Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0334
(461 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 25 0.45
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 25 0.45
AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment h... 22 3.2
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 21 4.2
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 21 5.6
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 21 5.6
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 21 5.6
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 21 7.4
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 21 7.4
AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant transcrip... 21 7.4
DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 20 9.7
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 20 9.7
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 24.6 bits (51), Expect = 0.45
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -2
Query: 373 QADHPRQVQRHHQVAGFQPAGRQG 302
Q HP+ Q HHQ G+QG
Sbjct: 172 QEQHPQHHQPHHQQQHMMYGGQQG 195
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 24.6 bits (51), Expect = 0.45
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -2
Query: 373 QADHPRQVQRHHQVAGFQPAGRQG 302
Q HP+ Q HHQ G+QG
Sbjct: 174 QEQHPQHHQPHHQQQHMMYGGQQG 197
>AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment
homeodomain protein protein.
Length = 232
Score = 21.8 bits (44), Expect = 3.2
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -3
Query: 429 SMKSTMEDEKLKEKISDSD 373
S+ S EDE+++ ++SD D
Sbjct: 18 SLLSKKEDEEVEHRLSDRD 36
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 21.4 bits (43), Expect = 4.2
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3
Query: 186 PEPEVPPPGLEALAPPS 136
P P+VPP L + PP+
Sbjct: 176 PLPQVPPLPLPPIFPPT 192
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 21.0 bits (42), Expect = 5.6
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +1
Query: 376 RVRDLFLELLIL 411
RV+DLFLE ++L
Sbjct: 581 RVKDLFLEAVLL 592
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.0 bits (42), Expect = 5.6
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +3
Query: 294 HTPPCRPAGWNP 329
H PP P G NP
Sbjct: 743 HQPPRNPVGTNP 754
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 21.0 bits (42), Expect = 5.6
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +3
Query: 294 HTPPCRPAGWNP 329
H PP P G NP
Sbjct: 635 HQPPRNPVGTNP 646
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 20.6 bits (41), Expect = 7.4
Identities = 9/25 (36%), Positives = 10/25 (40%)
Frame = -3
Query: 168 PPGLEALAPPSRRSIKPTFHTTLKP 94
PP E L P + TTL P
Sbjct: 108 PPNSEPLVSPKSEKEEKDMETTLTP 132
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 20.6 bits (41), Expect = 7.4
Identities = 11/40 (27%), Positives = 16/40 (40%)
Frame = -3
Query: 186 PEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNNHLVTS 67
P+ E+P P + + S+ PT T P L S
Sbjct: 73 PKREIPSPKRSSPILAEKVSVSPTTPPTPSPPPEERLTPS 112
>AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant
transcription factor TcDfd1 protein.
Length = 126
Score = 20.6 bits (41), Expect = 7.4
Identities = 8/23 (34%), Positives = 10/23 (43%)
Frame = -3
Query: 144 PPSRRSIKPTFHTTLKPTCNNHL 76
PP I+P +P CN L
Sbjct: 95 PPIHHQIRPPILHDTQPMCNPQL 117
>DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired
protein.
Length = 311
Score = 20.2 bits (40), Expect = 9.7
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = -3
Query: 237 RVPEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRS 127
RVP+ +S + PEP P + + SR+S
Sbjct: 275 RVPQHQVLQSPSSTSSSPEPRSPESLFKPVTVISRQS 311
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 20.2 bits (40), Expect = 9.7
Identities = 12/48 (25%), Positives = 17/48 (35%)
Frame = -3
Query: 258 PKLRRCTRVPEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPT 115
PK + E SPE + + P + APP + PT
Sbjct: 9 PKRMKWEGGEEGSPEEGDKLEGDEDTGSMTPNSAASPAPPEEEAASPT 56
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,010
Number of Sequences: 336
Number of extensions: 1990
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10616413
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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