Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0327
(638 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g01280.1 68416.m00035 porin, putative similar to SP|P42055 34... 36 0.030
At4g23240.1 68417.m03351 protein kinase family protein contains ... 32 0.37
At4g23130.2 68417.m03334 receptor-like protein kinase 6 (RLK6) i... 32 0.37
At4g23130.1 68417.m03333 receptor-like protein kinase 6 (RLK6) i... 32 0.37
At1g09730.1 68414.m01092 Ulp1 protease family protein low simila... 30 1.5
At3g13610.1 68416.m01713 oxidoreductase, 2OG-Fe(II) oxygenase fa... 29 2.0
At5g66310.1 68418.m08360 kinesin motor family protein contains P... 28 4.5
At2g04740.1 68415.m00484 ankyrin repeat family protein contains ... 28 6.0
At5g67500.1 68418.m08512 porin, putative similar to SP|P42055 34... 27 7.9
At4g23290.2 68417.m03357 protein kinase family protein contains ... 27 7.9
At4g23290.1 68417.m03356 protein kinase family protein contains ... 27 7.9
At3g17365.1 68416.m02219 expressed protein low similarity to PIR... 27 7.9
At2g03770.1 68415.m00337 sulfotransferase family protein similar... 27 7.9
>At3g01280.1 68416.m00035 porin, putative similar to SP|P42055 34
kDa outer mitochondrial membrane protein porin
(Voltage-dependent anion-selective channel protein)
(VDAC) {Solanum tuberosum}; contains Pfam profile
PF01459: Eukaryotic porin
Length = 276
Score = 35.5 bits (78), Expect = 0.030
Identities = 21/90 (23%), Positives = 38/90 (42%)
Frame = +2
Query: 233 KIEDLIHHDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKNNFALG 412
K+E H+ ++T++ L P V+ + V+ G FDT+ F+K N L
Sbjct: 105 KVELQYLHEYAGISTSMGLT-QNPTVNFSGVIGSNVLAVGTDVSFDTKSGNFTKINAGLS 163
Query: 413 YQSGDFALHTNVDNGKDFGGSIYQKVSDKL 502
+ D V++ D + Y + + L
Sbjct: 164 FTKEDLIASLTVNDKGDLLNASYYHIVNPL 193
>At4g23240.1 68417.m03351 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 352
Score = 31.9 bits (69), Expect = 0.37
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 LIHHDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKNNFALGY-QS 421
+IH D A N LD+D+ + D N++ T+ T + + Y +
Sbjct: 146 IIHRDLKAGNILLDVDMNPKIADFGVARNFR----VDQTEATTGRVVGTFGYMPPEYVAN 201
Query: 422 GDFALHTNVDNGKDFGGSIYQKVSDKLDCASHEVDGGFGRHIIRSW 559
G F++ ++V FG I + + K + HE+DG G + W
Sbjct: 202 GQFSMKSDV---YSFGVLILEIIVGKKSSSFHEIDGSVGNLVTYVW 244
>At4g23130.2 68417.m03334 receptor-like protein kinase 6 (RLK6)
identical to receptor-like protein kinase 6 [Arabidopsis
thaliana] GI:13506749; contains Pfam domain PF00069:
Protein kinase domain
Length = 663
Score = 31.9 bits (69), Expect = 0.37
Identities = 23/105 (21%), Positives = 47/105 (44%)
Frame = +2
Query: 245 LIHHDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKNNFALGYQSG 424
+IH D A N LD D+ V D ++ HT+ + +A+ G
Sbjct: 465 IIHRDLKAGNILLDADMNPKVADFGMARIFEIDQTEAHTRRVVGTYGYMSPEYAM---YG 521
Query: 425 DFALHTNVDNGKDFGGSIYQKVSDKLDCASHEVDGGFGRHIIRSW 559
F++ ++V + FG + + +S + + + +++D FG + +W
Sbjct: 522 QFSMKSDVYS---FGVLVLEIISGRKNSSLYQMDASFGNLVTYTW 563
>At4g23130.1 68417.m03333 receptor-like protein kinase 6 (RLK6)
identical to receptor-like protein kinase 6 [Arabidopsis
thaliana] GI:13506749; contains Pfam domain PF00069:
Protein kinase domain
Length = 659
Score = 31.9 bits (69), Expect = 0.37
Identities = 23/105 (21%), Positives = 47/105 (44%)
Frame = +2
Query: 245 LIHHDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKNNFALGYQSG 424
+IH D A N LD D+ V D ++ HT+ + +A+ G
Sbjct: 461 IIHRDLKAGNILLDADMNPKVADFGMARIFEIDQTEAHTRRVVGTYGYMSPEYAM---YG 517
Query: 425 DFALHTNVDNGKDFGGSIYQKVSDKLDCASHEVDGGFGRHIIRSW 559
F++ ++V + FG + + +S + + + +++D FG + +W
Sbjct: 518 QFSMKSDVYS---FGVLVLEIISGRKNSSLYQMDASFGNLVTYTW 559
>At1g09730.1 68414.m01092 Ulp1 protease family protein low
similarity to SP|Q9GZR1 SUMO-1-specific protease 1 (EC
3.4.22.-) (Sentrin-specific protease SENP6) (Protease
FKSG6) {Homo sapiens}; contains Pfam profile PF02902:
Ulp1 protease family, C-terminal catalytic domain
Length = 984
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +2
Query: 203 FCPTDWN*NWKIEDLIHHDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDT 373
