Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0332
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 166 1e-41
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 166 1e-41
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 154 6e-38
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 112 2e-25
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 112 2e-25
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 101 3e-22
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 94 7e-20
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 86 2e-17
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 67 9e-12
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 67 9e-12
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 64 1e-10
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 64 1e-10
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 64 1e-10
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 38 0.006
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.13
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 31 0.54
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 31 0.54
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 31 0.71
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 31 0.71
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 31 0.94
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 31 0.94
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 31 0.94
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 31 0.94
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 1.6
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 6.6
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 28 6.6
AC084196-7|AAK29949.2| 284|Caenorhabditis elegans Hypothetical ... 28 6.6
Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical pr... 27 8.7
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 27 8.7
U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical pr... 27 8.7
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 27 8.7
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 27 8.7
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 166 bits (403), Expect = 1e-41
Identities = 85/135 (62%), Positives = 94/135 (69%)
Frame = +3
Query: 246 GYHIDIALWKFETSKYYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 425
G IDIALWKFET+KYY+TIIDA GHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISK
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISK 129
Query: 426 NGQTREHALLAFTLGVKQLIVGVNKMDSLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSL 605
NGQTREHALLA TLGVKQLIV NKMDS + + +++
Sbjct: 130 NGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVP 189
Query: 606 SCPFLDGTGDNMLEL 650
P GDNMLE+
Sbjct: 190 FVPISGFNGDNMLEV 204
Score = 90.6 bits (215), Expect = 8e-19
Identities = 41/42 (97%), Positives = 41/42 (97%)
Frame = +1
Query: 118 LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAXRE 243
LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA RE
Sbjct: 27 LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Score = 58.8 bits (136), Expect = 3e-09
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHL 121
MGKEK HINIVVIGHVDSGKSTTTGHL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHL 27
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 166 bits (403), Expect = 1e-41
Identities = 85/135 (62%), Positives = 94/135 (69%)
Frame = +3
Query: 246 GYHIDIALWKFETSKYYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 425
G IDIALWKFET+KYY+TIIDA GHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISK
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISK 129
Query: 426 NGQTREHALLAFTLGVKQLIVGVNKMDSLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSL 605
NGQTREHALLA TLGVKQLIV NKMDS + + +++
Sbjct: 130 NGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVP 189
Query: 606 SCPFLDGTGDNMLEL 650
P GDNMLE+
Sbjct: 190 FVPISGFNGDNMLEV 204
Score = 90.6 bits (215), Expect = 8e-19
Identities = 41/42 (97%), Positives = 41/42 (97%)
Frame = +1
Query: 118 LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAXRE 243
LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA RE
Sbjct: 27 LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Score = 58.8 bits (136), Expect = 3e-09
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHL 121
MGKEK HINIVVIGHVDSGKSTTTGHL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHL 27
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 154 bits (373), Expect = 6e-38
Identities = 87/137 (63%), Positives = 99/137 (72%), Gaps = 4/137 (2%)
Frame = +3
Query: 246 GYHIDIALWKFETSKYYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 425
G IDIALWKFET+KYY+TIIDA GHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISK
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISK 129
Query: 426 NGQTREHALLAFTLGVKQLIVGVNKMDSLNHHTVSPD-LRKSR--RKYPHTSRRLATTQL 596
NGQTREHALLA TLGVKQL+ SL T SPD R+S ++ H S+ +T+
Sbjct: 130 NGQTREHALLAQTLGVKQLV-------SLRSPTRSPDSSRRSDTIQRLFHLSQSPDSTET 182
Query: 597 LSLSCP-FLDGTGDNML 644
L P G+ D +L
Sbjct: 183 TCLRSPRTCHGSRDGLL 199
