Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0324
         (708 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC082766-1|AAH82766.1|  407|Homo sapiens GPER protein protein.         33   1.3  
AY265808-1|AAP40321.1|   92|Homo sapiens LERGU1 protein.               33   1.3  
AY265807-1|AAP40320.1|   99|Homo sapiens LERGU protein.                33   1.3  
AY265809-1|AAP40322.1|  176|Homo sapiens LERGU2 protein.               32   1.7  
BC126236-1|AAI26237.1|  230|Homo sapiens Unknown (protein for MG...    30   9.3  
AK123348-1|BAC85589.1|  230|Homo sapiens protein ( Homo sapiens ...    30   9.3  

>BC082766-1|AAH82766.1|  407|Homo sapiens GPER protein protein.
          Length = 407

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = -3

Query: 262 LGHFSTCQRATRAKPC*GPKAHCPN*GKTNGIPPRIALLPSKTACLLT 119
           LG+ +T   A   + C  PKA  P   K +G  P   LLP+  AC  T
Sbjct: 337 LGNLTTGHLALLTQNCYNPKALAPQGPKASGDQPVTQLLPANPACRCT 384


>AY265808-1|AAP40321.1|   92|Homo sapiens LERGU1 protein.
          Length = 92

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = -3

Query: 262 LGHFSTCQRATRAKPC*GPKAHCPN*GKTNGIPPRIALLPSKTACLLT 119
           LG+ +T   A   + C  PKA  P   K +G  P   LLP+  AC  T
Sbjct: 29  LGNLTTGHLALLTQNCYNPKALAPQGPKASGDQPVTQLLPANPACRCT 76


>AY265807-1|AAP40320.1|   99|Homo sapiens LERGU protein.
          Length = 99

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = -3

Query: 262 LGHFSTCQRATRAKPC*GPKAHCPN*GKTNGIPPRIALLPSKTACLLT 119
           LG+ +T   A   + C  PKA  P   K +G  P   LLP+  AC  T
Sbjct: 29  LGNLTTGHLALLTQNCYNPKALAPQGPKASGDQPVTQLLPANPACRCT 76


>AY265809-1|AAP40322.1|  176|Homo sapiens LERGU2 protein.
          Length = 176

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = -3

Query: 262 LGHFSTCQRATRAKPC*GPKAHCPN*GKTNGIPPRIALLPSKTACLLT 119
           LG+ +T   A   + C  PKA  P   K +G  P   LLP+  AC  T
Sbjct: 29  LGNLTTGHLALFTQNCYNPKALAPQGPKASGDQPVTQLLPANPACRCT 76


>BC126236-1|AAI26237.1|  230|Homo sapiens Unknown (protein for
           MGC:161514) protein.
          Length = 230

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
 Frame = -3

Query: 259 GHFSTCQRATRAKPC*GPKAHCPN*GKTNG-IP---PRIALLPSKTACLLTNNCSWLFTL 92
           G +S+ +R  RA+    P+   P      G +P   P+ ALLP     L+   C W  T 
Sbjct: 18  GRYSSAERKRRARQPREPREQAPRVSAPPGRLPAFFPQFALLPQSGPRLILCTCEWAHTS 77

Query: 91  HDTTV 77
              T+
Sbjct: 78  SPGTI 82


>AK123348-1|BAC85589.1|  230|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41354 fis, clone BRAWH2014876. ).
          Length = 230

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
 Frame = -3

Query: 259 GHFSTCQRATRAKPC*GPKAHCPN*GKTNG-IP---PRIALLPSKTACLLTNNCSWLFTL 92
           G +S+ +R  RA+    P+   P      G +P   P+ ALLP     L+   C W  T 
Sbjct: 18  GRYSSAERKRRARQPREPREQAPRVSAPPGRLPAFFPQFALLPQSGPRLILCTCEWAHTS 77

Query: 91  HDTTV 77
              T+
Sbjct: 78  SPGTI 82


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,068,514
Number of Sequences: 237096
Number of extensions: 2280422
Number of successful extensions: 5728
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5728
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)