Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0327
(638 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58746-2|AAB00622.2| 283|Caenorhabditis elegans Hypothetical pr... 83 2e-16
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr... 31 0.92
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ... 31 0.92
AC024813-5|AAK27883.1| 255|Caenorhabditis elegans Hypothetical ... 29 2.8
AC024813-4|AAK27882.1| 297|Caenorhabditis elegans Hypothetical ... 29 2.8
Z81066-1|CAB02970.1| 919|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z81554-1|CAB04506.1| 838|Caenorhabditis elegans Hypothetical pr... 28 6.5
X03044-1|CAA26849.1| 1603|Caenorhabditis elegans put. vitellogen... 28 6.5
U64852-2|ABH03524.1| 975|Caenorhabditis elegans Uncoordinated p... 28 6.5
U64852-1|AAB04966.2| 1041|Caenorhabditis elegans Uncoordinated p... 28 6.5
U00052-2|AAK95881.1| 404|Caenorhabditis elegans Hypothetical pr... 28 6.5
AF338767-1|AAL15621.1| 1041|Caenorhabditis elegans UNC-83 protein. 28 6.5
>U58746-2|AAB00622.2| 283|Caenorhabditis elegans Hypothetical
protein R05G6.7 protein.
Length = 283
Score = 82.6 bits (195), Expect = 2e-16
Identities = 36/77 (46%), Positives = 51/77 (66%)
Frame = +3
Query: 12 VEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVT 191
VEF S + N SGK+ G+L K+ + YG+T TEKWNT+N L T I + ++ GLKVT
Sbjct: 40 VEFKSAASHNIGSGKLGGNLDVKYKIPQYGITLTEKWNTENQLGTVIEVNEQFGRGLKVT 99
Query: 192 LEGTFAPQTGTKTGKLK 242
L+ +AP G ++GK+K
Sbjct: 100 LDSLYAPHAGKRSGKVK 116
Score = 59.3 bits (137), Expect = 2e-09
Identities = 24/70 (34%), Positives = 39/70 (55%)
Frame = +2
Query: 296 AGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGS 475
+ PV++ A V + GWL G FD+ K + + A G+ + + LH+ V N DFG S
Sbjct: 134 SAPVINAAGVFSRDGWLIGAAATFDSSSNKLAATSLAFGHSTPQYTLHSFVINSTDFGAS 193
Query: 476 IYQKVSDKLD 505
+Y KV+ ++
Sbjct: 194 LYHKVASNVE 203
>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical protein
T08A11.1 protein.
Length = 1872
Score = 30.7 bits (66), Expect = 0.92
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 63 GSLSSKFAVKDYGLTFTEKWNTDNTLATD 149
G+ S K+ V +G T EKWN D + TD
Sbjct: 1066 GNASKKYKVWAWGSTGEEKWNVDMEIGTD 1094
>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 30.7 bits (66), Expect = 0.92
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 63 GSLSSKFAVKDYGLTFTEKWNTDNTLATD 149
G+ S K+ V +G T EKWN D + TD
Sbjct: 1066 GNASKKYKVWAWGSTGEEKWNVDMEIGTD 1094
>AC024813-5|AAK27883.1| 255|Caenorhabditis elegans Hypothetical
protein Y54F10AL.1b protein.
Length = 255
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +3
Query: 12 VEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATDI 152
+E G+ S E+ K+F +S+ ++ + LTF +W + L T I
Sbjct: 184 LEGGGGVASQSETRKIF-LFTSRIFIEAFSLTFVAEWGDRSQLTTII 229
>AC024813-4|AAK27882.1| 297|Caenorhabditis elegans Hypothetical
protein Y54F10AL.1a protein.
Length = 297
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +3
Query: 12 VEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATDI 152
+E G+ S E+ K+F +S+ ++ + LTF +W + L T I
Sbjct: 184 LEGGGGVASQSETRKIF-LFTSRIFIEAFSLTFVAEWGDRSQLTTII 229
>Z81066-1|CAB02970.1| 919|Caenorhabditis elegans Hypothetical
protein F17B5.2 protein.
