Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0331
(566 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 180 5e-46
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 180 5e-46
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 180 6e-46
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 180 6e-46
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 180 8e-46
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 180 8e-46
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 177 3e-45
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 177 3e-45
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 177 3e-45
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 167 3e-42
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 140 8e-34
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 130 8e-31
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 93 1e-19
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 71 4e-13
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 65 4e-11
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 65 4e-11
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 44 5e-05
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 37 0.011
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 36 0.019
At1g16690.2 68414.m01999 transcription factor-related similar to... 31 0.54
At1g16690.1 68414.m01998 transcription factor-related similar to... 31 0.54
At5g17960.1 68418.m02106 DC1 domain-containing protein contains ... 28 3.8
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 3.8
At2g22330.1 68415.m02649 cytochrome P450, putative similar to cy... 28 5.0
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 27 6.6
At2g44130.1 68415.m05489 kelch repeat-containing F-box family pr... 27 8.7
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 180 bits (439), Expect = 5e-46
Identities = 80/86 (93%), Positives = 83/86 (96%)
Frame = +3
Query: 255 GRPRHQGVMVGMGQKDSXVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 434
GRPRH GVMVGMGQKD+ VGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELR 97
Query: 435 VAPEEHPVLLTEAPLNPKANREKMNR 512
VAPEEHPVLLTEAPLNPKANREKM +
Sbjct: 98 VAPEEHPVLLTEAPLNPKANREKMTQ 123
Score = 60.1 bits (139), Expect = 1e-09
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +1
Query: 157 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVEGP 264
E++ LV DNG+GM KAGFAGDDAPRAVFPSIV P
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP 40
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +2
Query: 482 PQGQQREDEQIMFETXNTPAMYVAIQAV 565
P+ + + QIMFET N PAMYVAIQAV
Sbjct: 114 PKANREKMTQIMFETFNVPAMYVAIQAV 141
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 180 bits (439), Expect = 5e-46
Identities = 80/86 (93%), Positives = 83/86 (96%)
Frame = +3
Query: 255 GRPRHQGVMVGMGQKDSXVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 434
GRPRH GVMVGMGQKD+ VGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELR 97
Query: 435 VAPEEHPVLLTEAPLNPKANREKMNR 512
VAPEEHPVLLTEAPLNPKANREKM +
Sbjct: 98 VAPEEHPVLLTEAPLNPKANREKMTQ 123
Score = 60.1 bits (139), Expect = 1e-09
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +1
Query: 157 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVEGP 264
E++ LV DNG+GM KAGFAGDDAPRAVFPSIV P
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP 40
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +2
Query: 482 PQGQQREDEQIMFETXNTPAMYVAIQAV 565
P+ + + QIMFET NTPAMYVAIQAV
Sbjct: 114 PKANREKMTQIMFETFNTPAMYVAIQAV 141
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 180 bits (438), Expect = 6e-46
Identities = 80/86 (93%), Positives = 82/86 (95%)
Frame = +3
Query: 255 GRPRHQGVMVGMGQKDSXVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 434
GRPRH GVMVGMGQKD+ VGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELR 97
Query: 435 VAPEEHPVLLTEAPLNPKANREKMNR 512
VAPEEHPVLLTEAPLNPKANREKM +
Sbjct: 98 VAPEEHPVLLTEAPLNPKANREKMTQ 123
Score = 60.1 bits (139), Expect = 1e-09
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +1
Query: 157 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVEGP 264
E++ LV DNG+GM KAGFAGDDAPRAVFPSIV P
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP 40
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +2
Query: 482 PQGQQREDEQIMFETXNTPAMYVAIQAV 565
P+ + + QIMFET NTPAMYVAIQAV
Sbjct: 114 PKANREKMTQIMFETFNTPAMYVAIQAV 141
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 180 bits (438), Expect = 6e-46
Identities = 80/86 (93%), Positives = 82/86 (95%)
Frame = +3
Query: 255 GRPRHQGVMVGMGQKDSXVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 434
GRPRH GVMVGMGQKD+ VGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELR 97
Query: 435 VAPEEHPVLLTEAPLNPKANREKMNR 512
VAPEEHPVLLTEAPLNPKANREKM +
Sbjct: 98 VAPEEHPVLLTEAPLNPKANREKMTQ 123
