Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0324
(708 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060305-1|AAL25344.1| 297|Drosophila melanogaster GH14910p pro... 200 1e-51
AE014134-2388|AAF53325.1| 297|Drosophila melanogaster CG9008-PA... 200 1e-51
AE014134-2389|AAN10845.2| 191|Drosophila melanogaster CG9008-PB... 176 2e-44
AY094732-1|AAM11085.1| 651|Drosophila melanogaster GH25972p pro... 33 0.29
AE014296-2058|AAF49990.2| 651|Drosophila melanogaster CG5718-PA... 33 0.29
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l... 31 2.0
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot... 31 2.0
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p... 31 2.0
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,... 31 2.0
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,... 31 2.0
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,... 31 2.0
M38643-1|AAA28939.1| 549|Drosophila melanogaster protein ( D.me... 29 6.2
M22874-1|AAA28674.1| 583|Drosophila melanogaster nucleic acid-b... 29 6.2
>AY060305-1|AAL25344.1| 297|Drosophila melanogaster GH14910p
protein.
Length = 297
Score = 200 bits (488), Expect = 1e-51
Identities = 92/149 (61%), Positives = 117/149 (78%)
Frame = +2
Query: 257 PERLPSGDVEAVFSLMDDEFTRSMWHFQFRLTYRLILREKELHFNIGVYNPSKELTFSCQ 436
P+RL +GDVEA+FSLMD++FTRS+W++QFR+TYRLILREKELHF+IGVYNPSKEL+F+
Sbjct: 92 PDRLHNGDVEAIFSLMDNDFTRSIWNYQFRITYRLILREKELHFHIGVYNPSKELSFTFN 151
Query: 437 LLLHTYFKVPDVRRCQITGMHGCMSLTRTREGAVYQETRXVVTVGEWTDRILPEHDAGAH 616
+LLHTY KVPDVRRCQITG+ GC + +TRE A+YQE R VVTV EWTDRI +H H
Sbjct: 152 MLLHTYLKVPDVRRCQITGLQGCHFIDKTRENALYQEGREVVTVNEWTDRIY-QHTPQEH 210
Query: 617 HKRTLSAGGRCRITEVQLSPNTVIWXPLV 703
+ +G + R+ + P+TVIW P +
Sbjct: 211 VITNVVSGRKMRLHKYNF-PDTVIWNPWI 238
Score = 166 bits (404), Expect = 2e-41
Identities = 73/85 (85%), Positives = 79/85 (92%)
Frame = +3
Query: 6 MAATSVVVLDRGNNTTCTVNLFGATVVSWRVNNQEQLFVSKQAVFDGKRAIRGGIPFVFP 185
MAATSVVVLDRGNNTTCT+NL GATVVSWRVNNQEQLFVSK A FDGK+AIRGGIPFVFP
Sbjct: 8 MAATSVVVLDRGNNTTCTINLHGATVVSWRVNNQEQLFVSKLASFDGKKAIRGGIPFVFP 67
Query: 186 QFGQWAFGPQHGFARVARWHVEKCP 260
QFG W+FGPQHGFAR+ RWH+E+ P
Sbjct: 68 QFGAWSFGPQHGFARITRWHLERPP 92
>AE014134-2388|AAF53325.1| 297|Drosophila melanogaster CG9008-PA,
isoform A protein.