F P ++N +W + + H VA T+LDLD + V + + + +G AG+ T
Sbjct: 534 FVPVNYNLHWSLIVICHPGEVANRTDLDLDDSKKVPCILHMDSIKGSHAGLKNLVQT 590
>At3g13610.1 68416.m01713 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to desacetoxyvindoline
4-hydroxylase [Catharanthus roseus][GI:1916643],
flavonol synthase 1 [SP|Q96330]; contains PF03171
2OG-Fe(II) oxygenase superfamily domain
Length = 361
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -2
Query: 178 PAAILSWIVMSVANVLSVFHFSVKVXP*SFTANLEERLPKTFPLSWLEVIPLVN-STPD 5
PA + ++V V + +K P + LEERL F E IP+++ S PD
Sbjct: 13 PAEVTDFVVYKGNGVKGLSETGIKALPEQYIQPLEERLINKFVNETDEAIPVIDMSNPD 71
>At5g66310.1 68418.m08360 kinesin motor family protein contains Pfam
domain, PF00225: Kinesin motor domain
Length = 1063
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 550 SELERSTRWTKTRLCTPKLTTSPSS 624
S+L R + T++R C P L +SPSS
Sbjct: 707 SQLFRGMKLTRSRSCRPSLLSSPSS 731
>At2g04740.1 68415.m00484 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 578
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -2
Query: 235 FPVLVPVCGAKVPSRVTLRPAAILSWIVMS-VANVLSVFHFSVKVXP*SFTANLE 74
FP+ V A +P T PA + W+V+S + VL + + + + +F A +E
Sbjct: 431 FPLKRAVADALLPHLETATPAELCQWLVLSDMYGVLKIREYCLDLVACNFEAFVE 485
>At5g67500.1 68418.m08512 porin, putative similar to SP|P42055 34
kDa outer mitochondrial membrane protein porin
(Voltage-dependent anion-selective channel protein)
(VDAC) {Solanum tuberosum}; contains Pfam profile
PF01459: Eukaryotic porin
Length = 276
Score = 27.5 bits (58), Expect = 7.9
Identities = 20/74 (27%), Positives = 29/74 (39%)
Frame = +2
Query: 215 DWN*NWKIEDLIHHDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSK 394
D+N + K+E HD V L P++D+ A L G +DT F+K
Sbjct: 100 DYN-SAKLEVQYFHDHATVTAAAALK-QNPLIDITATLGSPVISFGAEAGYDTTSKTFTK 157
Query: 395 NNFALGYQSGDFAL 436
N + D L
Sbjct: 158 YNAGISVTKPDACL 171
>At4g23290.2 68417.m03357 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 690
Score = 27.5 bits (58), Expect = 7.9
Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 LIHHDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKNNFALGY-QS 421
+IH D A N LD ++ + D N++ T+ +T + + Y +
Sbjct: 484 IIHRDLKASNILLDAEMNPKIADFGLARNFRV----NQTEANTGRVVGTFGYMPPEYVAN 539
Query: 422 GDFALHTNVDNGKDFGGSIYQKVSDKLDCASHEVDGGFGRHIIRSW 559
G F+ ++V + FG I + + K + + H++DG + W
Sbjct: 540 GQFSTKSDVYS---FGVLILEIIGGKKNSSFHQIDGSVSNLVTHVW 582
>At4g23290.1 68417.m03356 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 600
Score = 27.5 bits (58), Expect = 7.9
Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 LIHHDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKNNFALGY-QS 421
+IH D A N LD ++ + D N++ T+ +T + + Y +
Sbjct: 394 IIHRDLKASNILLDAEMNPKIADFGLARNFRV----NQTEANTGRVVGTFGYMPPEYVAN 449
Query: 422 GDFALHTNVDNGKDFGGSIYQKVSDKLDCASHEVDGGFGRHIIRSW 559
G F+ ++V + FG I + + K + + H++DG + W
Sbjct: 450 GQFSTKSDVYS---FGVLILEIIGGKKNSSFHQIDGSVSNLVTHVW 492
>At3g17365.1 68416.m02219 expressed protein low similarity to
PIR|I46078 endothelin converting enzyme from Bos
primigenius taurus
Length = 239
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -1
Query: 437 GEQSHQIGNLEQSCSWRTLLFVYQTGCVHQPANPGSLVLLQRLQLD 300
G +++ ++SCSW T L V QP + L + L LD
Sbjct: 159 GAPIYRLRLFKESCSWTTKLHVIDKSLTDQPLDTPKWELTKPLPLD 204
>At2g03770.1 68415.m00337 sulfotransferase family protein similar to
steroid sulfotransferase 3 [Brassica napus] GI:3420008;
contains Pfam profile PF00685: Sulfotransferase domain
Length = 324
Score = 27.5 bits (58), Expect = 7.9
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +2
Query: 506 CASHEVDGGFGRHIIRSWSEVRAGPRRV 589
C + G F H+++ W E R P++V
Sbjct: 190 CRGSSIYGPFWDHVLQYWKESRENPKKV 217
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,772,544
Number of Sequences: 28952
Number of extensions: 288531
Number of successful extensions: 881
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1314848736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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