Score = 60.1 bits (139), Expect = 1e-09
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +1
Query: 157 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVEGP 264
E++ LV DNG+GM KAGFAGDDAPRAVFPSIV P
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP 40
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +2
Query: 482 PQGQQREDEQIMFETXNTPAMYVAIQAV 565
P+ + + QIMFET NTPAMYVAIQAV
Sbjct: 114 PKANREKMTQIMFETFNTPAMYVAIQAV 141
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 180 bits (437), Expect = 8e-46
Identities = 79/86 (91%), Positives = 82/86 (95%)
Frame = +3
Query: 255 GRPRHQGVMVGMGQKDSXVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 434
GRPRH GVMVGMGQKD+ VGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELR 97
Query: 435 VAPEEHPVLLTEAPLNPKANREKMNR 512
VAPEEHP+LLTEAPLNPKANREKM +
Sbjct: 98 VAPEEHPILLTEAPLNPKANREKMTQ 123
Score = 60.1 bits (139), Expect = 1e-09
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +1
Query: 157 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVEGP 264
E++ LV DNG+GM KAGFAGDDAPRAVFPSIV P
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP 40
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +2
Query: 482 PQGQQREDEQIMFETXNTPAMYVAIQAV 565
P+ + + QIMFET N PAMYVAIQAV
Sbjct: 114 PKANREKMTQIMFETFNAPAMYVAIQAV 141
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 180 bits (437), Expect = 8e-46
Identities = 79/86 (91%), Positives = 82/86 (95%)
Frame = +3
Query: 255 GRPRHQGVMVGMGQKDSXVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 434
GRPRH GVMVGMGQKD+ VGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELR 97
Query: 435 VAPEEHPVLLTEAPLNPKANREKMNR 512
VAPEEHP+LLTEAPLNPKANREKM +
Sbjct: 98 VAPEEHPILLTEAPLNPKANREKMTQ 123
Score = 60.1 bits (139), Expect = 1e-09
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +1
Query: 157 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVEGP 264
E++ LV DNG+GM KAGFAGDDAPRAVFPSIV P
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP 40
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +2
Query: 482 PQGQQREDEQIMFETXNTPAMYVAIQAV 565
P+ + + QIMFET N PAMYVAIQAV
Sbjct: 114 PKANREKMTQIMFETFNAPAMYVAIQAV 141
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 177 bits (432), Expect = 3e-45
Identities = 77/86 (89%), Positives = 82/86 (95%)
Frame = +3
Query: 255 GRPRHQGVMVGMGQKDSXVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 434
GRPRH GVMVGM QKD+ VGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELR 97
Query: 435 VAPEEHPVLLTEAPLNPKANREKMNR 512
+APEEHPVLLTEAPLNPKANREKM +
Sbjct: 98 IAPEEHPVLLTEAPLNPKANREKMTQ 123
Score = 57.6 bits (133), Expect = 5e-09
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = +1
Query: 157 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVEGP 264
+++ +V DNG+GM KAGFAGDDAPRAVFPS+V P
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRP 40
Score = 40.3 bits (90), Expect = 9e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 482 PQGQQREDEQIMFETXNTPAMYVAIQAV 565
P+ + + QIMFET N+PAMYVAIQAV
Sbjct: 114 PKANREKMTQIMFETFNSPAMYVAIQAV 141
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 177 bits (432), Expect = 3e-45
Identities = 77/86 (89%), Positives = 82/86 (95%)
Frame = +3
Query: 255 GRPRHQGVMVGMGQKDSXVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 434
GRPRH GVMVGM QKD+ VGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELR 97
Query: 435 VAPEEHPVLLTEAPLNPKANREKMNR 512
+APEEHPVLLTEAPLNPKANREKM +
Sbjct: 98 IAPEEHPVLLTEAPLNPKANREKMTQ 123
Score = 57.6 bits (133), Expect = 5e-09
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = +1
Query: 157 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVEGP 264
+++ +V DNG+GM KAGFAGDDAPRAVFPS+V P
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRP 40
Score = 40.3 bits (90), Expect = 9e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 482 PQGQQREDEQIMFETXNTPAMYVAIQAV 565
P+ + + QIMFET N+PAMYVAIQAV
Sbjct: 114 PKANREKMTQIMFETFNSPAMYVAIQAV 141
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 177 bits (432), Expect = 3e-45
Identities = 77/86 (89%), Positives = 82/86 (95%)
Frame = +3
Query: 255 GRPRHQGVMVGMGQKDSXVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 434
GRPRH GVMVGM QKD+ VGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELR 97
Query: 435 VAPEEHPVLLTEAPLNPKANREKMNR 512
+APEEHPVLLTEAPLNPKANREKM +
Sbjct: 98 IAPEEHPVLLTEAPLNPKANREKMTQ 123
Score = 57.6 bits (133), Expect = 5e-09
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = +1
Query: 157 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVEGP 264
+++ +V DNG+GM KAGFAGDDAPRAVFPS+V P
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRP 40
Score = 40.3 bits (90), Expect = 9e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 482 PQGQQREDEQIMFETXNTPAMYVAIQAV 565
P+ + + QIMFET N+PAMYVAIQAV
Sbjct: 114 PKANREKMTQIMFETFNSPAMYVAIQAV 141
