Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0331
(566 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 1e-47
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 1e-47
SB_56| Best HMM Match : Actin (HMM E-Value=0) 186 1e-47
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 186 1e-47
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 1e-47
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 112 2e-25
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 3e-16
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 55 5e-08
SB_54| Best HMM Match : Actin (HMM E-Value=0) 54 1e-07
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 46 2e-05
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 44 9e-05
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 42 4e-04
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 40 0.001
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 33 0.16
SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.28
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 32 0.28
SB_59726| Best HMM Match : Keratin_B2 (HMM E-Value=5.9) 32 0.38
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.50
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.50
SB_146| Best HMM Match : DUF836 (HMM E-Value=1.5) 31 0.66
SB_4846| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_37346| Best HMM Match : Extensin_2 (HMM E-Value=0.62) 30 1.5
SB_20395| Best HMM Match : Extensin_2 (HMM E-Value=0.019) 30 1.5
SB_15927| Best HMM Match : fn2 (HMM E-Value=3.9) 29 2.0
SB_49724| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_43523| Best HMM Match : GRP (HMM E-Value=0.013) 29 3.5
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_30581| Best HMM Match : CX (HMM E-Value=0.73) 27 8.1
SB_25587| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 186 bits (452), Expect = 1e-47
Identities = 83/86 (96%), Positives = 84/86 (97%)
Frame = +3
Query: 255 GRPRHQGVMVGMGQKDSXVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 434
GRPRHQGVMVGMGQKDS VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 435 VAPEEHPVLLTEAPLNPKANREKMNR 512
VAPEEHPVLLTEAPLNPKANREKM +
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQ 122
Score = 74.1 bits (174), Expect = 7e-14
Identities = 34/39 (87%), Positives = 36/39 (92%)
Frame = +1
Query: 148 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVEGP 264
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIV P
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 39
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 482 PQGQQREDEQIMFETXNTPAMYVAIQAV 565
P+ + + QIMFET N+PAMYVAIQAV
Sbjct: 113 PKANREKMTQIMFETFNSPAMYVAIQAV 140
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 186 bits (452), Expect = 1e-47
Identities = 83/86 (96%), Positives = 84/86 (97%)
Frame = +3
Query: 255 GRPRHQGVMVGMGQKDSXVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 434
GRPRHQGVMVGMGQKDS VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 36 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 95
Query: 435 VAPEEHPVLLTEAPLNPKANREKMNR 512
VAPEEHPVLLTEAPLNPKANREKM +
Sbjct: 96 VAPEEHPVLLTEAPLNPKANREKMTQ 121
Score = 71.3 bits (167), Expect = 5e-13
Identities = 32/37 (86%), Positives = 35/37 (94%)
Frame = +1
Query: 154 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVEGP 264
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIV P
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 38
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 482 PQGQQREDEQIMFETXNTPAMYVAIQAV 565
P+ + + QIMFET N+PAMYVAIQAV
Sbjct: 112 PKANREKMTQIMFETFNSPAMYVAIQAV 139
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 186 bits (452), Expect = 1e-47
Identities = 83/86 (96%), Positives = 84/86 (97%)
Frame = +3
Query: 255 GRPRHQGVMVGMGQKDSXVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 434
GRPRHQGVMVGMGQKDS VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 36 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 95
Query: 435 VAPEEHPVLLTEAPLNPKANREKMNR 512
VAPEEHPVLLTEAPLNPKANREKM +
Sbjct: 96 VAPEEHPVLLTEAPLNPKANREKMTQ 121
Score = 72.5 bits (170), Expect = 2e-13
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +1
Query: 154 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVEGP 264
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV P
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 38
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 482 PQGQQREDEQIMFETXNTPAMYVAIQAV 565
P+ + + QIMFET N+PAMYVAIQAV
Sbjct: 112 PKANREKMTQIMFETFNSPAMYVAIQAV 139
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 186 bits (452), Expect = 1e-47