Length = 297
Score = 200 bits (488), Expect = 1e-51
Identities = 92/149 (61%), Positives = 117/149 (78%)
Frame = +2
Query: 257 PERLPSGDVEAVFSLMDDEFTRSMWHFQFRLTYRLILREKELHFNIGVYNPSKELTFSCQ 436
P+RL +GDVEA+FSLMD++FTRS+W++QFR+TYRLILREKELHF+IGVYNPSKEL+F+
Sbjct: 92 PDRLHNGDVEAIFSLMDNDFTRSIWNYQFRITYRLILREKELHFHIGVYNPSKELSFTFN 151
Query: 437 LLLHTYFKVPDVRRCQITGMHGCMSLTRTREGAVYQETRXVVTVGEWTDRILPEHDAGAH 616
+LLHTY KVPDVRRCQITG+ GC + +TRE A+YQE R VVTV EWTDRI +H H
Sbjct: 152 MLLHTYLKVPDVRRCQITGLQGCHFIDKTRENALYQEGREVVTVNEWTDRIY-QHTPQEH 210
Query: 617 HKRTLSAGGRCRITEVQLSPNTVIWXPLV 703
+ +G + R+ + P+TVIW P +
Sbjct: 211 VITNVVSGRKMRLHKYNF-PDTVIWNPWI 238
Score = 166 bits (404), Expect = 2e-41
Identities = 73/85 (85%), Positives = 79/85 (92%)
Frame = +3
Query: 6 MAATSVVVLDRGNNTTCTVNLFGATVVSWRVNNQEQLFVSKQAVFDGKRAIRGGIPFVFP 185
MAATSVVVLDRGNNTTCT+NL GATVVSWRVNNQEQLFVSK A FDGK+AIRGGIPFVFP
Sbjct: 8 MAATSVVVLDRGNNTTCTINLHGATVVSWRVNNQEQLFVSKLASFDGKKAIRGGIPFVFP 67
Query: 186 QFGQWAFGPQHGFARVARWHVEKCP 260
QFG W+FGPQHGFAR+ RWH+E+ P
Sbjct: 68 QFGAWSFGPQHGFARITRWHLERPP 92
>AE014134-2389|AAN10845.2| 191|Drosophila melanogaster CG9008-PB,
isoform B protein.
Length = 191
Score = 176 bits (429), Expect = 2e-44
Identities = 81/134 (60%), Positives = 103/134 (76%)
Frame = +2
Query: 302 MDDEFTRSMWHFQFRLTYRLILREKELHFNIGVYNPSKELTFSCQLLLHTYFKVPDVRRC 481
MD++FTRS+W++QFR+TYRLILREKELHF+IGVYNPSKEL+F+ +LLHTY KVPDVRRC
Sbjct: 1 MDNDFTRSIWNYQFRITYRLILREKELHFHIGVYNPSKELSFTFNMLLHTYLKVPDVRRC 60
Query: 482 QITGMHGCMSLTRTREGAVYQETRXVVTVGEWTDRILPEHDAGAHHKRTLSAGGRCRITE 661
QITG+ GC + +TRE A+YQE R VVTV EWTDRI +H H + +G + R+ +
Sbjct: 61 QITGLQGCHFIDKTRENALYQEGREVVTVNEWTDRIY-QHTPQEHVITNVVSGRKMRLHK 119
Query: 662 VQLSPNTVIWXPLV 703
P+TVIW P +
Sbjct: 120 YNF-PDTVIWNPWI 132
>AY094732-1|AAM11085.1| 651|Drosophila melanogaster GH25972p
protein.
Length = 651
Score = 33.5 bits (73), Expect = 0.29
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +1
Query: 421 DV*LSVAAPHLLQGAGRAPLSDHRHARLHVIDKNAGRCRVPG 546
DV +L G G PL DH H +LH ID + R+PG
Sbjct: 328 DVVARAMTMEVLAGNGCGPLKDHVHLQLHHIDAKIIKQRLPG 369
>AE014296-2058|AAF49990.2| 651|Drosophila melanogaster CG5718-PA
protein.
Length = 651
Score = 33.5 bits (73), Expect = 0.29
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +1
Query: 421 DV*LSVAAPHLLQGAGRAPLSDHRHARLHVIDKNAGRCRVPG 546
DV +L G G PL DH H +LH ID + R+PG
Sbjct: 328 DVVARAMTMEVLAGNGCGPLKDHVHLQLHHIDAKIIKQRLPG 369
>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
isoform protein.
Length = 5554
Score = 30.7 bits (66), Expect = 2.0
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = -3
Query: 508 HAAVHAGDLTAAHVRHLEVSVEQQLTAKRQLLAR-VVHADVEVELLLTQ---DQPVRQPK 341
H V AHV + E +++QQLT +Q +A+ HA +LLT +Q + QP+
Sbjct: 4847 HTTVRPPQPLKAHVLNREKNIQQQLTPTKQAVAQPPQHAPHSGHMLLTDTAGNQQLVQPQ 4906
Query: 340 LKVPH 326
+ H
Sbjct: 4907 IIARH 4911
>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
protein long isoformprotein.