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 167 bits (407), Expect = 3e-42
Identities = 70/86 (81%), Positives = 81/86 (94%)
Frame = +3
Query: 255 GRPRHQGVMVGMGQKDSXVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 434
GRPRH+GVMVGM +KD+ VGDEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR
Sbjct: 39 GRPRHRGVMVGMDEKDTFVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELR 98
Query: 435 VAPEEHPVLLTEAPLNPKANREKMNR 512
+ PEEHP+LLTEAPLNPK NREKM +
Sbjct: 99 LEPEEHPILLTEAPLNPKVNREKMTQ 124
Score = 59.7 bits (138), Expect = 1e-09
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = +1
Query: 157 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVEGPAIR 273
+E A+V DNG+GM KAGFAGDDAPRAVFPS+V P R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHR 44
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 482 PQGQQREDEQIMFETXNTPAMYVAIQAV 565
P+ + + QIMFE+ P+MY+ IQAV
Sbjct: 115 PKVNREKMTQIMFESFAFPSMYIGIQAV 142
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 140 bits (338), Expect = 8e-34
Identities = 59/78 (75%), Positives = 71/78 (91%)
Frame = +3
Query: 279 MVGMGQKDSXVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 458
MVGM + D VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 459 LLTEAPLNPKANREKMNR 512
LLTEAPLNPKA+REKM +
Sbjct: 61 LLTEAPLNPKADREKMTQ 78
Score = 30.7 bits (66), Expect = 0.71
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 482 PQGQQREDEQIMFETXNTPAMYVAIQA 562
P+ + + QIMFET P+MY+ +QA
Sbjct: 69 PKADREKMTQIMFETFAVPSMYIGMQA 95
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 130 bits (313), Expect = 8e-31
Identities = 60/86 (69%), Positives = 67/86 (77%)
Frame = +3
Query: 255 GRPRHQGVMVGMGQKDSXVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 434
GRPR G+ +S VG+E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELR
Sbjct: 32 GRPRD-----GLNPNESYVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELR 86
Query: 435 VAPEEHPVLLTEAPLNPKANREKMNR 512
V PEEHPVLLTEAP NPKANREKM +
Sbjct: 87 VDPEEHPVLLTEAPYNPKANREKMTQ 112
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +1
Query: 172 LVVDNGSGMCKAGFAGDDAPRAVFPSIVEGP 264
+V D G GM +AGFAGD+AP+ VFP +V P
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRP 34
Score = 32.7 bits (71), Expect = 0.18
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +2
Query: 482 PQGQQREDEQIMFETXNTPAMYVAIQAV 565
P+ + + QIMFE+ + PAMYV++Q+V
Sbjct: 103 PKANREKMTQIMFESFDVPAMYVSMQSV 130
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 93.1 bits (221), Expect = 1e-19
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Frame = +3
Query: 255 GRP--RHQGVMVGMGQKDSXVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE 428
GRP R++ ++ KD VG+ R L + YP+ +GIV NWDDME +W H FYNE
Sbjct: 35 GRPLLRYEESLMEQQVKDIVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNE 94
Query: 429 LRVAPEEHPVLLTEAPLNPKANREKM 506
L++ P + +LLT+ PLNP NREKM
Sbjct: 95 LKINPSDCKILLTDPPLNPSKNREKM 120
Score = 41.9 bits (94), Expect = 3e-04
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +1
Query: 172 LVVDNGSGMCKAGFAGDDAPRAVFPSIVEGPAIR 273
+V DNG+G K GFAG++ P +VFP +V P +R
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLR 40
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 71.3 bits (167), Expect = 4e-13
Identities = 36/70 (51%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Frame = +3
Query: 300 DSXVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 470
D +GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LLTE
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTE 126
Query: 471 APLNPKANRE 500
+PL P +RE
Sbjct: 127 SPLTPPESRE 136
Score = 35.9 bits (79), Expect = 0.019
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 169 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 255
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 473 SPXPQGQQRE-DEQIMFETXNTPAMYVAIQAV 565
SP + RE +I+FET N P +Y+A+ +V
Sbjct: 127 SPLTPPESREYTGEILFETFNVPGLYIAVNSV 158
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 64.9 bits (151), Expect = 4e-11
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = +3
Query: 291 GQKDSXVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 467
G++ G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 468 EAPLNPKANREK 503
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
Score = 54.8 bits (126), Expect = 4e-08
Identities = 23/33 (69%), Positives = 30/33 (90%)
Frame = +1
Query: 157 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 255
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+V
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVV 37
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 64.9 bits (151), Expect = 4e-11
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Frame = +3
Query: 309 VGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP 485
