Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0325
(687 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 161 9e-41
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 157 2e-39
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 136 4e-33
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 134 1e-32
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 120 2e-28
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 65 8e-12
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 59 5e-10
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 47 3e-06
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.21
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 30 0.36
SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr ... 28 1.1
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 27 1.9
SPCC550.03c |||RNA helicase involved in mRNA catabolism|Schizosa... 27 2.5
SPAC4G9.04c |||cleavage and polyadenylation specificity factor |... 27 2.5
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 25 7.8
SPBC25H2.05 |egd2|nac1|nascent polypeptide-associated complex al... 25 7.8
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 161 bits (391), Expect = 9e-41
Identities = 72/89 (80%), Positives = 81/89 (91%)
Frame = +3
Query: 3 ANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKH 182
ANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+NTIFDAKRLIGRKF+D VQ+DMKH
Sbjct: 28 ANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRKFDDPEVQSDMKH 87
Query: 183 WPFEVVSDGGKPKIKVAYKGEDKTFSPRK 269
WPF+V+S GKP ++V YKGE KTF+P +
Sbjct: 88 WPFKVISKDGKPVLQVEYKGETKTFTPEE 116
Score = 140 bits (340), Expect = 1e-34
Identities = 68/83 (81%), Positives = 74/83 (89%)
Frame = +2
Query: 260 PEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINE 439
PEE+SSMVL KM+ETAEAYLG V +AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINE
Sbjct: 114 PEEISSMVLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINE 173
Query: 440 PTAAAIAYGLDKKGTGERNVLIF 508
PTAAAIAYGLD+ GE NVLIF
Sbjct: 174 PTAAAIAYGLDRSNQGESNVLIF 196
Score = 99.1 bits (236), Expect = 5e-22
Identities = 44/55 (80%), Positives = 52/55 (94%)
Frame = +1
Query: 511 LGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVXEFKREITKKDL 675
LGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFD+R+VNHF+ EFKR+ KKD+
Sbjct: 198 LGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFIQEFKRK-NKKDI 251
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 157 bits (380), Expect = 2e-39
Identities = 70/89 (78%), Positives = 79/89 (88%)
Frame = +3
Query: 3 ANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKH 182
ANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+NTIFDAKRLIGR+F D VQ+DMKH
Sbjct: 28 ANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRRFNDPEVQSDMKH 87
Query: 183 WPFEVVSDGGKPKIKVAYKGEDKTFSPRK 269
WPF+V+ GKP I+V +KGE KTF+P +
Sbjct: 88 WPFKVIEKDGKPLIQVEFKGETKTFTPEE 116
Score = 134 bits (324), Expect = 1e-32
Identities = 65/83 (78%), Positives = 73/83 (87%)
Frame = +2
Query: 260 PEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINE 439
PEE+SSMVL KM+E+AEA+LG V +AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINE
Sbjct: 114 PEEISSMVLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINE 173
Query: 440 PTAAAIAYGLDKKGTGERNVLIF 508
PTAAAIAYGLD+ E NVLIF
Sbjct: 174 PTAAAIAYGLDRSNQHETNVLIF 196
Score = 97.9 bits (233), Expect = 1e-21
