Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0332
(650 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 151 5e-37
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 151 5e-37
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 151 5e-37
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 151 5e-37
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 98 5e-21
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 92 3e-19
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 66 2e-11
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 63 1e-10
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 38 0.008
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 38 0.008
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 35 0.041
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 35 0.054
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 31 0.66
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 31 0.88
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 31 0.88
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 29 2.0
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 29 2.0
At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein s... 28 4.7
At3g05470.1 68416.m00599 formin homology 2 domain-containing pro... 28 4.7
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 28 4.7
At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha s... 28 4.7
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 28 4.7
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 28 4.7
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 28 4.7
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 28 6.2
At1g62660.1 68414.m07071 beta-fructosidase (BFRUCT3) / beta-fruc... 28 6.2
At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329... 27 8.2
At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329... 27 8.2
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 27 8.2
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 27 8.2
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 27 8.2
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 151 bits (365), Expect = 5e-37
Identities = 71/88 (80%), Positives = 78/88 (88%)
Frame = +3
Query: 246 GYHIDIALWKFETSKYYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 425
G IDIALWKFET+KYY T+IDA GHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISK 129
Query: 426 NGQTREHALLAFTLGVKQLIVGVNKMDS 509
+GQTREHALLAFTLGVKQ+I NKMD+
Sbjct: 130 DGQTREHALLAFTLGVKQMICCCNKMDA 157
Score = 75.4 bits (177), Expect = 3e-14
Identities = 35/42 (83%), Positives = 36/42 (85%)
Frame = +1
Query: 118 LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAXRE 243
LIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKA RE
Sbjct: 27 LIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +2
Query: 509 TEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 625
T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+
Sbjct: 158 TTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGF 196
Score = 58.0 bits (134), Expect = 5e-09
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHL 121
MGKEK HINIVVIGHVDSGKSTTTGHL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHL 27
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 151 bits (365), Expect = 5e-37
Identities = 71/88 (80%), Positives = 78/88 (88%)
Frame = +3
Query: 246 GYHIDIALWKFETSKYYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 425
G IDIALWKFET+KYY T+IDA GHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISK 129
Query: 426 NGQTREHALLAFTLGVKQLIVGVNKMDS 509
+GQTREHALLAFTLGVKQ+I NKMD+
Sbjct: 130 DGQTREHALLAFTLGVKQMICCCNKMDA 157
Score = 75.4 bits (177), Expect = 3e-14
Identities = 35/42 (83%), Positives = 36/42 (85%)
Frame = +1
Query: 118 LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAXRE 243
LIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKA RE
Sbjct: 27 LIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +2
Query: 509 TEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 625
T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+
Sbjct: 158 TTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGF 196
Score = 58.0 bits (134), Expect = 5e-09
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHL 121
MGKEK HINIVVIGHVDSGKSTTTGHL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHL 27
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 151 bits (365), Expect = 5e-37
Identities = 71/88 (80%), Positives = 78/88 (88%)
Frame = +3
Query: 246 GYHIDIALWKFETSKYYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 425
G IDIALWKFET+KYY T+IDA GHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISK 129
