Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0324
(708 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g01590.2 68416.m00090 aldose 1-epimerase family protein simil... 73 2e-13
At3g01590.1 68416.m00089 aldose 1-epimerase family protein simil... 73 2e-13
At5g14500.1 68418.m01698 aldose 1-epimerase family protein simil... 68 5e-12
At5g57330.1 68418.m07161 aldose 1-epimerase family protein conta... 68 7e-12
At4g25900.1 68417.m03724 aldose 1-epimerase family protein simil... 66 2e-11
At3g61610.1 68416.m06904 aldose 1-epimerase family protein simil... 63 2e-10
At4g23730.1 68417.m03414 aldose 1-epimerase family protein simil... 62 3e-10
At5g66530.1 68418.m08388 aldose 1-epimerase family protein simil... 60 1e-09
At5g66680.1 68418.m08406 dolichyl-diphosphooligosaccharide-prote... 30 1.3
At1g12570.1 68414.m01459 glucose-methanol-choline (GMC) oxidored... 29 3.0
At1g55350.4 68414.m06326 calpain-type cysteine protease family i... 27 9.2
At1g55350.3 68414.m06325 calpain-type cysteine protease family i... 27 9.2
At1g55350.2 68414.m06324 calpain-type cysteine protease family i... 27 9.2
At1g55350.1 68414.m06323 calpain-type cysteine protease family i... 27 9.2
>At3g01590.2 68416.m00090 aldose 1-epimerase family protein similar
to apospory-associated protein C; APOC [Chlamydomonas
reinhardtii] GI:6970044 Pfam profile PF01263: Aldose
1-epimerase
Length = 306
Score = 72.5 bits (170), Expect = 2e-13
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Frame = +3
Query: 15 TSVVVLDRGNNTTCTVNLFGATVVSWRVNNQEQL-FVSKQAVFDGKRAIRGGIPFVFPQF 191
+S ++L +T V LFG V+SW+ +E+L ++S +A + +AIRGGIP FPQF
Sbjct: 12 SSRIILTEPRGSTAEVLLFGGQVISWKNERREELLYMSSKAQYKPPKAIRGGIPVCFPQF 71
Query: 192 GQWAFGPQHGFARVARWHVEKCPSDCPAA 278
G + +HGFAR W ++ PS P A
Sbjct: 72 GNFGGLERHGFARNKFWSHDEDPSPLPPA 100
>At3g01590.1 68416.m00089 aldose 1-epimerase family protein similar
to apospory-associated protein C; APOC [Chlamydomonas
reinhardtii] GI:6970044 Pfam profile PF01263: Aldose
1-epimerase
Length = 306
Score = 72.5 bits (170), Expect = 2e-13
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Frame = +3
Query: 15 TSVVVLDRGNNTTCTVNLFGATVVSWRVNNQEQL-FVSKQAVFDGKRAIRGGIPFVFPQF 191
+S ++L +T V LFG V+SW+ +E+L ++S +A + +AIRGGIP FPQF
Sbjct: 12 SSRIILTEPRGSTAEVLLFGGQVISWKNERREELLYMSSKAQYKPPKAIRGGIPVCFPQF 71
Query: 192 GQWAFGPQHGFARVARWHVEKCPSDCPAA 278
G + +HGFAR W ++ PS P A
Sbjct: 72 GNFGGLERHGFARNKFWSHDEDPSPLPPA 100
>At5g14500.1 68418.m01698 aldose 1-epimerase family protein similar
to apospory-associated protein C, Chlamydomonas
reinhardtii, EMBL:AF195243 Pfam profile PF01263: Aldose
1-epimerase
Length = 306
Score = 68.1 bits (159), Expect = 5e-12
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Frame = +3
Query: 15 TSVVVLDRGNNTTCTVNLFGATVVSWRVNNQEQL-FVSKQAVFDGKRAIRGGIPFVFPQF 191
+S ++L +T V L+G VVSW+ +E+L ++S +A +AIRGG+P FPQF
Sbjct: 12 SSRILLTDPAGSTAEVLLYGGQVVSWKNERREKLLYMSTKAQLKPPKAIRGGLPISFPQF 71
Query: 192 GQWAFGPQHGFARVARWHVEKCPSDCPAA 278
G + +HGFAR W ++ PS P A
Sbjct: 72 GNFGALERHGFARNRFWSLDNDPSPLPPA 100
>At5g57330.1 68418.m07161 aldose 1-epimerase family protein contains
Pfam profile PF01263 Aldose 1-epimerase
Length = 312
Score = 67.7 bits (158), Expect = 7e-12
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 24 VVLDRGNNTTCTVNLFGATVVSWRVNNQEQLF-VSKQAVFDGKRAIRGGIPFVFPQFGQW 200