Score = 90.6 bits (215), Expect = 8e-19
Identities = 41/42 (97%), Positives = 41/42 (97%)
Frame = +1
Query: 118 LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAXRE 243
LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA RE
Sbjct: 27 LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Score = 58.8 bits (136), Expect = 3e-09
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHL 121
MGKEK HINIVVIGHVDSGKSTTTGHL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHL 27
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 112 bits (270), Expect = 2e-25
Identities = 53/90 (58%), Positives = 66/90 (73%)
Frame = +3
Query: 246 GYHIDIALWKFETSKYYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 425
G +DI FETS + ++DA GH+DFI NMITGTSQAD A+L+V A TGEFE G
Sbjct: 233 GVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFEN 292
Query: 426 NGQTREHALLAFTLGVKQLIVGVNKMDSLN 515
GQT+EHALL +LGV QLIV VNK+D+++
Sbjct: 293 GGQTKEHALLLRSLGVTQLIVAVNKLDTVD 322
Score = 47.6 bits (108), Expect = 8e-06
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = +1
Query: 118 LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAXRE 243
L++ +D RTI+KF+ EA GK SF YAWVLD+ + RE
Sbjct: 190 LLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERE 231
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = +2
Query: 50 EKTHINIVVIGHVDSGKSTTTGHLSTNVVVL 142
+K IN++V+GHVD+GKST GHL ++ V+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVV 197
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/36 (36%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +2
Query: 521 YSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGW 625
+S+ RF+EIK +S ++ ++ G++ FVP+SG+
Sbjct: 323 WSQDRFDEIKNNLSVFLTRQAGFSKP--KFVPVSGF 356
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 112 bits (270), Expect = 2e-25
Identities = 53/90 (58%), Positives = 66/90 (73%)
Frame = +3
Query: 246 GYHIDIALWKFETSKYYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 425
G +DI FETS + ++DA GH+DFI NMITGTSQAD A+L+V A TGEFE G
Sbjct: 251 GVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFEN 310
Query: 426 NGQTREHALLAFTLGVKQLIVGVNKMDSLN 515
GQT+EHALL +LGV QLIV VNK+D+++
Sbjct: 311 GGQTKEHALLLRSLGVTQLIVAVNKLDTVD 340
Score = 47.6 bits (108), Expect = 8e-06
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = +1
Query: 118 LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAXRE 243
L++ +D RTI+KF+ EA GK SF YAWVLD+ + RE
Sbjct: 208 LLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERE 249
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = +2
Query: 50 EKTHINIVVIGHVDSGKSTTTGHLSTNVVVL 142
+K IN++V+GHVD+GKST GHL ++ V+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVV 215
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/36 (36%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +2
Query: 521 YSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGW 625
+S+ RF+EIK +S ++ ++ G++ FVP+SG+
Sbjct: 341 WSQDRFDEIKNNLSVFLTRQAGFSKP--KFVPVSGF 374
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 101 bits (243), Expect = 3e-22
Identities = 52/121 (42%), Positives = 73/121 (60%)
Frame = +3
Query: 144 QTYHREVREGGPGNG*RILQICLGIGQTKG*X*AGYHIDIALWKFETSKYYVTIIDAXGH 323
+ Y RE +E G + L C+ + G +++ FET K + TI+DA GH
Sbjct: 142 EKYEREAKEKGRESW--YLSWCMDTNDEE--REKGKTVEVGRAYFETEKRHFTILDAPGH 197
Query: 324 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKM 503
+ F+ NMI G +QAD AVL+++A GEFE G + GQTREH++L T GVK L++ VNKM
Sbjct: 198 KSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQTREHSMLVKTAGVKHLVILVNKM 257
Query: 504 D 506
D
Sbjct: 258 D 258
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/42 (42%), Positives = 29/42 (69%)
Frame = +1
Query: 118 LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAXRE 243
L++ G +DKRT+EK+E+EA+E G+ S+ +W +D RE
Sbjct: 129 LMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTNDEERE 170
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +2
Query: 44 GKEKTHINIVVIGHVDSGKSTTTGHL 121
G K HIN+V +GHVD+GKST G L
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQL 129
Score = 35.5 bits (78), Expect = 0.033
Identities = 13/35 (37%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +2
Query: 521 YSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISG 622
+ E RF+EI+ +++ +++K+G+NP + +VP SG
Sbjct: 264 WEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSG 298
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 94.3 bits (224), Expect = 7e-20
Identities = 42/48 (87%), Positives = 45/48 (93%)
Frame = +3
Query: 246 GYHIDIALWKFETSKYYVTIIDAXGHRDFIKNMITGTSQADCAVLIVA 389
G IDIALWKFET+KYY+TIIDA GHRDFIKNMITGTSQADCAVL+VA
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 90.6 bits (215), Expect = 8e-19
Identities = 41/42 (97%), Positives = 41/42 (97%)
Frame = +1
Query: 118 LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAXRE 243
LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA RE
Sbjct: 27 LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Score = 65.3 bits (152), Expect = 4e-11
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = +2