Query: 426 NGQTREHALLAFTLGVKQLIVGVNKMDS 509
+GQTREHALLAFTLGVKQ+I NKMD+
Sbjct: 130 DGQTREHALLAFTLGVKQMICCCNKMDA 157
Score = 75.4 bits (177), Expect = 3e-14
Identities = 35/42 (83%), Positives = 36/42 (85%)
Frame = +1
Query: 118 LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAXRE 243
LIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKA RE
Sbjct: 27 LIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +2
Query: 509 TEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 625
T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+
Sbjct: 158 TTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGF 196
Score = 58.0 bits (134), Expect = 5e-09
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHL 121
MGKEK HINIVVIGHVDSGKSTTTGHL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHL 27
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 151 bits (365), Expect = 5e-37
Identities = 71/88 (80%), Positives = 78/88 (88%)
Frame = +3
Query: 246 GYHIDIALWKFETSKYYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 425
G IDIALWKFET+KYY T+IDA GHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISK 129
Query: 426 NGQTREHALLAFTLGVKQLIVGVNKMDS 509
+GQTREHALLAFTLGVKQ+I NKMD+
Sbjct: 130 DGQTREHALLAFTLGVKQMICCCNKMDA 157
Score = 75.4 bits (177), Expect = 3e-14
Identities = 35/42 (83%), Positives = 36/42 (85%)
Frame = +1
Query: 118 LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAXRE 243
LIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKA RE
Sbjct: 27 LIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +2
Query: 509 TEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 625
T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+
Sbjct: 158 TTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGF 196
Score = 58.0 bits (134), Expect = 5e-09
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHL 121
MGKEK HINIVVIGHVDSGKSTTTGHL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHL 27
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 97.9 bits (233), Expect = 5e-21
Identities = 46/87 (52%), Positives = 59/87 (67%)
Frame = +3
Query: 246 GYHIDIALWKFETSKYYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 425
G +++ FET TI+DA GH+ ++ NMI+G SQAD VL+++A GEFE G +
Sbjct: 164 GKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYER 223
Query: 426 NGQTREHALLAFTLGVKQLIVGVNKMD 506
GQTREH LA TLGV +LIV VNKMD
Sbjct: 224 GGQTREHVQLAKTLGVSKLIVVVNKMD 250
Score = 36.7 bits (81), Expect = 0.013
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +2
Query: 50 EKTHINIVVIGHVDSGKSTTTGHL 121
+K H+N+V IGHVD+GKST G +
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQI 121
Score = 33.9 bits (74), Expect = 0.094
Identities = 12/35 (34%), Positives = 25/35 (71%)
Frame = +1
Query: 118 LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 222
+++ G +D R I+K+EKEA++ + S+ A+++D
Sbjct: 121 ILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMD 155
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 92.3 bits (219), Expect = 3e-19
Identities = 43/101 (42%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
Frame = +3
Query: 246 GYHIDIALWKFETSKYYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 425
G + +A+ F + +++V ++D+ GH+DF+ NMI G +QAD A+L++ A G FEAG
Sbjct: 302 GITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDN 361
Query: 426 -NGQTREHALLAFTLGVKQLIVGVNKMDSLNHHTVSPDLRK 545
GQTREHA + GV+Q+IV +NKMD + + DL K
Sbjct: 362 LKGQTREHARVLRGFGVEQVIVAINKMDIVGYSKERFDLIK 402
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +1
Query: 118 LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAXRE 243
L++ G I ++ + K+EKEA+ GKGSF YAW LD+ RE
Sbjct: 259 LLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAEERE 300
Score = 34.3 bits (75), Expect = 0.071
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +2
Query: 56 THINIVVIGHVDSGKSTTTGHL 121
+ +N+ ++GHVDSGKST +G L
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRL 259
Score = 31.9 bits (69), Expect = 0.38
Identities = 12/43 (27%), Positives = 26/43 (60%)
Frame = +2
Query: 521 YSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHRRQHVGA 649
YS+ RF+ IK+ V S+++ + +++ ++P+S + V A
Sbjct: 393 YSKERFDLIKQHVGSFLQSCRFKDSSLTWIPLSAMENQNLVAA 435
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 66.1 bits (154), Expect = 2e-11
Identities = 34/90 (37%), Positives = 52/90 (57%)
Frame = +3
Query: 246 GYHIDIALWKFETSKYYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 425
G I+ A ++ET + +D GH D++KNMITG +Q D A+L+V+ G
Sbjct: 127 GITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP----- 181
Query: 426 NGQTREHALLAFTLGVKQLIVGVNKMDSLN 515