Identities = 83/86 (96%), Positives = 84/86 (97%)
Frame = +3
Query: 255 GRPRHQGVMVGMGQKDSXVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 434
GRPRHQGVMVGMGQKDS VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 435 VAPEEHPVLLTEAPLNPKANREKMNR 512
VAPEEHPVLLTEAPLNPKANREKM +
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQ 122
Score = 78.6 bits (185), Expect = 3e-15
Identities = 35/39 (89%), Positives = 37/39 (94%)
Frame = +1
Query: 148 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVEGP 264
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIV P
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 39
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 482 PQGQQREDEQIMFETXNTPAMYVAIQAV 565
P+ + + QIMFET N+PAMYVAIQAV
Sbjct: 113 PKANREKMTQIMFETFNSPAMYVAIQAV 140
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 186 bits (452), Expect = 1e-47
Identities = 83/86 (96%), Positives = 84/86 (97%)
Frame = +3
Query: 255 GRPRHQGVMVGMGQKDSXVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 434
GRPRHQGVMVGMGQKDS VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 435 VAPEEHPVLLTEAPLNPKANREKMNR 512
VAPEEHPVLLTEAPLNPKANREKM +
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQ 122
Score = 74.1 bits (174), Expect = 7e-14
Identities = 32/39 (82%), Positives = 36/39 (92%)
Frame = +1
Query: 148 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVEGP 264
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIV P
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRP 39
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 482 PQGQQREDEQIMFETXNTPAMYVAIQAV 565
P+ + + QIMFET N+PAMYVAIQAV
Sbjct: 113 PKANREKMTQIMFETFNSPAMYVAIQAV 140
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 112 bits (270), Expect = 2e-25
Identities = 51/55 (92%), Positives = 51/55 (92%)
Frame = +3
Query: 255 GRPRHQGVMVGMGQKDSXVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 419
GRPRHQGVMVGMGQKDS VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 36 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 72.5 bits (170), Expect = 2e-13
Identities = 32/37 (86%), Positives = 35/37 (94%)
Frame = +1
Query: 154 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVEGP 264
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIV P
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRP 38
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +2
Query: 506 EQIMFETXNTPAMYVAIQAV 565
E+IMFET N+PAMYVAIQAV
Sbjct: 83 EKIMFETFNSPAMYVAIQAV 102
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 82.2 bits (194), Expect = 3e-16
Identities = 37/71 (52%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Frame = +3
Query: 297 KDSXVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEA 473
KD VGDEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE
Sbjct: 53 KDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEP 112
Query: 474 PLNPKANREKM 506
PLNP NREKM
Sbjct: 113 PLNPMKNREKM 123
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +1
Query: 166 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVEGPAIRA*WSVWD 294
+ +V DNG+G K G+AG + P +FPS+V P IR+ V D
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGD 49
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 54.8 bits (126), Expect = 5e-08
Identities = 26/60 (43%), Positives = 33/60 (55%)
Frame = +3
Query: 285 GMGQKDSXVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 464
G+ D +GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/36 (66%), Positives = 29/36 (80%)
Frame = +3
Query: 399 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 506
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERM 2164
Score = 48.0 bits (109), Expect = 5e-06
Identities = 19/31 (61%), Positives = 25/31 (80%)
Frame = +1
Query: 172 LVVDNGSGMCKAGFAGDDAPRAVFPSIVEGP 264
+V+DNGSG CKAG + D++PR VFP+IV P
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRP 2127
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 482 PQGQQREDEQIMFETXNTPAMYVAIQAV 565
P+ + Q+MFE+ N P MYVA+QAV
Sbjct: 2157 PKMNRERMVQLMFESFNVPCMYVAVQAV 2184
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/36 (61%), Positives = 24/36 (66%)
Frame = +1
Query: 157 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVEGP 264
E LV+D GS M K GFAGDDAP+ VFP IV P
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRP 1389
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 44.0 bits (99), Expect = 9e-05
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +1
Query: 142 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVEGP 264
FK+ A+V+DNG G+ K GFAGD PR + P++V P