+VL + V L+G+ V SW+ N E+L +S +A+F + IRGGIP FPQF +
Sbjct: 20 IVLRESRGRSAEVYLYGSHVTSWKNENGEELLHLSSKAIFKPPKPIRGGIPLCFPQFSNF 79
Query: 201 AFGPQHGFARVARWHVEKCPSDCP 272
HGFAR W VE P P
Sbjct: 80 GTLESHGFARNRIWEVEANPPPLP 103
Score = 32.3 bits (70), Expect = 0.32
Identities = 27/116 (23%), Positives = 43/116 (37%), Gaps = 5/116 (4%)
Frame = +2
Query: 257 PERLPSGDVEAVFS---LMDDEFTRSMWHFQFRLTYRLIL-REKELHFNIGVYNPSKE-L 421
P LP + F L E +W F R+ L E EL + N + +
Sbjct: 99 PPPLPLNSCSSAFVDLILRPTEDDLKIWPNNFEFRLRIALGTEGELTLTSRIRNTNSDGK 158
Query: 422 TFSCQLLLHTYFKVPDVRRCQITGMHGCMSLTRTREGAVYQETRXVVTVGEWTDRI 589
F+ HTYF V D+ ++ G+ L ++ + E +T D+I
Sbjct: 159 PFTFTFAYHTYFSVSDISEVRVEGLETLDYLDNLKDRERFTEQGDAITFESEVDKI 214
>At4g25900.1 68417.m03724 aldose 1-epimerase family protein similar
to apospory-associated protein C; APOC [Chlamydomonas
reinhardtii] GI:6970044 Pfam profile PF01263: Aldose
1-epimerase
Length = 318
Score = 66.1 bits (154), Expect = 2e-11
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +3
Query: 21 VVVLDRGNNTTCTVNLFGATVVSWRVNNQEQLFV-SKQAVFDGKRAIRGGIPFVFPQFGQ 197
+++ DR + V L+G V SW+ N E+L V S +A+F IRGGIP +FPQ+
Sbjct: 43 IIIRDR-RGRSAEVYLYGGQVSSWKNENGEELLVMSSKAIFQPPTPIRGGIPVLFPQYSN 101
Query: 198 WAFGPQHGFARVARWHVEKCPSDCPA 275
P HGF R W VE P P+
Sbjct: 102 TGPLPSHGFVRQRFWEVETKPPPLPS 127
Score = 32.3 bits (70), Expect = 0.32
Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Frame = +2
Query: 326 MWHFQFRLTYRLIL-REKELHFNIGVYNPSKELTFSCQLLLHTYFKVPDVRRCQITGMHG 502
+W +F R+ L + +L V N + F+ LH YF V ++ + G+H
Sbjct: 146 IWPHKFEYRLRVALGHDGDLTLTSRVKNTDTK-PFNFTFALHPYFAVSNISEIHVEGLHN 204
Query: 503 CMSLTRTREGAVYQETRXVVTVGEWTDRI 589
L + + + + V+T DR+
Sbjct: 205 LDYLDQQKNRTRFTDHEKVITFNAQLDRL 233
>At3g61610.1 68416.m06904 aldose 1-epimerase family protein similar
to apospory-associated protein C; APOC [Chlamydomonas
reinhardtii] GI:6970044; contains Pfam profile PF01263:
Aldose 1-epimerase
Length = 317
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +3
Query: 24 VVLDRGNNTTCTVNLFGATVVSWRVN-NQEQLFVSKQAVFDGKRAIRGGIPFVFPQFGQW 200
V+L + + ++L G V+SWR +E LF S +A+F +++RGGI +PQFG
Sbjct: 26 VLLRNPHGASAKISLHGGQVISWRNELGEELLFTSNKAIFKPPKSMRGGIQICYPQFGDC 85
Query: 201 AFGPQHGFARVARWHVEKCP 260
QHGFAR W +++ P
Sbjct: 86 GSLDQHGFARNKIWVIDENP 105
>At4g23730.1 68417.m03414 aldose 1-epimerase family protein similar
to apospory-associated protein C; APOC [Chlamydomonas
reinhardtii] GI:6970044 Pfam profile PF01263: Aldose
1-epimerase
Length = 306
Score = 62.5 bits (145), Expect = 3e-10
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +3
Query: 15 TSVVVLDRGNNTTCTVNLFGATVVSWRVNN-QEQLFVSKQAVFDGKRAIRGGIPFVFPQF 191
T ++L + ++L G V+SW+ + E LF S +A +RGGIP FPQF
Sbjct: 24 TDQILLQNPRGASVKISLHGGQVLSWKTDKGDELLFNSTKANLKPPHPVRGGIPICFPQF 83
Query: 192 GQWAFGPQHGFARVARWHVEKCPSDCPA 275
G QHGFAR W VE P P+
Sbjct: 84 GTRGSLEQHGFARNKMWLVENNPPALPS 111
Score = 35.9 bits (79), Expect = 0.026
Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 9/156 (5%)
Frame = +2
Query: 257 PERLPSGDV--EAVFSLM---DDEFTRSMWHFQFRLTYRLILR-EKELHFNIGVYNPSKE 418
P LPS D +A L+ DE T +W + F R+ L + L V N + +
Sbjct: 106 PPALPSFDSTGKAYVDLVLKSSDEDTMRIWPYSFEFHLRVSLALDGNLTLISRVRNINSK 165
Query: 419 LTFSCQLLLHTYFKVPDVRRCQITGMHGCMSLTRTREGAVYQETRXVVTVGEWTDRI-LP 595
FS + HTYF + D+ ++ G+ L + + E +T DR+ L