Identities = 44/55 (80%), Positives = 51/55 (92%)
Frame = +1
Query: 511 LGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVXEFKREITKKDL 675
LGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFD+R+VNHF EFKR+ KKD+
Sbjct: 198 LGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFAQEFKRK-NKKDI 251
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 136 bits (328), Expect = 4e-33
Identities = 62/90 (68%), Positives = 81/90 (90%)
Frame = +2
Query: 239 G*RQNLFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLN 418
G ++ PEE+S+M+L+KMK+TAEAYLGK V +AV+TVPAYFND+QRQATKDAGTI+GLN
Sbjct: 140 GKKKKFTPEEISAMILSKMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGLN 199
Query: 419 VLRIINEPTAAAIAYGLDKKGTGERNVLIF 508
V+RI+NEPTAAAIAYGLDK T E++++++
Sbjct: 200 VIRIVNEPTAAAIAYGLDKTDT-EKHIVVY 228
Score = 118 bits (285), Expect = 6e-28
Identities = 52/89 (58%), Positives = 68/89 (76%)
Frame = +3
Query: 3 ANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKH 182
ANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP NTIFD KRLIGRKF++ T+ D+K
Sbjct: 61 ANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENTIFDIKRLIGRKFDEKTMAKDIKS 120
Query: 183 WPFEVVSDGGKPKIKVAYKGEDKTFSPRK 269
+PF +V+D +P ++V G+ K F+P +
Sbjct: 121 FPFHIVNDKNRPLVEVNVGGKKKKFTPEE 149
Score = 78.2 bits (184), Expect = 1e-15
Identities = 31/49 (63%), Positives = 43/49 (87%)
Frame = +1
Query: 511 LGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVXEFKRE 657
LGGGTFDVS+L+I++G+FEV +T+GDTHLGGEDFDNR++N+ + R+
Sbjct: 230 LGGGTFDVSLLSIDNGVFEVLATSGDTHLGGEDFDNRVINYLARTYNRK 278
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 134 bits (324), Expect = 1e-32
Identities = 58/88 (65%), Positives = 72/88 (81%)
Frame = +3
Query: 6 NDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHW 185
NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP NT+FDAKRLIGR++ED Q D+KHW
Sbjct: 33 NDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRNTVFDAKRLIGRRYEDPETQKDIKHW 92
Query: 186 PFEVVSDGGKPKIKVAYKGEDKTFSPRK 269
PF+V+ + G P I+V Y GE K F+ ++
Sbjct: 93 PFKVIDNNGIPTIEVNYLGEKKQFTAQE 120
Score = 126 bits (305), Expect = 2e-30
Identities = 63/90 (70%), Positives = 73/90 (81%)
Frame = +2
Query: 239 G*RQNLFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLN 418
G ++ +E+S+MVLTKMKE +EA L K V+ AVITVPAYF+DSQR ATKDAG I+GLN
Sbjct: 111 GEKKQFTAQEISAMVLTKMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLN 170
Query: 419 VLRIINEPTAAAIAYGLDKKGTGERNVLIF 508
VLRIINEPTAAAIAYGLD K +NVLIF
Sbjct: 171 VLRIINEPTAAAIAYGLDAKSDKPKNVLIF 200
Score = 85.4 bits (202), Expect = 7e-18
Identities = 36/49 (73%), Positives = 43/49 (87%)
Frame = +1
Query: 511 LGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVXEFKRE 657
LGGGTFDVS+L I+ G+FEV +TAGDTHLGGEDFDN +V HF+ EFKR+
Sbjct: 202 LGGGTFDVSLLKIQGGVFEVLATAGDTHLGGEDFDNALVEHFIQEFKRK 250
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 120 bits (289), Expect = 2e-28
Identities = 53/73 (72%), Positives = 64/73 (87%)
Frame = +2
Query: 260 PEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINE 439
P ++ +L+KM+ETA YLGK V+NAV+TVPAYFNDSQRQATK AG I+GLNVLR++NE
Sbjct: 160 PSQIGGFILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVLRVVNE 219
Query: 440 PTAAAIAYGLDKK 478
PTAAA+AYGLDKK
Sbjct: 220 PTAAALAYGLDKK 232
Score = 81.0 bits (191), Expect = 1e-16
Identities = 42/88 (47%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = +3