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNP 733
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +3
Query: 357 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 506
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKL 52
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +3
Query: 447 EHPVLLTEAPLNPKANREK 503
+HPVLLTEAPLNP+ NREK
Sbjct: 126 QHPVLLTEAPLNPRRNREK 144
Score = 30.3 bits (65), Expect = 1.1
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +2
Query: 482 PQGQQREDEQIMFETXNTPAMYVAIQAV 565
P+ + + ++ FET N PA+++++QAV
Sbjct: 138 PRRNREKAAEVFFETFNVPALFISMQAV 165
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = -3
Query: 252 DRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 154
D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 7 DGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 33.1 bits (72), Expect = 0.16
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +3
Query: 309 VGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 428
+GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 274 IGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 160 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVEGPAIR 273
++A LV+D G+ K GFA + APR++ +I + + R
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSIPNAIFKAKSER 269
>SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 32.7 bits (71), Expect = 0.22
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -3
Query: 141 LVKLVRCRCDKMKIKRPAVTANREKQIPIAGRCPCSTQC 25
L++L C C+K + KR + + Q+P C C C
Sbjct: 620 LLELTTCSCEKSRCKRDDLCPCKSNQMPCTEACQCMNTC 658
>SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1361
Score = 32.3 bits (70), Expect = 0.28
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -3
Query: 153 AHLELVKLVRCRCDKMKIKRPAVTANREKQIPIAGRCPCSTQ 28
A L L+KL CRC K +R + + + IP C C+++
Sbjct: 1296 APLSLLKLTTCRCVKTACRRDDLCSCKANDIPCTEACLCTSE 1337
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 32.3 bits (70), Expect = 0.28
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +2
Query: 512 IMFETXNTPAMYVAIQAV 565
IMFE N+PA+YVAIQAV
Sbjct: 1 IMFEAFNSPAVYVAIQAV 18
>SB_59726| Best HMM Match : Keratin_B2 (HMM E-Value=5.9)
Length = 319
Score = 31.9 bits (69), Expect = 0.38
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 290 HTDHHALMAGPSTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 147
H HH + P++ NTA SP K H P T+A T+++HI
Sbjct: 247 HCPHHPVQTLPTSARTNTAH--ISPCKHCPHQPVQTLPTSARTNTAHI 292
Score = 31.1 bits (67), Expect = 0.66
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 290 HTDHHALMAGPSTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 147
H HH + P++ NTA SP K H P T+A T+++HI
Sbjct: 222 HCPHHPVQTLPTSARTNTAH--ISPYKHCPHHPVQTLPTSARTNTAHI 267
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -1
Query: 290 HTDHHALMAGPSTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 147
H H + P++ NTA SP K H P T+A T+++HI
Sbjct: 197 HCPHQPVQTLPTSARANTAH--ISPYKHCPHHPVQTLPTSARTNTAHI 242
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -1
Query: 290 HTDHHALMAGPSTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 147
H H + P++ NTA SP K H P T+A T+++HI
Sbjct: 147 HCPHQPVQTLPTSARTNTAH--ISPYKHCPHQPVQTLPTSARTNTAHI 192
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.9 bits (69), Expect = 0.38
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Frame = +3
Query: 291 GQKDSX---VGDEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEH 452
G+ DS VG++ S I L+ P + +VT+++ E++ H F + P H
Sbjct: 108 GEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNH 167
Query: 453 PVLLTEAPLNPKANRE 500
PV++TE NP R+
Sbjct: 168 PVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.50
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 245 GNTARGASSPAKPALHIPEPLSTT 174
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.50
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 245 GNTARGASSPAKPALHIPEPLSTT 174
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_146| Best HMM Match : DUF836 (HMM E-Value=1.5)
Length = 554
Score = 31.1 bits (67), Expect = 0.66
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 239 CSPRSWKAPPSGRDGRYGTEGLXCR 313
C+PR W P R+GR T L CR
Sbjct: 274 CAPRQWLEPTEKREGREVTNKLRCR 298
>SB_4846| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 684
Score = 30.7 bits (66), Expect = 0.87
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 290 HTDHHALMAGPSTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 147
H HH + P++ NTA SP K H P T+A T+++HI
Sbjct: 366 HCPHHPVQTLPTSSRTNTAH--ISPYKHCPHQPVQTLPTSARTNTAHI 411
Score = 30.7 bits (66), Expect = 0.87
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -1
