAIAYG+DKK GE+ L
Sbjct: 868 MRIINEPTAAAIAYGMDKK-EGEKNIL 893
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 71.7 bits (168), Expect = 4e-13
Identities = 47/105 (44%), Positives = 63/105 (60%), Gaps = 22/105 (20%)
Frame = +2
Query: 260 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQXTSHK------------ 403
++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+FND+Q + K
Sbjct: 11 RSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAGTIAGLDVLS 70
Query: 404 ---------RCRYHLWLGK-RFFRIINEPTAAAIAYGLDKKGTGE 508
R R G+ R RIINEPTAAAIAYGLDK G+
Sbjct: 71 RTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLDKARGGK 115
Score = 31.1 bits (67), Expect = 0.62
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +3
Query: 390 RQATKDAGTISGLENVSSESS 452
RQATKDAGTI+GL+ +S +S
Sbjct: 54 RQATKDAGTIAGLDVLSRTAS 74
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 60.1 bits (139), Expect = 1e-09
Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +2
Query: 272 PEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQXTSHKRCRYHLWLGKRFFRII 451
PEE+ V+ K++ AE L TV AV++VPA F+ Q + + G R+I
Sbjct: 146 PEEIGGYVIKKLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVKAAS--LAGITVLRVI 203
Query: 452 NEPTAAAIAYGLDKK-GTGEEMYLSL 526
NEPTAAA+AYGL KK G M + L
Sbjct: 204 NEPTAAALAYGLHKKEGVANVMVVDL 229
Score = 59.3 bits (137), Expect = 2e-09
Identities = 27/68 (39%), Positives = 42/68 (61%)
Frame = +1
Query: 1 VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQA 180
++I +++ ++ PS VAFTD L+G+ A +Q +NP NTI+DAKR IG+ F +
Sbjct: 55 IDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAEINPKNTIYDAKRFIGKTFTKQELLE 114
Query: 181 DMKHWHFR 204
K + FR
Sbjct: 115 IGKLYQFR 122
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 55.6 bits (128), Expect = 3e-08
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Frame = +2
Query: 260 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQXTSHKRCRY--HLWLGK 433
+ F PE+V +M+ T++K TAE L V + VI+VP+Y+ D Q +RC G
Sbjct: 169 EVFSPEQVMAMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQ----RRCMLDASATAGL 224
Query: 434 RFFRIINEPTAAAIAYGLDKK 496
R++N+ TA ++AYG+ K+
Sbjct: 225 NCLRLMNDTTAVSLAYGIYKQ 245
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +1
Query: 1 VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 99
+E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 23 IETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 33.9 bits (74), Expect = 0.088
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1
Query: 109 NPNNTIFDAKRLIGRKFEDATVQADMKHWHFR 204
N NTI KR IGRKF D VQ ++ H ++
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYK 149
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 48.4 bits (110), Expect = 4e-06
Identities = 25/77 (32%), Positives = 41/77 (53%)
Frame = +2
Query: 257 DKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQXTSHKRCRYHLWLGKR 436
D TF PEE+ M+L + E + +++ V+TVP +FN ++ + R +G
Sbjct: 77 DVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLRAAE--LVGLN 134
Query: 437 FFRIINEPTAAAIAYGL 487
+I+N TA A+ YGL
Sbjct: 135 VLQIMNSNTAVALNYGL 151
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +1
Query: 7 IIANDQGNRTTPSYVAFTDTERLI 78
IIAND G+R TP+ VAF+DTE+LI
Sbjct: 87 IIANDAGDRVTPAMVAFSDTEKLI 110
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.62
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +1
Query: 4 EIIANDQGNRTTPSYVAFT-DTERL 75
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88)
Length = 953
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +3
Query: 12 RQRPGQQDHSVLCCVHRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASR 182
RQ + +++ H R +R+ ++ GG +EP + R T T C+CA R
Sbjct: 267 RQSAPSRSMAIINKTHGKRHGYRKLSRDCGGRRPNEPYERTARVHTILSTDTETCFCAKR 326
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -3
Query: 112 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 14
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 29.1 bits (62), Expect = 2.5
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 130 RILCCWGSSPPGSWRH 83
R++CC G SP WRH
Sbjct: 395 RVVCCQGDSPSPRWRH 410
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 29.1 bits (62), Expect = 2.5
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 130 RILCCWGSSPPGSWRH 83
R++CC G SP WRH
Sbjct: 170 RVVCCQGDSPSPRWRH 185
>SB_36890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1881
Score = 28.7 bits (61), Expect = 3.3
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Frame = +3
Query: 57 HRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASRH------EALALSRL 209
H R +R+ + GG +EP + R T T C+CA R+ AL +
Sbjct: 1181 HGERHGYRKLSRVCGGRRPNEPYERTARVHTILSTDAETCFCAKRYGPEIPFNALIVGPT 1240
Query: 210 SVMEANLRSR*XYKGK 257
S + R R ++GK
Sbjct: 1241 SCGKTQFRLRGPFRGK 1256
>SB_33931| Best HMM Match : NADH5_C (HMM E-Value=0.67)
Length = 407
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = -1
Query: 309 FIFVSTMELTSSGKKVLSYPYMXTLILGLPPSL 211
+IF ST E++++ V+SYP++ ++L P L
Sbjct: 83 YIFPSTPEISATTSIVVSYPFLFLILLVQPTML 115
>SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05)
Length = 1264
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +3
Query: 57 HRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASRHEALA 197
H R +R+ + GG +EP + R T T C+CA R+ + A
Sbjct: 421 HGERHGYRKLSRVCGGRRPNEPYERTARVHTILSTDTETCFCAKRYGSAA 470
>SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2)
Length = 451
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -2
Query: 194 QCFMSACTVASSNLRPMRRLASNIVLLGFIATWFLAASPMRRSVSVNAT 48
QCF+S C + S + + R+ L TW + + M S +AT
Sbjct: 169 QCFLSVCDLCCSLMTQIPRMRHTWDFLEHAPTWISSQTSMSFSAITDAT 217
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,493,160
Number of Sequences: 59808
Number of extensions: 358368
Number of successful extensions: 1062
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1052
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1264269032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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