Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0332
(650 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 181 5e-48
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 181 5e-48
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 178 3e-47
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 175 3e-46
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 33 0.003
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 25 0.84
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 2.6
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 181 bits (441), Expect = 5e-48
Identities = 92/135 (68%), Positives = 100/135 (74%)
Frame = +3
Query: 246 GYHIDIALWKFETSKYYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 425
G IDIALWKFETSKYYVTIIDA GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK
Sbjct: 13 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 72
Query: 426 NGQTREHALLAFTLGVKQLIVGVNKMDSLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSL 605
NGQTREHALLAFTLGVKQLIVGVNKMDS + +++ +++
Sbjct: 73 NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVA 132
Query: 606 SCPFLDGTGDNMLEL 650
P GDNMLE+
Sbjct: 133 FVPISGWHGDNMLEV 147
Score = 25.0 bits (52), Expect = 0.63
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1
Query: 211 WVLDKLKAXRE 243
WVLDKLKA RE
Sbjct: 1 WVLDKLKAERE 11
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 181 bits (441), Expect = 5e-48
Identities = 92/135 (68%), Positives = 100/135 (74%)
Frame = +3
Query: 246 GYHIDIALWKFETSKYYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 425
G IDIALWKFETSKYYVTIIDA GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK
Sbjct: 70 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 129
Query: 426 NGQTREHALLAFTLGVKQLIVGVNKMDSLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSL 605
NGQTREHALLAFTLGVKQLIVGVNKMDS + +++ +++
Sbjct: 130 NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVA 189
Query: 606 SCPFLDGTGDNMLEL 650
P GDNMLE+
Sbjct: 190 FVPISGWHGDNMLEV 204
Score = 90.6 bits (215), Expect = 1e-20
Identities = 41/42 (97%), Positives = 41/42 (97%)
Frame = +1
Query: 118 LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAXRE 243
LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA RE
Sbjct: 27 LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Score = 58.4 bits (135), Expect = 6e-11
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHL 121
MGKEK HINIVVIGHVDSGKSTTTGHL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHL 27
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 178 bits (434), Expect = 3e-47
Identities = 90/131 (68%), Positives = 98/131 (74%)
Frame = +3
Query: 258 DIALWKFETSKYYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 437
DIALWKFETSKYYVTIIDA GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 438 REHALLAFTLGVKQLIVGVNKMDSLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCPF 617
REHALLAFTLGVKQLIVGVNKMDS + +++ +++ P
Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPI 120
Query: 618 LDGTGDNMLEL 650
GDNMLE+
Sbjct: 121 SGWHGDNMLEV 131
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 175 bits (426), Expect = 3e-46
Identities = 89/134 (66%), Positives = 98/134 (73%)
Frame = +3
Query: 246 GYHIDIALWKFETSKYYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 425
G IDIALWKFET+KYYVTIIDA GHRDFIKNMITGTSQADCAVLIVAAG GEFEAGISK
Sbjct: 70 GITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISK 129
Query: 426 NGQTREHALLAFTLGVKQLIVGVNKMDSLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSL 605
NGQTREHALLAFTLGVKQLIVGVNKMD + + +++ +++
Sbjct: 130 NGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKKIGYNTASVA 189
Query: 606 SCPFLDGTGDNMLE 647
P GDNMLE
Sbjct: 190 FVPISGWHGDNMLE 203
Score = 90.6 bits (215), Expect = 1e-20
Identities = 41/42 (97%), Positives = 41/42 (97%)
Frame = +1
Query: 118 LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAXRE 243
LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA RE
Sbjct: 27 LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Score = 58.4 bits (135), Expect = 6e-11
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHL 121
MGKEK HINIVVIGHVDSGKSTTTGHL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHL 27
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 32.7 bits (71), Expect = 0.003
Identities = 26/73 (35%), Positives = 33/73 (45%)
Frame = +3
Query: 297 VTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 476
VT +D GH FI G D VL+VAA G E QT + +A V
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV- 246
Query: 477 QLIVGVNKMDSLN 515
+IV +NK+D N
Sbjct: 247 PIIVAINKIDKPN 259
Score = 25.4 bits (53), Expect = 0.48
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 53 KTHINIVVIGHVDSGKST 106
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.6 bits (51), Expect = 0.84
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 62 INIVVIGHVDSGKSTTTGHLS 124
INI IGHV GKST +S
Sbjct: 43 INIGTIGHVAHGKSTIVKAIS 63
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 23.0 bits (47), Expect = 2.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 54 FSLPIFG*SRITNCV*Y 4
FSLPIFG I +C+ Y
Sbjct: 57 FSLPIFGTRWIFSCIGY 73
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,156
Number of Sequences: 438
Number of extensions: 3564
Number of successful extensions: 23
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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