Query: 290 HTDHHALMAGPSTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 147
H HH + P++ NTA SP K H P T+A +++HI
Sbjct: 584 HCPHHPVQTLPTSARANTAH--ISPCKHCPHQPVQTLPTSARANTAHI 629
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -1
Query: 290 HTDHHALMAGPSTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 147
H HH + P++ NTA SP K H P T++ +++HI
Sbjct: 434 HRPHHPVQTLPTSASANTAH--ISPCKHCPHQPVQTPPTSSRANTAHI 479
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -1
Query: 290 HTDHHALMAGPSTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 147
H H + P++ NTA SP K H P T+A T+++HI
Sbjct: 316 HCSHQPVQTLPTSARTNTAH--ISPYKHCPHHPVQTLPTSARTNTAHI 361
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -1
Query: 290 HTDHHALMAGPSTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 147
H H + P++ NTA SP K H P T+A T+++HI
Sbjct: 534 HCPHQPVQTLPTSSRTNTAH--ISPYKHCPHHPVQTLPTSARTNTAHI 579
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 245 GNTARGASSPAKPALHIPEPLSTT 174
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_37346| Best HMM Match : Extensin_2 (HMM E-Value=0.62)
Length = 331
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 438 APEEHPVLLTEAPLNPKANREKMNRSCSKHXTRPPCTSP 554
APE +P + + NP+ R+ +H +PP T+P
Sbjct: 138 APEPNPHVDSATSRNPRGQRQSKKPRGQRHSKKPPWTAP 176
>SB_20395| Best HMM Match : Extensin_2 (HMM E-Value=0.019)
Length = 348
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 438 APEEHPVLLTEAPLNPKANREKMNRSCSKHXTRPPCTSP 554
APE +P + + NP+ R+ +H +PP T+P
Sbjct: 295 APEPNPHVDSATSRNPRGQRQSKKPRGQRHSKKPPWTAP 333
>SB_15927| Best HMM Match : fn2 (HMM E-Value=3.9)
Length = 343
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -1
Query: 290 HTDHHALMAGPSTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 147
H HH + P++ NTA P K H P T+A T+++HI
Sbjct: 21 HCPHHPVQTLPTSARANTAH--IIPYKHCPHQPVQTLPTSARTNTAHI 66
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -1
Query: 290 HTDHHALMAGPSTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 147
H H + P++ NTA SP K H P T+A T+++HI
Sbjct: 96 HCPHQPVQTLPTSARANTAH--ISPYKHCPHQPVQTLPTSARTNTAHI 141
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -1
Query: 290 HTDHHALMAGPSTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 147
H H + P++ NTA SP K H P T+A T+++HI
Sbjct: 196 HCPHQPVQTLPTSASVNTAH--ISPCKHCPHQPVQTLPTSARTNTAHI 241
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -1
Query: 290 HTDHHALMAGPSTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 147
H H + P++ NTA SP K H P T+A T+++HI
Sbjct: 121 HCPHQPVQTLPTSARTNTAH--ISPYKHCPHQPVQTLPTSARTNTAHI 166
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -1
Query: 290 HTDHHALMAGPSTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 147
H H + P++ NTA SP K H P T+A T+++HI
Sbjct: 146 HCPHQPVQTLPTSARTNTAH--ISPYKHCPHQPVQTLPTSARTNTAHI 191
>SB_49724| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 466
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 426 ELRVAPEEHPVLLTEAPLNPKANREKMNRSCSK 524
+L+ A EE+P LL EA P N +K C K
Sbjct: 39 QLKKALEENPHLLEEATCLPALNNQKSGLECKK 71
>SB_43523| Best HMM Match : GRP (HMM E-Value=0.013)
Length = 446
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 181 DNGSGMCKAGFAGDDAPRAVFPSIVEGPAIR 273
++GSG GF GDD AV + +GP ++
Sbjct: 344 EDGSGYDNGGFGGDDRAVAVDAKLDKGPQVK 374
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 245 GNTARGASSPAKPALHIPEPLSTT 174
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 245 GNTARGASSPAKPALHIPEPLSTT 174
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_30581| Best HMM Match : CX (HMM E-Value=0.73)
Length = 198
Score = 27.5 bits (58), Expect = 8.1
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -3
Query: 528 NVSNMICSSSLCW 490
N+S+M+CSS +CW
Sbjct: 136 NISSMLCSSLICW 148
>SB_25587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 202
Score = 27.5 bits (58), Expect = 8.1
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Frame = +3
Query: 348 LKYPIEHGIVTNWDDMEK--IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMNRSCS 521
+K+ +H TN + I T + LR PE P+ + P PK +R RS
Sbjct: 117 IKHQNKHSKETNKGHTNQVVIVQTTSFYALRTTPEPFPMEIRGVPSEPKLHRAFHERSRH 176
Query: 522 KHXTRPPCTSPFK 560
K + P P K
Sbjct: 177 KRQFQFPERQPEK 189
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,701,696
Number of Sequences: 59808
Number of extensions: 454740
Number of successful extensions: 1229
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1226
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1337207630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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