Query: 509 TEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWH 628
TEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++
Sbjct: 124 TEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFN 163
Score = 58.8 bits (136), Expect = 3e-09
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHL 121
MGKEK HINIVVIGHVDSGKSTTTGHL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHL 27
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 85.8 bits (203), Expect = 2e-17
Identities = 38/41 (92%), Positives = 39/41 (95%)
Frame = +1
Query: 118 LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAXR 240
LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK +
Sbjct: 27 LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKVTK 67
Score = 58.8 bits (136), Expect = 3e-09
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHL 121
MGKEK HINIVVIGHVDSGKSTTTGHL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHL 27
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 67.3 bits (157), Expect = 9e-12
Identities = 38/87 (43%), Positives = 51/87 (58%)
Frame = +3
Query: 246 GYHIDIALWKFETSKYYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 425
G I++A +E+ + D GH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 93 GITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME----- 147
Query: 426 NGQTREHALLAFTLGVKQLIVGVNKMD 506
QT+EH +LA +GVK + + +NK D
Sbjct: 148 --QTKEHLILAKQVGVKNMAIFINKAD 172
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 53 KTHINIVVIGHVDSGKSTTTGHLS 124
K ++N+ IGH+D GK+T T ++
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAIT 66
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 67.3 bits (157), Expect = 9e-12
Identities = 38/87 (43%), Positives = 51/87 (58%)
Frame = +3
Query: 246 GYHIDIALWKFETSKYYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 425
G I++A +E+ + D GH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 93 GITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME----- 147
Query: 426 NGQTREHALLAFTLGVKQLIVGVNKMD 506
QT+EH +LA +GVK + + +NK D
Sbjct: 148 --QTKEHLILAKQVGVKNMAIFINKAD 172
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 53 KTHINIVVIGHVDSGKSTTTGHLS 124
K ++N+ IGH+D GK+T T ++
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAIT 66
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 63.7 bits (148), Expect = 1e-10
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Frame = +3
Query: 273 KFETSKYYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 452
++ET+K + ID GH D+IKNMITG +Q + A+L+VAA G QTREH L
Sbjct: 106 EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLL 158
Query: 453 LAFTLGV--KQLIVGVNKMDSL 512
LA +GV ++V +NK+D +
Sbjct: 159 LARQVGVPLDNIVVFMNKVDEV 180
Score = 33.5 bits (73), Expect = 0.13
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 47 KEKTHINIVVIGHVDSGKSTTTGHLS 124
++K H+N+ IGHVD GK+T T ++
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAIT 70
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 63.7 bits (148), Expect = 1e-10
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Frame = +3
Query: 273 KFETSKYYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 452
++ET+K + ID GH D+IKNMITG +Q + A+L+VAA G QTREH L
Sbjct: 107 EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLL 159
Query: 453 LAFTLGV--KQLIVGVNKMDSL 512
LA +GV ++V +NK+D +
Sbjct: 160 LARQVGVPLDNIVVFMNKVDEV 181
Score = 33.5 bits (73), Expect = 0.13
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 47 KEKTHINIVVIGHVDSGKSTTTGHLS 124
++K H+N+ IGHVD GK+T T ++
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAIT 71
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 63.7 bits (148), Expect = 1e-10
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Frame = +3
Query: 273 KFETSKYYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 452
++ET+K + ID GH D+IKNMITG +Q + A+L+VAA G QTREH L
Sbjct: 107 EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLL 159
Query: 453 LAFTLGV--KQLIVGVNKMDSL 512
LA +GV ++V +NK+D +
Sbjct: 160 LARQVGVPLDNIVVFMNKVDEV 181
Score = 33.5 bits (73), Expect = 0.13
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 47 KEKTHINIVVIGHVDSGKSTTTGHLS 124
++K H+N+ IGHVD GK+T T ++
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAIT 71
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/86 (29%), Positives = 43/86 (50%)
Frame = +3
Query: 297 VTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 476
+ +ID GH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 477 QLIVGVNKMDSLNHHTVSPDLRKSRR 554
++I+ +NK D +S +K R+
Sbjct: 127 RVIIVLNKCDLAEKSKISESAKKVRK 152
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +2
Query: 62 INIVVIGHVDSGKSTTTGHLS 124
+N+ ++GHVDSGK+T T ++
Sbjct: 14 LNLGILGHVDSGKTTLTRRIA 34
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 37.9 bits (84), Expect = 0.006
Identities = 28/73 (38%), Positives = 33/73 (45%)
Frame = +3
Query: 297 VTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 476
VT +D GH F G AD VL+VAA G E QT + A V
Sbjct: 206 VTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE-------QTAQSIKFAKDANV- 257
Query: 477 QLIVGVNKMDSLN 515
QL+V VNK+D N