QT+EH LLA +GV ++V +NK D ++
Sbjct: 182 --QTKEHILLAKQVGVPDMVVFLNKEDQVD 209
Score = 35.9 bits (79), Expect = 0.023
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 38 KMGKEKTHINIVVIGHVDSGKSTTTGHLS 124
K ++K H+NI IGHVD GK+T T L+
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALT 100
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 63.3 bits (147), Expect = 1e-10
Identities = 34/87 (39%), Positives = 50/87 (57%)
Frame = +3
Query: 246 GYHIDIALWKFETSKYYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 425
G I A ++ET+K + +D GH D++KNMITG +Q D +L+V+ G
Sbjct: 115 GITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP----- 169
Query: 426 NGQTREHALLAFTLGVKQLIVGVNKMD 506
QT+EH LLA +GV L+ +NK+D
Sbjct: 170 --QTKEHILLARQVGVPSLVCFLNKVD 194
Score = 33.1 bits (72), Expect = 0.16
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 47 KEKTHINIVVIGHVDSGKSTTTGHLS 124
+ K H+N+ IGHVD GK+T T ++
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLTAAIT 88
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 37.5 bits (83), Expect = 0.008
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +3
Query: 282 TSKYYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 461
T + +V+ +D GH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 462 TLGVKQLIVGVNKMDSLN 515
+ +K +I+ NK+D +N
Sbjct: 178 MMRLKHIIILQNKIDLIN 195
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 37.5 bits (83), Expect = 0.008
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +3
Query: 282 TSKYYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 461
T + +V+ +D GH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 462 TLGVKQLIVGVNKMDSLN 515
+ +K +I+ NK+D +N
Sbjct: 178 MMRLKHIIILQNKIDLIN 195
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 35.1 bits (77), Expect = 0.041
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Frame = +3
Query: 276 FETSKY----YVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 443
FE SK +V+ +D GH + M+ G + D A+L++AA QT E
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSE 165
Query: 444 HALLAFTLGVKQLIVGVNKMDSLNHH 521
H + +K +I+ NK+D + +
Sbjct: 166 HLAAVEIMQLKHIIILQNKIDLIQEN 191
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 34.7 bits (76), Expect = 0.054
Identities = 21/76 (27%), Positives = 36/76 (47%)
Frame = +3
Query: 294 YVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 473
+V+ +D GH + M+ G + D A+LI+AA QT EH + +
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHL 173
Query: 474 KQLIVGVNKMDSLNHH 521
K +I+ NK+D + +
Sbjct: 174 KDIIIIQNKIDLIQEN 189
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 31.1 bits (67), Expect = 0.66
Identities = 27/93 (29%), Positives = 41/93 (44%)
Frame = +3
Query: 279 ETSKYYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 458
E S Y + +ID GH DF + S A+L+V A G QT + LA
Sbjct: 131 EASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG-------VQAQTVANFYLA 183
Query: 459 FTLGVKQLIVGVNKMDSLNHHTVSPDLRKSRRK 557
F + ++ +NK+D T P+ K++ K
Sbjct: 184 FEANL-TIVPVINKID---QPTADPERVKAQLK 212
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 30.7 bits (66), Expect = 0.88
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +3
Query: 255 IDIALWKFETSKYYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTG 401
+ + L + Y I+D GH +F M AD AVLIV A G
Sbjct: 197 MSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 30.7 bits (66), Expect = 0.88
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +3
Query: 255 IDIALWKFETSKYYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTG 401
+ + L + Y I+D GH +F M AD AVLIV A G
Sbjct: 197 MSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 297 VTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTG 401
+T +D GH F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 291 YYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTG 401
Y + +ID+ GH DF + T +D A+++V A G
Sbjct: 74 YSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 65 NIVVIGHVDSGKSTTTGHL 121
NI ++ HVD GK+T HL
Sbjct: 11 NICILAHVDHGKTTLADHL 29
>At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein
similar to 1,4-alpha-glucan branching enzyme [Solanum
tuberosum] GI:1621012, 1,4-alpha-glucan branching enzyme
(EC 2.4.1.18) from [Homo sapiens] SP|Q04446, {Solanum
tuberosum} SP|P30924; contains Pfam profiles: PF00128
Alpha amylase catalytic domain, PF02922 Isoamylase
N-terminal domain
Length = 777
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +2
Query: 524 SEPR---FEEIKKEVSSYIKKIGYNPAAVAFVP 613
SEP+ FEE K+V ++K+ GYN + VP
Sbjct: 257 SEPKVSTFEEFTKKVLPHVKRAGYNAIQLIGVP 289
>At3g05470.1 68416.m00599 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 884