Query: 3 ANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMK 179
AN +G RTTPS VAFT D ERL+G +AK Q +NP NT F KRLIGR+F++ VQ D+K
Sbjct: 76 ANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVINPENTFFATKRLIGRRFKEPEVQRDIK 135
Query: 180 HWPFEVVSDGGKPKIKVAYKGEDKTFSP 263
P+++V + KT+SP
Sbjct: 136 EVPYKIVEHSNG---DAWLEARGKTYSP 160
Score = 75.8 bits (178), Expect = 6e-15
Identities = 32/48 (66%), Positives = 39/48 (81%)
Frame = +1
Query: 511 LGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVXEFKR 654
LGGGTFD+SIL + +G+FEV+ST GDTHLGGEDFD +V H V FK+
Sbjct: 242 LGGGTFDISILELNNGVFEVRSTNGDTHLGGEDFDVALVRHIVETFKK 289
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 65.3 bits (152), Expect = 8e-12
Identities = 31/63 (49%), Positives = 45/63 (71%)
Frame = +2
Query: 287 TKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYG 466
TK+K AEA L +V + VI++PA+F D QR+A +A I+GLN LR++N+ AAA+ YG
Sbjct: 127 TKIKAIAEAELIGSVSDVVISIPAWFTDIQRRALLEAANIAGLNPLRLMNDNAAAALTYG 186
Query: 467 LDK 475
+ K
Sbjct: 187 ITK 189
Score = 54.0 bits (124), Expect = 2e-08
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +3
Query: 6 NDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQ-ADMKH 182
N+ NR+TPS V++ + R +G+AAK+ A N NT+ KRL GR ++D ++ +
Sbjct: 32 NEVSNRSTPSLVSYGERSRFLGEAAKSAEASNFRNTVGSLKRLAGRTYDDPEIKDIESNF 91
Query: 183 WPFEVVSDGGKPKIKVAYKGEDKTFS 260
++ G KV Y E+ FS
Sbjct: 92 ISAKLTEVDGFVGAKVQYLNEETAFS 117
Score = 41.1 bits (92), Expect = 1e-04
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 514 GGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVXEFKRE 657
G + VSI+ G F +KST D +LG + D ++++F EFK +
Sbjct: 207 GHSNYSVSIVEFSRGQFHIKSTVCDRNLGSRNMDKALIDYFAAEFKEK 254
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 59.3 bits (137), Expect = 5e-10
Identities = 31/92 (33%), Positives = 52/92 (56%)
Frame = +2
Query: 254 LFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRII 433
L E S L ++ E+AE +LG V V++VP YF D+QR+A + A +GL VL++I
Sbjct: 138 LTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANEAGLPVLQLI 197
Query: 434 NEPTAAAIAYGLDKKGTGERNVLIFTSAAVPS 529
++P A +A ++ ++ V++ A S
Sbjct: 198 HDPAAVILALMYSEEVLIDKTVVVANFGATRS 229
Score = 41.9 bits (94), Expect = 8e-05
Identities = 22/91 (24%), Positives = 49/91 (53%)
Frame = +3
Query: 3 ANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKH 182
AN++GNR PS +++ + G A+ Q+ N +N++ + + L+G+ ++ T+ H
Sbjct: 50 ANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNADNSVTNFRDLLGKSHDELTLH--HCH 107
Query: 183 WPFEVVSDGGKPKIKVAYKGEDKTFSPRKSV 275
+ V+ G+ K+ + ED+ P++ +
Sbjct: 108 YSANPVNVEGQIGFKITVQ-EDEESDPKEKI 137
Score = 37.1 bits (82), Expect = 0.002
Identities = 14/48 (29%), Positives = 30/48 (62%)
Frame = +1
Query: 514 GGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVXEFKRE 657
G +VS+++++ G+ + ++ D +LGGE + +VN F EF+++
Sbjct: 225 GATRSEVSVVSVKGGLMTILASVHDENLGGEQLTDVLVNFFAKEFEKK 272
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 46.8 bits (106), Expect = 3e-06
Identities = 28/101 (27%), Positives = 49/101 (48%)
Frame = +2
Query: 248 QNLFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLR 427
+N EE+ +M + AE + + + V+TVP +FN+ QR +A I +VL
Sbjct: 133 ENYSLEEIIAMTMEHYISLAEEMAHEKITDLVLTVPPHFNELQRSILLEAARILNKHVLA 192
Query: 428 IINEPTAAAIAYGLDKKGTGERNVLIFTSAAVPSTCPSLPS 550
+I++ A AI Y L + + + I + ST ++ S
Sbjct: 193 LIDDNVAVAIEYSLSRSFSTDPTYNIIYDSGSGSTSATVIS 233
Score = 26.6 bits (56), Expect = 3.4