VG +A S +R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN
Sbjct: 77 VGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNT 136
Query: 486 KANREK 503
+ REK
Sbjct: 137 QQQREK 142
Score = 54.4 bits (125), Expect = 5e-08
Identities = 22/33 (66%), Positives = 30/33 (90%)
Frame = +1
Query: 157 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 255
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVI 37
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 44.4 bits (100), Expect = 5e-05
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +3
Query: 348 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN-PKANR 497
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ P R
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQR 111
Score = 31.5 bits (68), Expect = 0.41
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 172 LVVDNGSGMCKAGFAGDDAPRAVFPSIVEGP 264
+V+DNG G+ KAG G+ P V P+ + P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 36.7 bits (81), Expect = 0.011
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +1
Query: 172 LVVDNGSGMCKAGFAGDDAPRAVFPSIVEGPAIRA 276
+V+DNG+ + G+AG+ PR VF +IV+ P +A
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKA 56
Score = 31.1 bits (67), Expect = 0.54
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Frame = +3
Query: 258 RPRHQGVMVGMGQKDSXVGDEAQSKRGILTL-----KYPIEHGIVTNWDDMEKIWHHTFY 422
RPRH+ G+ + VGD S + P + +V ++ ME I + F
Sbjct: 51 RPRHKAT----GETVTIVGDLDPSMMKYFDCTRSGPRSPFDSNVVYQFEIMEYILDYAFD 106
Query: 423 N-ELRVAPEEHPVLLTEAPLNPKANREKM 506
+ +HP+L+TE NP +R KM
Sbjct: 107 RLGANGSGIDHPILITECACNPVQSRSKM 135
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 35.9 bits (79), Expect = 0.019
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 357 PIEHGIVTNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANREKM 506
PIE G++ +WD ME + + Y L E +L T+ PKA RE++
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQL 107
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +1
Query: 169 ALVVDNGSGMCKAGFA-GDDAPRAVFPS 249
ALVVD GS KAG A D +P + PS
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPS 30
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 31.1 bits (67), Expect = 0.54
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = +3
Query: 315 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 494
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 495 REKMNR 512
REK +R
Sbjct: 225 REKAHR 230
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 31.1 bits (67), Expect = 0.54
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = +3
Query: 315 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 494
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 495 REKMNR 512
REK +R
Sbjct: 225 REKAHR 230
>At5g17960.1 68418.m02106 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 599
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -2
Query: 454 GCSSGATRSSL*-KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPTXESF 296
GC G T++ L C+ +S+ + TIP + Y + PL LC T + +
Sbjct: 454 GCKRGLTKNRLQCSTLCE-YSICYECATIPSELHYKYDKHPLTLCYGEDTDDKY 506
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 28.3 bits (60), Expect = 3.8
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -2
Query: 403 IFSMSSQLVTIPCSMGYLRVRIPLLLCASSPTXESFCPIPTIT 275
IFS SS+LVT P S+ +R R ++L SS + P +T
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSSSSGGGGKPTILVT 52
>At2g22330.1 68415.m02649 cytochrome P450, putative similar to
cytochrome P450 79B2 (SP:O81346) [Arabidopsis thaliana]
Length = 543
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -1
Query: 395 HVIPVSDDSVFDGVFEGQDTSFALCLISYXRVLLSH 288
HVIPV+ + +F+ QD FA ++Y + +LS+
Sbjct: 104 HVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSN 139
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 27.5 bits (58), Expect = 6.6
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 236 ARGASSPAKPALHIPEPLSTTNAATSS 156
A +SSPA+P + +P +ST + TS+
Sbjct: 306 ATSSSSPAEPLMPVPNDMSTAHRFTSN 332
>At2g44130.1 68415.m05489 kelch repeat-containing F-box family
protein very low similarity to SP|Q9ER30 Kelch-related
protein 1 (Sarcosin) {Rattus norvegicus}; contains Pfam
profiles PF01344: Kelch motif, PF00646: F-box domain
Length = 409
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/55 (23%), Positives = 21/55 (38%)
Frame = +3
Query: 243 PLDRGRPRHQGVMVGMGQKDSXVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIW 407
P+ GR QG VGMG + + +G I +W ++ +W
Sbjct: 233 PMTEGRDECQGFAVGMGLRFCVLSGYGTESQGRFRSDGEIYDPATDSWSRIDNVW 287
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,282,286
Number of Sequences: 28952
Number of extensions: 289320
Number of successful extensions: 824
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1092379416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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