Length = 5533
Score = 30.7 bits (66), Expect = 2.0
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = -3
Query: 508 HAAVHAGDLTAAHVRHLEVSVEQQLTAKRQLLAR-VVHADVEVELLLTQ---DQPVRQPK 341
H V AHV + E +++QQLT +Q +A+ HA +LLT +Q + QP+
Sbjct: 4853 HTTVRPPQPLKAHVLNREKNIQQQLTPTKQAVAQPPQHAPHSGHMLLTDTAGNQQLVQPQ 4912
Query: 340 LKVPH 326
+ H
Sbjct: 4913 IIARH 4917
>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
protein.
Length = 5476
Score = 30.7 bits (66), Expect = 2.0
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = -3
Query: 508 HAAVHAGDLTAAHVRHLEVSVEQQLTAKRQLLAR-VVHADVEVELLLTQ---DQPVRQPK 341
H V AHV + E +++QQLT +Q +A+ HA +LLT +Q + QP+
Sbjct: 4796 HTTVRPPQPLKAHVLNREKNIQQQLTPTKQAVAQPPQHAPHSGHMLLTDTAGNQQLVQPQ 4855
Query: 340 LKVPH 326
+ H
Sbjct: 4856 IIARH 4860
>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
isoform C protein.
Length = 5476
Score = 30.7 bits (66), Expect = 2.0
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = -3
Query: 508 HAAVHAGDLTAAHVRHLEVSVEQQLTAKRQLLAR-VVHADVEVELLLTQ---DQPVRQPK 341
H V AHV + E +++QQLT +Q +A+ HA +LLT +Q + QP+
Sbjct: 4796 HTTVRPPQPLKAHVLNREKNIQQQLTPTKQAVAQPPQHAPHSGHMLLTDTAGNQQLVQPQ 4855
Query: 340 LKVPH 326
+ H
Sbjct: 4856 IIARH 4860
>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
isoform B protein.
Length = 5533
Score = 30.7 bits (66), Expect = 2.0
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = -3
Query: 508 HAAVHAGDLTAAHVRHLEVSVEQQLTAKRQLLAR-VVHADVEVELLLTQ---DQPVRQPK 341
H V AHV + E +++QQLT +Q +A+ HA +LLT +Q + QP+
Sbjct: 4853 HTTVRPPQPLKAHVLNREKNIQQQLTPTKQAVAQPPQHAPHSGHMLLTDTAGNQQLVQPQ 4912
Query: 340 LKVPH 326
+ H
Sbjct: 4913 IIARH 4917
>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
isoform A protein.
Length = 5560
Score = 30.7 bits (66), Expect = 2.0
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = -3
Query: 508 HAAVHAGDLTAAHVRHLEVSVEQQLTAKRQLLAR-VVHADVEVELLLTQ---DQPVRQPK 341
H V AHV + E +++QQLT +Q +A+ HA +LLT +Q + QP+
Sbjct: 4853 HTTVRPPQPLKAHVLNREKNIQQQLTPTKQAVAQPPQHAPHSGHMLLTDTAGNQQLVQPQ 4912
Query: 340 LKVPH 326
+ H
Sbjct: 4913 IIARH 4917
>M38643-1|AAA28939.1| 549|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 549
Score = 29.1 bits (62), Expect = 6.2
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = -3
Query: 196 CPN*GKTNGIPPRIALLPSKTACLLTNNCSWLFTLHDTTVAPKRFTVHVVLLPL 35
CP NG+P ++ LP+K + NC F HD TV KR V LP+
Sbjct: 79 CPTTPYDNGLPTPLSSLPNKPS---KANCP--FQAHDRTVNRKRKGVSQPPLPI 127
>M22874-1|AAA28674.1| 583|Drosophila melanogaster nucleic
acid-binding protiein protein.
Length = 583
Score = 29.1 bits (62), Expect = 6.2
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = -3
Query: 196 CPN*GKTNGIPPRIALLPSKTACLLTNNCSWLFTLHDTTVAPKRFTVHVVLLPL 35
CP NG+P ++ LP+K + NC F HD TV KR V LP+
Sbjct: 113 CPTTPYDNGLPTPLSSLPNKPS---KANCP--FQAHDRTVNRKRKGVSQPPLPI 161
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,019,353
Number of Sequences: 53049
Number of extensions: 725271
Number of successful extensions: 1868
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1865
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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