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +3
Query: 21 RTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRK-FEDATVQADMKHWP 188
R S VAF ER+ G A N P ++I + K L+ E VQ +P
Sbjct: 55 RKEQSAVAFKGNERIFGVDASNLATRFPAHSIRNVKELLDTAGLESVLVQKYQSSYP 111
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 30.7 bits (66), Expect = 0.21
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = +2
Query: 443 TAAAIAYGLDKKGTGERNVLIFTSAAVPSTCPSLPSRMVSSR*NPPPATP 592
TAA I+ K GT FT+ P + P P+ S NPPPA P
Sbjct: 440 TAAKISSFNSKAGTSFAKPRPFTNNPNPISAPEKPTSGESLSLNPPPAMP 489
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 29.9 bits (64), Expect = 0.36
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +3
Query: 39 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKP 218
+ F+D E GD A + P + AK L+G+ + + D P++V+ D P
Sbjct: 125 IIFSDDEPYPGDVASRIYFLVPKFELPRAKELVGKNIDAKYITWDEDENPYQVLYDRLGP 184
Query: 219 KIKVAYKGEDKTF 257
+K+ G + F
Sbjct: 185 -LKLMIDGTVRNF 196
>SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 384
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 662 VISLLNSXTKWLTMRLSKSSPPKWVSPAVDF 570
V+ LN K++ SK P W+SPA DF
Sbjct: 252 VMKRLNYKNKFVNAWQSKVGPLPWMSPATDF 282
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 27.5 bits (58), Expect = 1.9
Identities = 22/77 (28%), Positives = 30/77 (38%), Gaps = 6/77 (7%)
Frame = +2
Query: 470 DKKGTGERNV----LIFTSAAVPSTCPSLPSRMVSSR*NPPPATPTWEVR--TLTIAWST 631
D K GE N+ I + P T S P S NPP + P +V + T+A ST
Sbjct: 53 DDKTVGEYNIKEQDFIVCMVSRPKTSTSTPKSAASPAPNPPASVPEKKVEAPSSTVAEST 112
Query: 632 TLXXSSRGKLPKRTFAT 682
+ + P T
Sbjct: 113 STTQTVAAAAPSNPDTT 129
>SPCC550.03c |||RNA helicase involved in mRNA
catabolism|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1213
Score = 27.1 bits (57), Expect = 2.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -1
Query: 549 DGKDGHVEGTAAEVKISTFRSPVPFLSR 466
D DGH+ T A + TF P P LS+
Sbjct: 28 DSFDGHLSITEATYDVDTFLKPSPALSK 55
>SPAC4G9.04c |||cleavage and polyadenylation specificity factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 638
Score = 27.1 bits (57), Expect = 2.5
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 506 FTSAAVPSTCPSLPSRMVSSR*NPPPATPTW 598
F ++PST P++PS +S + PP T ++
Sbjct: 295 FMKPSIPSTIPTIPSAYSASVSSQPPLTHSY 325
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 25.4 bits (53), Expect = 7.8
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
Frame = +2
Query: 341 VITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFT-SA 517
V TV Y S QA IS +IN PT A++ + + +F+ SA
Sbjct: 114 VQTVTEYVTLSCGQAFTSTVDISSSTSSSVINSPTGTAVSSQISTLSMSPSSTPVFSPSA 173
Query: 518 AVPSTCPSLPSRMVSSR*NPPPATPT 595
+V S S S + S + +T T
Sbjct: 174 SVSSKVASSVSYVSSEPSDSSSSTNT 199
>SPBC25H2.05 |egd2|nac1|nascent polypeptide-associated complex alpha
subunit Egd2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 25.4 bits (53), Expect = 7.8
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +2
Query: 269 VSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATK 391
++ ++ K A LGK + FN+SQ+QAT+
Sbjct: 57 INEPIVYKSSNNAYIVLGKVTVEDMAAQARAFNESQKQATE 97
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,921,426
Number of Sequences: 5004
Number of extensions: 60130
Number of successful extensions: 196
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 317927284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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