Sbjct: 258 QLVVAVNKIDKPN 270
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -2
Query: 499 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 371
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 31.5 bits (68), Expect = 0.54
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 504 DSLNHHTVSP-DLRKSRRKYPHTSRRLATTQLLSLSCPFLDGTGDNML 644
D + TVS D K+R KYP A T+ + C DGTG N+L
Sbjct: 609 DDIEGGTVSARDEFKARAKYPGEKYEYAVTEARKIWCFGPDGTGPNLL 656
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLSTNVVVL 142
M +++ N+ VI HVD GKST T L + ++
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII 46
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 31.5 bits (68), Expect = 0.54
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = +3
Query: 291 YYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 470
Y + +ID GH DF + + D +L+VAA G QT + LAF
Sbjct: 102 YLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG-------VQAQTIANFWLAFEKN 154
Query: 471 VKQLIVGVNKMD 506
+ Q+I +NK+D
Sbjct: 155 I-QIIPVINKID 165
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 31.1 bits (67), Expect = 0.71
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 17 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLS 124
++IRD P K+ + V+G+VD+GKST G L+
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLT 161
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 31.1 bits (67), Expect = 0.71
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 17 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLS 124
++IRD P K+ + V+G+VD+GKST G L+
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLT 161
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 561 PHTSRRLATTQLLSLSCPFLDGTGDN 638
PH SR T L+ SCPFLD ++
Sbjct: 158 PHLSRNSFTANALNCSCPFLDAANED 183
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 561 PHTSRRLATTQLLSLSCPFLDGTGDN 638
PH SR T L+ SCPFLD ++
Sbjct: 158 PHLSRNSFTANALNCSCPFLDAANED 183
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 561 PHTSRRLATTQLLSLSCPFLDGTGDN 638
PH SR T L+ SCPFLD ++
Sbjct: 158 PHLSRNSFTANALNCSCPFLDAANED 183
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 561 PHTSRRLATTQLLSLSCPFLDGTGDN 638
PH SR T L+ SCPFLD ++
Sbjct: 158 PHLSRNSFTANALNCSCPFLDAANED 183
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/77 (29%), Positives = 35/77 (45%)
Frame = +3
Query: 303 IIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 482
IID GH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 483 IVGVNKMDSLNHHTVSP 533
++ +NK+D L + +P
Sbjct: 605 VIALNKIDRLYEYESNP 621
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +2
Query: 62 INIVVIGHVDSGKSTTTGHLS 124
+N+ ++GHVDSGK+T T ++
Sbjct: 14 LNLGILGHVDSGKTTLTRRIA 34
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLSTNVVVL 142
M +++ N+ VI HVD GKST T L + ++
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII 46
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 297 VTIIDAXGHRDFI--KNMITGTSQADCAVLIVAA 392
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 27.9 bits (59), Expect = 6.6
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Frame = -1
Query: 482 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 324
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 323 VSXSINDGNI 294
S S +D I
Sbjct: 84 FSGSKSDAEI 93
>AC084196-7|AAK29949.2| 284|Caenorhabditis elegans Hypothetical
protein Y55D5A.6 protein.
Length = 284
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Frame = -1
Query: 332 EISVSXSINDGNIVLASFELPESNIDVIPSSRSAFSL------SNTQAYLK--DPLPISW 177
EI + I + ++L +F+LP+ ++ ++P+ + + +N Q L DP+ W
Sbjct: 38 EIGIENLIQEHELILGNFQLPKISMHILPAGEESLTTKTQNFEANEQKVLNVGDPIMFEW 97
>Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical
protein C38D4.8 protein.
Length = 190
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 44 GKEKTHINIVVIGHVDSGKSTTTGHLST 127
G K +NIVV+G +SGK+T L T
Sbjct: 12 GLGKKDVNIVVVGLDNSGKTTILNQLKT 39
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +3
Query: 255 IDIALWKFETSKYYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTG 401
+ I + Y + IID GH +F M AD V++V A G
Sbjct: 189 VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical protein
C23F12.1b protein.
Length = 2747
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Frame = +3
Query: 465 LGVKQLIVGVNKMDSLNHHT-----VSPDLRKSRRKYPHTSRRLATTQLLSLSCPFLDG 626
+G+K VGV + S+++ S ++R + P T +++ QLL PF+DG
Sbjct: 1822 IGLKNAPVGVEQQFSVDYTNSGASIASVEVRHGDQTIPITVKKMKPGQLLCTFTPFVDG 1880
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +3
Query: 255 IDIALWKFETSKYYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTG 401
+ I + Y + IID GH +F M AD V++V A G
Sbjct: 64 VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 65 NIVVIGHVDSGKSTTTGHL 121
NI VI HVD+GK+T T L
Sbjct: 27 NIGVIAHVDAGKTTVTERL 45
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,982,967
Number of Sequences: 27780
Number of extensions: 303007
Number of successful extensions: 908
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 899
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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