Score = 28.3 bits (60), Expect = 4.7
Identities = 24/85 (28%), Positives = 36/85 (42%)
Frame = -1
Query: 389 SYDEHSAISLRGSCDHVLDEISVSXSINDGNIVLASFELPESNIDVIPSSRSAFSLSNTQ 210
S D+ S S+ G + +S + S + V +S E +D+ SRS F +S +
Sbjct: 308 SDDDESFHSVGGGSQYSNPRLSNASSASGSVNVGSSQRFSEHKLDIPECSRSDFGISVSA 367
Query: 209 AYLKDPLPISWASFSNFSMVRLSIP 135
P P FSN + LS P
Sbjct: 368 PPPPPPPPPPLPQFSNKRIHTLSSP 392
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +3
Query: 291 YYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 446
Y V IID GH DF + D A+L++ + G I+ + Q R +
Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184
>At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha
subunit, chloroplast / 60 kDa chaperonin alpha subunit /
CPN-60 alpha identical to SWISS-PROT:P21238- RuBisCO
subunit binding-protein alpha subunit, chloroplast
precursor (60 kDa chaperonin alpha subunit, CPN-60
alpha) [Arabidopsis thaliana]
Length = 586
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = -1
Query: 389 SYDEHSAISLRGSCDHVLDEISVSXSINDGNIVLASFELPESNIDVIPSSRSAFSLSN 216
++D+HS +L+ D + D + ++ N+VL F P+ D + +R A L N
Sbjct: 52 AFDQHSRAALQAGIDKLADCVGLTLGPRGRNVVLDEFGSPKVVNDGVTIAR-AIELPN 108
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 28.3 bits (60), Expect = 4.7
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +3
Query: 303 IIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 482
+ID GH F G+S D A+L+V + + G+ QT E +L + +
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DIKHGLEP--QTIE-SLNLLRMRNTEF 756
Query: 483 IVGVNKMDSL 512
I+ +NK+D L
Sbjct: 757 IIALNKVDRL 766
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +3
Query: 291 YYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 446
Y V IID GH DF + D A+L++ + G I+ + Q R +
Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 28.3 bits (60), Expect = 4.7
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +3
Query: 297 VTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 476
+ +ID GH F G++ D A+L+V + G+ QT E L VK
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV-----DIMRGLEP--QTIESLNLLRRRNVK 610
Query: 477 QLIVGVNKMDSL 512
I+ +NK+D L
Sbjct: 611 -FIIALNKVDRL 621
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2
Query: 53 KTHINIVVIGHVDSGKSTTT 112
K + NI ++ H+D+GK+TTT
Sbjct: 94 KDYRNIGIMAHIDAGKTTTT 113
>At1g62660.1 68414.m07071 beta-fructosidase (BFRUCT3) /
beta-fructofuranosidase / invertase, vacuolar identical
to beta-fructosidase GB:CAA67560 GI:1429209 [Arabidopsis
thaliana]; supported by full-length cDNA GI:14517549;
identical to cDNA Beta-fructosidase GI:3115854
Length = 648
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = -1
Query: 536 IWAHCMVVQ*IHFVYSYDELFDTEGESEQGMLTG-LTVLRDTSFEFTGTGSYDE 378
+W H + IH++Y + + G+ TG T L D S TGS DE
Sbjct: 148 VWGHAVSKDLIHWLYLPIAMVPDQWYDANGVWTGSATFLDDGSIVMLYTGSTDE 201
>At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 442
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 500 NGFTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 619
N TE + P+ E K E+S++I IG+ V F P S
Sbjct: 61 NVATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100
>At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 440
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 500 NGFTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 619
N TE + P+ E K E+S++I IG+ V F P S
Sbjct: 61 NVATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +3
Query: 276 FETSKYYVTIIDAXGHRDFIKNMITGTSQADCAVLIVAAGTG 401
+E + + + +ID GH DF + + + A+L+V A G
Sbjct: 147 YEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 27.5 bits (58), Expect = 8.2
Identities = 21/70 (30%), Positives = 33/70 (47%)
Frame = +3
Query: 303 IIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 482
+ID GH F G+S D A+L+V + G+ QT E +L + +
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DITHGLQP--QTIE-SLNLLRMRNTEF 164
Query: 483 IVGVNKMDSL 512
I+ +NK+D L
Sbjct: 165 IIALNKVDRL 174
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 27.5 bits (58), Expect = 8.2
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +3
Query: 303 IIDAXGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 482
+ID GH F G+S D A+L+V + G+ QT E +L + +
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DIMHGLEP--QTIE-SLNLLRMRNTEF 823
Query: 483 IVGVNKMDSL 512
IV +NK+D L
Sbjct: 824 IVALNKVDRL 833
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,275,036
Number of Sequences: 28952
Number of extensions: 287538
Number of successful extensions: 889
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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