Length = 919
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +2
Query: 239 EDLIHHDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFS 391
+D++ + N+N D+ + VD A LNYQ W + F T K++
Sbjct: 381 DDILDRVHLRTNSNRDIVTSNMTVDDAIRLNYQ-WTVRDYVNFYTPTCKYA 430
>Z81554-1|CAB04506.1| 838|Caenorhabditis elegans Hypothetical
protein F57G4.1 protein.
Length = 838
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +3
Query: 57 VFGSLSSKFAVKDYGLTFTEKWNTDNTLATDI 152
VFG LSS DYG+T K+ TD I
Sbjct: 252 VFGELSSSKKTIDYGITKQWKYRTDGRFELSI 283
>X03044-1|CAA26849.1| 1603|Caenorhabditis elegans put. vitellogenin
protein.
Length = 1603
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -2
Query: 526 VHFM*RAVQLVRYLLVD*TAEIFTIVYVCVESKVTRLVT*SKVVLG 389
VH + RAV++ R ++ ++ T +Y E KV ++ S V G
Sbjct: 351 VHLIARAVRMFRMCTIEELKKVHTTIYTKAEKKVQLVIETSIAVAG 396
>U64852-2|ABH03524.1| 975|Caenorhabditis elegans Uncoordinated
protein 83, isoform b protein.
Length = 975
Score = 27.9 bits (59), Expect = 6.5
Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 4/116 (3%)
Frame = +2
Query: 233 KIEDLIHHDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKNNFALG 412
+IE+LI+H + ++ D DL GP + A + G T DT++++ + +
Sbjct: 159 RIEELINHQQASEDSESDPDLVGPPIKRARIRT-----VGHLTASDTEESEADEED---- 209
Query: 413 YQSGDFALHTNVDNGKDFGGSIYQKVSD---KLD-CASHEVDGGFGRHIIRSWSEV 568
S + T DN F + Y+ + D +D C S D + + W V
Sbjct: 210 RHSQTETVVTEDDNVLPFAENEYESIMDGRVTVDSCTSSSEDQMVEQSTNKKWESV 265
>U64852-1|AAB04966.2| 1041|Caenorhabditis elegans Uncoordinated
protein 83, isoform a protein.
Length = 1041
Score = 27.9 bits (59), Expect = 6.5
Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 4/116 (3%)
Frame = +2
Query: 233 KIEDLIHHDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKNNFALG 412
+IE+LI+H + ++ D DL GP + A + G T DT++++ + +
Sbjct: 225 RIEELINHQQASEDSESDPDLVGPPIKRARIRT-----VGHLTASDTEESEADEED---- 275
Query: 413 YQSGDFALHTNVDNGKDFGGSIYQKVSD---KLD-CASHEVDGGFGRHIIRSWSEV 568
S + T DN F + Y+ + D +D C S D + + W V
Sbjct: 276 RHSQTETVVTEDDNVLPFAENEYESIMDGRVTVDSCTSSSEDQMVEQSTNKKWESV 331
>U00052-2|AAK95881.1| 404|Caenorhabditis elegans Hypothetical
protein K02F3.6 protein.
Length = 404
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 479 YQKVSDKLDCASHEVDGGFGRHIIRSWSEVR 571
Y ++ DKL C + G F + I SWS+ R
Sbjct: 228 YPEMVDKLICCNIPRPGSFRKRIYTSWSQFR 258
>AF338767-1|AAL15621.1| 1041|Caenorhabditis elegans UNC-83 protein.
Length = 1041
Score = 27.9 bits (59), Expect = 6.5
Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 4/116 (3%)
Frame = +2
Query: 233 KIEDLIHHDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKNNFALG 412
+IE+LI+H + ++ D DL GP + A + G T DT++++ + +
Sbjct: 225 RIEELINHQQASEDSESDPDLVGPPIKRARIRT-----VGHLTASDTEESEADEED---- 275
Query: 413 YQSGDFALHTNVDNGKDFGGSIYQKVSD---KLD-CASHEVDGGFGRHIIRSWSEV 568
S + T DN F + Y+ + D +D C S D + + W V
Sbjct: 276 RHSQTETVVTEDDNVLPFAENEYESIMDGRVTVDSCTSSSEDQMVEQSTNKKWESV 331
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,378,747
Number of Sequences: 27780
Number of extensions: 301550
Number of successful extensions: 795
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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