Sbjct: 166 -PFSFSIAYHTYFSISDISEVRLEGLETLDYLDNMHDRERFTEQGDALTFESEIDRVYLN 224
Query: 596 EHDAGA--HHKRTLSAGGRCRITEVQLSPNTVIWXP 697
D A H+R R + + + P+ V+W P
Sbjct: 225 SKDVVAIFDHERK-----RTFLIKKEGLPDVVVWNP 255
>At5g66530.1 68418.m08388 aldose 1-epimerase family protein similar
to apospory-associated protein C; APOC [Chlamydomonas
reinhardtii] GI:6970044; contains Pfam profile PF01263:
Aldose 1-epimerase
Length = 307
Score = 60.5 bits (140), Expect = 1e-09
Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +3
Query: 24 VVLDRGNNTTCTVNLFGATVVSWRV-NNQEQLFVSKQAVFDGKRAIRGGIPFVFPQFGQW 200
+VL N+ + LFG + SW+V + ++ LFV AVF+ + I GGIP FPQFG
Sbjct: 48 LVLTSPQNSEAEIYLFGGCITSWKVASGKDLLFVRPDAVFNKIKPISGGIPHCFPQFGPG 107
Query: 201 AFGPQHGFARVARWHV 248
QHGF R W V
Sbjct: 108 LI-QQHGFGRNMDWSV 122
>At5g66680.1 68418.m08406 dolichyl-diphosphooligosaccharide-protein
glycosyltransferase 48kDa subunit family protein similar
to SP|Q05052 Dolichyl-diphosphooligosaccharide--protein
glycosyltransferase 48 kDa subunit precursor (EC
2.4.1.119) (Oligosaccharyl transferase 48 kDa subunit)
{Canis familiaris}; contains Pfam profile PF03345:
Dolichyl-diphosphooligosaccharide-protein
glycosyltransferase 48kD subunit
Length = 437
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +2
Query: 254 VPERLPSGDVEAVFSLMDD-EFTRSMWHFQFRLTYRLILREKELHFNIGVYNPSKELTFS 430
V R+ D A++ + DD EF+ ++ + + + + ++ F + K L+
Sbjct: 298 VHHRVGETDEPAIYRIKDDLEFSVEIYEWSGKSWEPYVANDVQVQFYMMSPYVLKTLSTD 357
Query: 431 CQLLLHTYFKVPDV 472
+ L HT FKVPDV
Sbjct: 358 KKGLFHTSFKVPDV 371
>At1g12570.1 68414.m01459 glucose-methanol-choline (GMC)
oxidoreductase family protein similar to mandelonitrile
lyase from Prunus serotina [SP|P52706, SP|P52707];
contains Pfam profile PF00732 GMC oxidoreductase
Length = 572
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Frame = +3
Query: 18 SVVVLDRG----NNTTCT-VNLFGATVVSWRVNNQEQLFVSKQAVFDGKRAIRGG 167
SV++L+RG NN T ++ FGA + ++ Q FVS+ V + + + GG
Sbjct: 69 SVLLLERGDSPYNNPNITRLSAFGAALSDLSESSPSQRFVSEDGVINARARVLGG 123
>At1g55350.4 68414.m06326 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 376 GAPLQHRRVQPEQGADV*LSVAAPHLLQGAGRAPLSDHRHARLHVID 516
G PL EQGA+V L V P + GR+ SD +++H++D
Sbjct: 1526 GLPLSIGSAIWEQGAEVWLGVRPPIDVDAFGRSD-SDGVESKMHIMD 1571
>At1g55350.3 68414.m06325 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 376 GAPLQHRRVQPEQGADV*LSVAAPHLLQGAGRAPLSDHRHARLHVID 516
G PL EQGA+V L V P + GR+ SD +++H++D
Sbjct: 1526 GLPLSIGSAIWEQGAEVWLGVRPPIDVDAFGRSD-SDGVESKMHIMD 1571
>At1g55350.2 68414.m06324 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 376 GAPLQHRRVQPEQGADV*LSVAAPHLLQGAGRAPLSDHRHARLHVID 516
G PL EQGA+V L V P + GR+ SD +++H++D
Sbjct: 1526 GLPLSIGSAIWEQGAEVWLGVRPPIDVDAFGRSD-SDGVESKMHIMD 1571
>At1g55350.1 68414.m06323 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 376 GAPLQHRRVQPEQGADV*LSVAAPHLLQGAGRAPLSDHRHARLHVID 516
G PL EQGA+V L V P + GR+ SD +++H++D
Sbjct: 1526 GLPLSIGSAIWEQGAEVWLGVRPPIDVDAFGRSD-SDGVESKMHIMD 1571
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,425,461
Number of Sequences: 28952
Number of extensions: 315315
Number of successful extensions: 848
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1526202912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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